Anoplopoma fimbria (sablefish): 129092154
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Entry
129092154 CDS
T09102
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129092154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129092154
03016 Transfer RNA biogenesis [BR:
afb03016
]
129092154
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
129092154
Messenger RNA biogenesis [BR:
afb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
129092154
Transfer RNA biogenesis [BR:
afb03016
]
Prokaryotic type
tRNA degradation factors
129092154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
129092154
NCBI-ProteinID:
XP_054455949
LinkDB
All DBs
Position
6
Genome browser
AA seq
770 aa
AA seq
DB search
MRYLLQLGRSFTRLHLRLCHQSVYSNHTNPRGLLVDLGEKKLEISSGRFARFADGSAVVQ
LGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRREMGTTDNEILTSRLI
DRCIRPLFPSGYFYDTQVLCNLLAVDGVNDPDVLAINAASAALALSDIPWHGPIGAVRVG
MVDGEMIINPTRNEMTASSLNLIVAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IILAIQQLVREQKITKRTPVKIFAAPTDMVEHVRQSASKKIYAVFTDYTHDKISRDEAIN
KVRLETEEDLKERFPQAEPYEVIESFNTVSKEVFRSLILNEYKRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLSSVTFDSLESSIKADIITTALSGIKSKNFMLHYEFPPYAT
NEIGKMGGINRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAIGLISKANPEKPTEIVDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKCIAKPRETRKENGPVVENVRVP
ISRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMSEAQDFISEICKDDQE
LQLEFGAIYTATIIEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAASVVKTLSEKQSISMGSSNGQTTSTDL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatttgctccaactgggtcgctcgttcacccgcctccacctgcgtttatgtcac
cagagtgtttacagcaaccacaccaacccacgaggactgctagtggaccttggggagaag
aaacttgagatctcttctgggaggtttgctagatttgctgatggatctgctgtagtacag
ctgggagatacctccgtgatggtgactgctgtgagcaaaaccaaaccttctccgtctcag
ttcatgcctcttgtggtggactacagacagaaagcagctgctgcaggtcgaatccccaca
aactatttgaggcgagagatggggaccactgacaacgagatcctcaccagcagactcata
gacaggtgtatcagaccgctgttcccttctggctacttttacgacactcaggtcctttgt
aacctgctggcagtcgacggtgtcaatgatccagatgtgctggctattaatgcagcttct
gctgctctggcgctgtcggacatcccctggcatggacccataggtgctgtgcgtgtgggc
atggtagatggagagatgattattaaccccactaggaacgagatgacggccagcagtctt
aacctcattgtggccggagcccccagcagtcaagtggtgatgattgaggcgtcggctgag
aacgtgctgcagcaggacttttgccatgcggtgaaggtgggagtcaaacacacgcagcag
atcatactggccatccagcagctggtgcgggaacagaagatcaccaagcgaaccccggtc
aagatcttcgcggccccgactgacatggtggaacatgttcggcaatcagcttccaagaag
atctatgctgttttcactgattacactcacgataagatttcaagagatgaagctatcaac
aaagtccgactagaaactgaggaggacctaaaagaacgattccctcaggctgagccctat
gaagtcatcgaatccttcaacactgtgagcaaagaagtctttcgcagtttaattctaaat
gagtacaagaggtgtgatgggagggagctgactgctttaaggaacatttcctgcgatgtg
gacctctttaaaccgctgcatggctccgctctgttccagagaggacaaacacaggtgctg
agcagtgtcacgtttgattccctggaatccagtatcaaagcagatattatcaccacagct
ttgagtggcatcaaatccaagaatttcatgcttcattatgagttccctccgtatgcaacc
aatgagattggaaagatgggaggtatcaacaggagagagcttggacatggggccctggct
gagaaagctctgagaccagtcatccctaaagacttccctttcactatccgggtcaccgct
gaggtgcttgagtcaaacggatcttcctcaatggcctccgcatgtggaggcagcctcgct
ctaatggatgcaggtgttcccatctcttctgctgtggcaggtgtagcaattggcctcatc
tccaaggccaacccagagaaacctactgagatcgtagactacagattactcactgatatt
ctgggaatagaggattaccttggagacatggacttcaaattggcgggaacaaacaagggc
atcactgcgttacaggctgacgtgaagatcccaggtttgcctctgaaggtggtcatggag
gccatccaacaggccacagtggcaaagagggagatcttgggcatcatgaacaaatgtata
gcaaaacccagagagacgaggaaagagaatggaccggttgttgaaaatgtccgggtgcct
atttccagacgagcacgcttcgttggtccgggcggttataatcttcgcaggctacaagct
caaacaggtgtgacaataagtcaggtggacgaggagactttctctgtgttcgctccgaca
ccaggagccatgagtgaagctcaggacttcatcagtgaaatctgcaaagatgatcaagag
ctgcagctggagttcggtgctatctacactgccaccattattgagataagggacatcggt
gtgatggtgaaactttatcccaacatgagtgctgtcctgctgcacaactcacaactggac
cacaaacggatcaaacatccgagtgctttgggtttagaggtgggacagcagatacaggtc
aagtacttcggacgggacccaacagacggcagaatgagactttcgcggaaggtgctccag
tctcctgctgcaagtgttgtgaagacgctaagcgagaaacagagcatctccatgggttca
agcaacggccaaaccaccagcaccgatttgtga
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