Anoplopoma fimbria (sablefish): 129092136
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Entry
129092136 CDS
T09102
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04330
Notch signaling pathway
afb04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129092136
04371 Apelin signaling pathway
129092136
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afb04090
]
129092136
CD molecules [BR:
afb04090
]
Proteins
129092136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
DSL
EGF_2
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
cEGF
DAG1
EGF_3
Glycophorin_A
Stevor
Glt_symporter
Motif
Other DBs
NCBI-GeneID:
129092136
NCBI-ProteinID:
XP_054455918
LinkDB
All DBs
Position
6:18026486..18053082
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AA seq
1216 aa
AA seq
DB search
MILRRGSVVAAFLLCFLAKVSEGSGQFELQILSMHNVNGELLSGMCCDGSRNTADRKCTR
DECDTFFKVCLKEYQSRVSAAGPCSFGMGSTPVLGGNTFSFKSSVRNDKSRIVLAFSFAW
PRSYTLIVEALDSNNETSGADGRLIEKASHSGMINPSLHWQKLTHNGPVAQFEYQIRVSC
DEHYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGPDCNTAICRQGCSTEHGSCKE
PGGCKCLYGWQGQYCDKCIPHPGCVHGTCVEPWQCLCDTNWGGHLCDKDLNYCGTHQPCL
NGGTCINTGPDKYQCTCAEGYSGANCERAEHACLSNPCSNGGSCSETSQGYECQCAPGWS
GPSCTINVDDCSPNPCNHGGTCQDLVNGFKCHCPSQWTGKTCLIDANECESKPCVNANSC
RNLIGGYFCECVPGWTGQNCDIDINDCKDQCQNGGTCKDLVNSYRCACPPGFAGEHCERD
IDECASAPCLNGGRCQDEVNSFQCLCLAGFSGNLCQLDIDYCSPNPCQNGAPCFNLATDY
FCACPEDYEGKNCSHLKDHCRITTCKVIDSCTVAVASNSTPGGERYISSNVCGPHGRCRS
QAGGQFSCECQEGFRGTYCHENINDCESNPCSNGGTCIDKVSVYQCICGDGWEGDHCEIN
IDDCSTNPCHNGGTCRDLVTDFFCECKNGWKGKTCHSRESQCDGATCNNGGICHDEVDTF
QCKCSPGWEGTTCNIAKNSSCLPNPCENGGTCVVTGESFTCVCKEGWEGPTCTQNTNDCS
PHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGSSCVDEINGYRCLCP
PDRTGPHCQEVTRKPCSVNGHVTPDGLKWDEDCNTCHCSNGKVACTKMWCGPTSCHLGAK
GRGGCPSGQSCIPIREGHCFVKPCLGFGECWRSNPPPHPTKCHPSSSYQDNSCANITFTF
NKETMPQSLTVEDVCKQLRRLYVVKNFSSEHSVSITCDPSFSASNEIHVCISTEDHCLDR
SPVKEITDRIIDLVSKRNGNNTIIAAIVEVRVPSSSKTDFLVPLLSSIFIVIWVLVLVSI
FLWCMRRRRKQSNHNGTPAAGAEDNTTNNVREQLNQIKNPIEKHVGLTVAIKDYENKNSI
IAKIRTNHPEGDEDDKERHIQKGRFAKQPAYTLVERDEKTPISNTNPTSKHPNWTNKQDN
RDLETANSINRVDYIV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgattctgagacggggctcagtcgttgctgcctttttgctctgctttctggcgaaggtg
tcagagggatcgggacaattcgagttgcaaatcctatcgatgcacaatgtgaacggagag
ctgctgagcggcatgtgctgcgacggctcgcggaacacggcggatagaaaatgcacacgg
gacgagtgcgacacgtttttcaaagtttgcctgaaggaataccagtcgagggtttccgcc
gcggggccctgcagcttcggaatgggatctacgcctgtcctcggagggaataccttttct
ttcaagagctctgtcaggaatgacaaatccaggatagttttggccttcagttttgcctgg
ccgaggtcctacactttgatagtggaagcgttggactcaaacaatgaaaccagcggtgca
gatgggaggttgatagagaaagcctctcattccggcatgatcaaccccagcctgcattgg
cagaagctgactcacaacggccccgtggcccagtttgagtaccagatccgggtcagctgt
gacgagcactattatggctttggctgcaacaagttttgtcggcccagggatgagttcttc
gggcattacacatgcgattacaatgggaacaagacctgtctggaaggctggtctggacct
gactgcaacacagctatatgtcgacaaggctgcagcactgaacatggatcatgtaaggag
ccaggtggatgcaagtgtctgtatggctggcagggccagtactgtgacaagtgcatcccc
