Anoplopoma fimbria (sablefish): 129092188
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Entry
129092188 CDS
T09102
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129092188 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129092188 (spast)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
129092188 (spast)
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
129092188 (spast)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
129092188 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
MIT
TIP49
AAA_5
AAA_14
Mg_chelatase
AAA_16
IstB_IS21
DUF815
nSTAND3
AAA_2
NPHP3_N
AAA_24
AAA_33
DUF5906
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
129092188
NCBI-ProteinID:
XP_054455995
LinkDB
All DBs
Position
6:18107148..18110381
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AA seq
473 aa
AA seq
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MASKSRDSGEVIKNYHKQAFEFVSKALRIDEDDTGDKEQAVQWYKKGIAELESGIAIEIT
GQAGEQYDRAKRLQDKMVTNLTMARDRLALLDATLTSKKSSPQKTSNHDLPQPKPVPKSQ
PAVRGLSTNIRPSTFVRPPSRSTDPKVTPRVGKAQNGKHTAGKQPPKRNMKNFKNVDSKL
ANLIMNDIVDSGASVSFDDIAGQNLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPP
GNGKTMLAKAVAAESNSTFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIFMDEID
SLLCERREGEHEASRRLKTEFLLEFDGVQSRGDDRVLVMGATNRPQDLDEAVLRRFAKRV
YVALPDGETRLTLLKNLLEKHRNPLSKNELSSLAKLTAGYSGSDLTSLAKDAALGPIREL
GPDQVRSMAASEMRNIKMKDFEDSLKRIKPTVSSATLNMYTKWNKDFGDTTAF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaagcagagacagtggtgaagttattaaaaactaccacaaacaggcgttt
gagtttgtatcgaaggcattaaggatcgacgaagatgatacaggagataaagagcaggct
gtacagtggtacaagaaggggattgctgaactcgaaagtggtattgcaatagagatcacg
ggacaagcaggagagcaatatgacagagcaaagagacttcaggataaaatggtcaccaat
ctcaccatggcaagagataggcttgctctgttggatgcgacactgacatctaaaaagagt
agtccacagaagacctcaaatcatgatcttccacaaccaaagcctgtgcctaaaagccag
cctgcagtgcgaggtttgtccactaacatcaggccctccacttttgttagacccccatcc
agatccactgatccaaaggtgaccccacgggttggaaaagctcaaaatggaaaacacaca
gctgggaaacagcccccaaagaggaatatgaaaaacttcaagaatgtggacagcaaactg
gccaacttgattatgaatgacattgtggacagtggagcatctgtatcctttgacgacatt
gcgggacagaacttggccaagcaagcactccaggagattgtcatcctccctgccttaaga
ccagagctctttaccggcctaagagctccggcacgtggtttgctcttatttggcccgcct
ggaaatgggaaaaccatgctcgccaaagcagtcgctgcagagtcaaattcaacgttcttc
aacatcagcgcagccagtttgacttctaaatatgtaggagagggcgagaagcttgtacga
gcactgtttgcagtcgccagagaattgcagccctctgtcatctttatggatgaaattgac
agcttgctctgtgaaaggagggagggagaacatgaggcctctcgtcgattaaaaaccgag
ttcctccttgagtttgatggggtgcagtcaagaggagacgacagggtactcgtaatggga
gcgaccaacaggcctcaggatcttgatgaagcagtactgaggcgctttgcaaaaagggtt
tatgtggcattgcctgatggggagacaagattaactctgctgaaaaaccttttggaaaag
cataggaatccactgagcaaaaatgaactgtcctctctagcaaaactgactgcaggatat
tcaggaagtgatctcacctcattagccaaagatgctgcgcttgggccaattagagagttg
ggtccagaccaagtccgaagtatggctgctagtgagatgcgtaacatcaagatgaaagac
tttgaggattccctgaagcgcattaagcccactgtgagctcagcgactcttaatatgtat
accaaatggaacaaagattttggggacacaacagctttttga
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