Anoplopoma fimbria (sablefish): 129092286
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Entry
129092286 CDS
T09102
Name
(RefSeq) vinculin-like
KO
K05700
vinculin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04520
Adherens junction
afb04810
Regulation of actin cytoskeleton
afb04820
Cytoskeleton in muscle cells
afb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129092286
04520 Adherens junction
129092286
09142 Cell motility
04820 Cytoskeleton in muscle cells
129092286
04810 Regulation of actin cytoskeleton
129092286
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129092286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129092286
04147 Exosome [BR:
afb04147
]
129092286
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129092286
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129092286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
129092286
NCBI-ProteinID:
XP_054456155
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All DBs
Position
6:14697936..14719416
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AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLAVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVNSMNTVKELLPILISAIKIFVATKSSRGAGVEEAERNRKFTFEKMSAE
INEIIRVLQLTTWDEDAWTNKDMEALKRYLALIESKMAQAKGWLKDPHGQPGDPGEVALR
VILDEACKVGELCAGKERKDILATTKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQGL
DLLFGKVDSAARRLEALINAKQAIARRLDAAQAWLADPKGGPEGEENIRALLAEAKRIAD
LCEDPKERDDILRSISEIAGLTARLVELRRQGKGDSPEARALAKQIGAALLTLQSKTNRA
VANMRPTKPAVTLEGKMEQALRWVNNPGVDDRGVGQAAIRGMVGEGRRLAGGLIGPYRQD
MIGRCDRTEALMTSLADMASRGDAEAPRARATAAQLQDSLKDLRQHMQEVMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRGEVFEERAGNFEAHAGRLGATAEKAAAVGTANKSTVEG
IHAAVKHARDLTPQVTCAARILLKNPGNKAAYEHFDTMKNQWIDNVEKLTSLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFR
DTVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGKVREAFQPQEP
DFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMMV
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
DMLVHNAQNLMQSVKETVREAEAASIKIRTDSGCTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaagagggggaggtggacggtaaagccatcccagatctg
acggtgccggtggccgcggtgcaggcggcagtcagcaaccttgtgcgggtgggcaaggag
accgttcagaccaccgaggaccaggtgatgaagagagacatgccacctgcgttcattaag
gtggagaattcgagctctaagctcgtccaagccgctcagatgctaaaggcagatccatac
tctgttcctgcacgagattacctgatcgatggatccagagggatactgtctggaacgtct
gacctgctccttacctttgatgaagcagaggtgcgtaagataattcgtgtgtgtaaaggt
atcctagagtacctggcagtagctgaggtggtggagaccatggaggacctcatcacttac
accaagaacctgggaccagggatgactaaaatgtcaaagatgattgaggagaggcagcag
gagctgacgcatcaagaacacaggcagatgctcgtcaactccatgaacactgtcaaagag
ctgctgcctattcttatatccgctataaagatttttgtcgcaaccaagagcagtcgaggt
gccggcgttgaggaggcagagaggaacagaaagtttacctttgaaaagatgagcgctgaa
atcaacgagatcataagagtgttacagctcaccacgtgggatgaagacgcctggaccaat
aaggatatggaggctttgaagagatatctggctttgattgagtcaaagatggcacaagct
aaaggctggctcaaagacccccatggacaaccaggagaccccggcgaggtggccctgcgt
gtgattctggatgaagcttgtaaggtgggagagctgtgtgctgggaaggaaaggaaagat
attctggcaaccactaaggctctgggacaaatgactgaccagattgctgatctacgagcc
agaggccagggtcctaccccggggtgtgtgcagcgtgcaggccagtgctcacagggctta
gacttgttgtttggcaaagtggacagtgctgctcgcagattggaggctctaatcaatgcc
aagcaggccatcgccaggaggctagacgctgcacaggcctggttggctgatcctaaaggc
ggtcctgagggagaggagaacatcagagcgctactagcagaggccaaacgcatcgctgat
ctatgtgaagaccccaaagagagggatgacatcctgcgctccatcagtgagatcgcaggc
ctcaccgccagacttgtggagctacgcagacagggtaaaggggatagcccagaggcccgt
gcattggcaaagcagatcggggcggcgctgctgaccctgcagtccaaaaccaaccgggct
gtggccaacatgagaccaaccaaacccgccgtgaccttggagggcaagatggagcaggcc
ctccgctgggtgaacaaccctggagtggacgacagaggagtaggccaggcagcaatcagg
ggaatggttggagaagggaggaggctggcaggaggcctgataggcccgtaccggcaggat
atgattggacgatgcgaccgaacagaggctcttatgacatcattggcagacatggccagc
aggggcgatgctgaggcccctcgtgcacgagctacagccgcacaactgcaggacagcctt
aaggacctgaggcagcacatgcaggaggtaatgacccaggaagtatctgatgttttcagt
gacaccactacccctatcaaactgctggctgtggctgcaacggctccacctgacgccccc
aacagaggggaggtttttgaagagcgtgcagggaacttcgaggcccacgcaggtcggttg
ggggcgactgcagagaaggctgctgccgtgggaacagccaataaaagtacagtagagggg
atacatgctgctgtgaaacatgccagggacctcacaccacaggtgacctgtgctgctcgg
atcttgttgaagaatcctggaaataaagcagcatacgagcactttgacaccatgaagaac
cagtggattgacaatgtggagaaactcactagtctggtggacgaagccatcgacaccaaa
tctctgttagatgcctccgaggaggcgataaagaaagacatcgacaagtgccgagttgcc
atggcgaacgttcagccccaaatgcttgttgccggggcaacgagcatagcaagacgagct
aatcgggtcctgttggtggctaagagggaagtggagaactctgaagatcctcggttcaga
gacacagtgaaacatgcgtcagacatcctctcccacaccatctcacccatggtgatggat
gccaaagcagtggctggtaacatacaggataaagctctgcagaaggcctatctggactcg
tgtctgaggattctggctgcagtcggcaaagttagagaagccttccaacctcaggagcct
gacttccctcctccaccacctgacctggaccagctccatgttagtgatgagcaggctcca
cccaagccccccttgccagagggcgaggtgcccccgccacgtccccctcctccagaggag
aaggatgaggagttcccagagcagaaggctggagaggtgctcagcgagcccatgatggtg
gccgccaggcagctgcacgatgaggcacgcaagtggtcaagcaagggtaacgacatcata
gcagcagccaagcggatggctctgttgatggcagaaatgtctcgccttgttcgtggtgga
agcgggaacaaacgagccctgattcagtgtgctaaagacattgccaaggcctcggatgag
gtgacgagactggctaaagaagtggccaagcagtgcactgatagacgcattagaactaac
ctgctgcaggtgtgtgaacgaatccctaccatcagtactcagctgaagatcctctctact
gtcaaagccaccatgctgggacgaacaaacatcagtgaagaggagtcagagcaggccaca
gatatgttggtccataacgcccagaatctgatgcagtcggtgaaggagaccgtcagagaa
gcagaagcagcctcgatcaagatccgcacagattcagggtgcactcttcgctgggtgcgt
aagaccccctggtaccaataa
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