caccccggctgtgtacatgggacctgtgttgagccctggcagtgcctgtgcgacaccaac
tggggcggccatctttgcgataaagatctgaactactgtggaactcatcagccatgcctg
aatggagggacatgtatcaacacaggacctgacaagtaccagtgtacctgcgctgagggc
tactctggagccaactgtgagagagcggaacatgcctgtctgtccaatccatgctccaac
ggagggagctgttcagaaaccagtcaaggctacgaatgtcagtgtgcgccgggctggagc
ggcccctcctgcaccatcaatgttgacgactgctctccaaacccttgcaatcacggagga
acctgccaggacctggttaacggtttcaaatgtcactgtccttcacagtggacggggaag
acgtgtctgatagatgccaacgaatgcgaaagcaagccttgcgtcaatgccaactcctgc
cgcaacctgattggtggatacttctgcgagtgtgtacccggctggacggggcagaactgc
gacatcgatataaacgactgcaaggaccagtgccagaatgggggaacttgcaaggatctg
gtaaacagttatcgttgcgcgtgcccccctggcttcgccggcgagcactgtgagagggac
atcgacgagtgtgcgagtgcgccttgcctgaacggcggccgctgtcaggacgaggtcaac
agcttccagtgcctgtgcctggctggcttttcagggaatctctgccagctggatatcgat
tactgctcccccaacccgtgtcagaatggagcgccatgcttcaacctggccacagactac
ttctgcgcttgcccagaggactacgaaggcaaaaactgctctcacctcaaagaccactgt
cgcatcaccacttgtaaagtgattgacagctgcacggtcgcagtggcatccaacagcacg
ccgggaggagagcgctacatttcgtcgaatgtgtgtggacctcacggccgctgccggagc
caggctggaggccagttcagctgcgagtgccaggaaggcttcagaggcacctactgccac
gagaacatcaacgactgtgagagtaacccatgcagcaatggaggcacctgcatcgacaaa
gtcagcgtgtaccagtgcatctgcggcgacggctgggagggcgaccactgcgagatcaac
atcgatgactgcagcaccaacccctgtcataatggaggaacatgtcgagacctggtgact
gatttcttttgcgaatgcaagaatggctggaagggaaagacgtgccactcccgcgaaagt
cagtgcgatggagccacatgtaacaacggaggcatctgccatgacgaggtcgacacgttc
cagtgcaagtgttccccagggtgggagggtacgacgtgtaacatagccaaaaactcaagt
tgtcttccaaacccgtgtgagaacggaggtacctgtgtggtaaccggggagtcgtttacc
tgcgtctgcaaggaaggctgggagggtcccacatgcacccagaataccaacgactgtagt
ccccacccatgctacaacagtggaacctgcgtggacggggataactggtaccgctgcgag
tgcgccccaggcttcgcaggtccagactgtcggatcaatattaatgagtgccagtcctct
ccatgtgctttcggctcatcctgtgtggatgagatcaacggatatcgctgcctgtgtcca
ccagacaggactggaccccactgtcaagaagtgacgaggaaaccttgctctgttaatgga
cacgtcacccctgatggactcaaatgggatgaagactgcaacacttgccactgttcgaat
gggaaagttgcgtgcacaaagatgtggtgcggccctacatcatgccacctgggtgccaaa
ggtcgaggtgggtgtccttcgggccagagctgcatccccatcagggagggccactgcttt
gtgaagccctgcctcggcttcggagagtgctggcgctccaaccctcccccgcatcccacc
aaatgccaccccagctccagttaccaggacaacagctgcgccaacatcaccttcaccttc
aacaaggagaccatgcctcaaagcttgactgtggaggatgtgtgtaagcagctgaggcgc
ttgtacgtggtgaagaatttctcctcagagcattctgtgtccataacctgtgacccctca
ttctcagccagcaatgaaatccacgtctgcatctccacagaggatcattgtttagaccgg
agccccgttaaagagatcacagacaggataatcgacctggttagcaaacgcaacgggaac
aacaccatcatcgctgccatcgtagaagtgcgtgtgccaagctccagcaaaactgacttc
ctagtgcccctcctcagctccatcttcatcgtcatctgggtcctcgtgctggtctccatt
tttctgtggtgcatgcgccgccggcggaaacagagcaaccacaacgggacgccggccgct
ggcgccgaagacaacacgaccaacaacgtgcgggagcagctcaaccagatcaagaacccc
atagagaagcacgtgggcctcacggtggccatcaaagactacgaaaacaagaactccatc
attgccaaaataaggacaaatcatcccgagggggatgaggacgacaaggagaggcacata
cagaagggccgctttgccaaacagccagcatacacactggtggagagggacgagaagacg
cccatctccaataccaaccccacatccaaacaccctaattggactaataaacaggacaac
agagacttggagacagcaaacagcataaacagggtggactacattgtatag
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