KEGG   Anoplopoma fimbria (sablefish): 129092280
Entry
129092280         CDS       T09102                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein bicaudal C homolog 1-like
  KO
K18756  protein bicaudal C
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129092280
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129092280
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_GLD-3_3rd KH_2 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 129092280
NCBI-ProteinID: XP_054456149
LinkDB
Position
6:9609418..9664537
AA seq 972 aa
MAAQCDALSGYLQQSDQGSNSERSTDSPLPGSEEDLSGLHPLPDPEWTEERFRVDRKKLE
VMLLAASEGRVNGGEDFFQKIMDETQTQIAWPSKLKIGAKSKKDPHIKVCGKRENVREAK
ERIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKRVMEETGCHIHFPDSNRNNQAEK
SNQVSIAGQPGGVEAARVKIRELLPLVLSFELPAIMQSDPSSPTVQHISQTYSLTVSFKP
PTRLYRATGVVRGSQNNANAVKRGTALLLEHLAGSLASTISVTTHLDIAPQHHLFMKGRN
GSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIKED
IEVEPQCIAALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESNGVS
SSSPSVALNPTANVPSLICPVGLDILASAGLGLSNLGFLGATAAHSLTNSAAPNAVLNSL
NSSMSPLQTQSPSTPTPTPSLWPSSLTSTQGFSSQLMLHPATQATLSSILLSGVQGYTQN
TPSPPPGLAPIDKQTNGVPDCTKGSCTLNGHVKHPGSVYGRIATASLAETVLSPAPCDSV
QEASGHNPSEPRSSKSSQDEGSDTFVEVGMPRSPSHSANGNELKQMLASCKTSSGKRQAV
ELLQGTKNSHLHSDCLLSDAESSSSDSPVADKRAPGSERAAERAAQQNERERIRLVPQTS
FANIQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHVS
YKPSMSTTYEDSPLSLSRSNSREGLGNGSDSENWRDRNGNGLPSHXEFPAAVGSPKRKQN
KCAAEHYLSSSNYMDCISSITGSNGCSLNSSLKGSDLPELFSKLGLGKYTDVFQQQEIDL
QTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPPIRSSFLEGGASGRLSRQ
FHADIASVSGRW
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggctgcccagtgcgacgctttgagcggatacttgcagcagtcggaccagggctcaaac
agcgagcgcagcaccgactcccctctaccgggatcagaggaggacctgagcggactccat
ccgctgccggacccggagtggaccgaggagaggtttcgggtggaccgtaaaaagttggaa
gtcatgttattagctgcctccgaggggagagtcaacggaggggaggatttctttcagaag
atcatggatgaaacccaaacgcagatcgcctggccgtccaaactgaaaatcggagccaag
tccaaaaaagatccacatatcaaggtgtgcgggaagagggagaatgtgagggaagccaaa
gaaagaattatgtcagtccttgacacaaagagtaacagggtgactttgaagatggacgtc
tctcacacagagcactctcacgttattggcaaaggtggcaacaacatcaagagggtgatg
gaggagacgggttgccacatccatttcccagactctaacaggaacaaccaggcggagaaa
agcaaccaggtgtccatcgcagggcagccaggaggggtggaggcagctcgagtaaaaata
agggagctgctccctctcgtgctgtctttcgagcttcccgccatcatgcagtccgacccc
agctcccccaccgtgcagcacatctcgcagacctacagcctcacagtctccttcaagccc
ccgactcgcctctacagggccaccggcgtggttcgcggctcgcagaataacgccaacgcc
gtcaagagaggcacagctctgctgttagagcatttggctgggagcctggcaagcaccatc
tccgttaccacccacctggacatcgcaccccagcaccacctctttatgaagggacgcaat
ggcagcaacatcaagcacatcacccagcggacgggagcacagatccacttccctgacccc
aacagcccccagaagaaatccacagtctacattcagggcaccattgaatcggtctgcctg
gcacggcagtacctcatgggctgcttgcctctggtgttaatgtttgacattaaagaggac
attgaggtggagccccagtgtatcgcagcactaatggagcagctggatgtcttcatcagc
atcaaaccaaagccaaaacaacccagcaagtctgtgatagtaaagagcgtggagaggaac
gcagtgaacatgtacgaagcccgaaaattcctcctgggcctggagagcaacggggtgtca
tcctcctcgccctctgtggcgttgaatcccaccgccaacgtcccgtccctcatctgcccc
gttggcctggacatcctggcctcagctggcctggggctgagcaatctgggtttcctgggt
gcgacggcggcccactccctcaccaactccgctgcacccaacgccgtcctcaacagctta
aattcctccatgagccctctgcagacacagagtcctagcacacccacacccaccccctcc
ctctggcccagctccctaaccagcacccaaggcttctcatctcagctgatgctgcatccc
gccacccaggccacattgagcagcatcctgctgtcaggtgttcagggttacacacagaat
acaccgtcccctccgcccggcctcgcccccatagataagcagaccaacggggtccctgac
tgcaccaagggctcctgcactctcaacggacatgtcaagcatcctggctcagtctatggg
aggatagcgactgcatcacttgcagaaacagttttgagtccagccccatgtgactcggtc
caggaggccagtggacacaatccttcagaaccgcggtccagcaagtccagccaagatgaa
ggttctgacacatttgtggaagtgggcatgcccagaagcccctcccactcagccaatgga
aatgagctgaaacagatgctggcttcatgtaagacgtcctcggggaagcgacaggctgtg
gagcttctgcagggcaccaagaactcccatctacactctgactgtctcctctcggacgct
gaatccagctcgtcagacagccctgtggccgataagagggcgcccggcagcgagcgagcc
gctgagagggcagcgcagcagaacgagagggagcgaatcagactggtaccacagacctcc
ttcgccaatatacaagcatttgactatgaacagaaaaagctgttggcaaccaaagctatg
ttaaagaagcctgtggtgactgaggtgcggactcctaccaacacctggagcggtctgggc
ttctcaaagtcgatgccagctgagaccatcaaggagctgcggagagccaatcacgtttcg
tacaagcccagcatgagcaccacctatgaggattccccgctgtccttgtctcgatccaac
agcagggaaggcttagggaacggcagtgactccgaaaactggcgagacaggaacggtaac
ggcctgccgagtcacngcgagttccccgccgctgtcggtagcccgaagaggaagcagaac
aaatgtgctgcagagcattacctcagcagcagcaactacatggactgcatctcctcgata
actggcagcaacggctgcagtctgaactcgtctctgaaaggctcagacctgcctgagctg
ttcagcaagctgggcttagggaagtacacggacgtcttccagcaacaagagattgacctc
cagacattcctgactctaacagaccaggacctgaaggaactcggcatcaccacctttgga
gcccgcaggaaaatgctgctcgccatctcagaactaaacaagaaccggaggaaactattt
gagccacccatcaggtcctctttcctggaagggggagccagcggccgcctctcccgtcag
tttcacgcagacatagccagcgtcagtgggcgatggtag

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