KEGG   Anoplopoma fimbria (sablefish): 129092194
Entry
129092194         CDS       T09102                                 
Name
(RefSeq) ras-related protein ORAB-1-like
  KO
K07874  Ras-related protein Rab-1A
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129092194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129092194
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129092194
   04031 GTP-binding proteins [BR:afb04031]
    129092194
Membrane trafficking [BR:afb04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    129092194
 Autophagy
  Other autophagy associated proteins
    129092194
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129092194
  Exosomal proteins of other body fluids (saliva and urine)
   129092194
  Exosomal proteins of colorectal cancer cells
   129092194
GTP-binding proteins [BR:afb04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    129092194
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA ABC_tran AAA_7 PduV-EutP AAA_16 LANC_like AAA_29 Septin AAA_22 AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 129092194
NCBI-ProteinID: XP_054456002
LinkDB
Position
6:complement(21430490..21440182)
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GGEKPNVKLTPGTSVKPSSGGCC
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcccgaatatgactatttattcaagctgctcctgattggtgactctggtgttgga
aagtcttgccttctactccggtttgcagacgacacatacacagaaagttacattagcact
atcggtgtggacttcaaaatacgaaccatagaactagatggaaagaccattaagcttcaa
atctgggacacggcgggtcaggagaggtttcgtacaatcacatccagctactacagaggt
gctcatggtatcattgtagtgtacgacgtcacagaccaggagtccttcaacaatgtcaaa
cagtggctacaggagatcgaccgctatgccagtgaaaacgtcaacaagcttttggttggg
aacaagtgcgacctgacgacaaagaaggtggtggattacacaacggcaaaggagtttgca
gactctctgggcattccctttttggaaaccagcgccaagaacgccaccaacgtggagcag
gccttcatgaccatggccgccgagatcaagaagaggatgggccccggggccacggccgga
ggaggggagaagcccaacgtgaagctgacccccggcaccagtgtcaagccctcgtcagga
ggatgctgctga

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