KEGG   Anoplopoma fimbria (sablefish): 129092327
Entry
129092327         CDS       T09102                                 
Symbol
cldnf
Name
(RefSeq) claudin f
  KO
K06087  claudin
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03272  Virion - Hepatitis viruses
afb04382  Cornified envelope formation
afb04514  Cell adhesion molecule (CAM) interaction
afb04530  Tight junction
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    129092327 (cldnf)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    129092327 (cldnf)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129092327 (cldnf)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    129092327 (cldnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:afb03037]
    129092327 (cldnf)
   04147 Exosome [BR:afb04147]
    129092327 (cldnf)
Cilium and associated proteins [BR:afb03037]
 Other cilia and associated proteins
  Stereociliary proteins
   129092327 (cldnf)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   129092327 (cldnf)
  Exosomal proteins of colorectal cancer cells
   129092327 (cldnf)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 MFS_MOT1
Other DBs
NCBI-GeneID: 129092327
NCBI-ProteinID: XP_054456219
LinkDB
Position
1:27662279..27670085
AA seq 251 aa
MGKIGKEVTGQVISFIGLVGVSVTCGIPMWRVTSYIGANIVTGQIVWDGLWMNCVMQSTG
QMQCKLNESVMNLSRDLQSARALVIISLIFGFIGFMVTFVGAKCTGCLDKDSSKANVVII
GGCLIIVSAVLVLIPVCWSAAITITDFQNPLTIETQKREIGASIYIGWAATAILLIGGII
LTTSCPPRKAMYGYPGYPPAPMYPYAGPGPNPAVYSPVYAPASSQPYTGTGTYLPSKPYA
APTNYSARQYL
NT seq 756 nt   +upstreamnt  +downstreamnt
atggggaagattggcaaggaggtgacaggtcaggtcataagcttcataggcctggttggg
gtgtcggtgacctgtgggatccccatgtggagagtgacctcctacatcggagccaacatc
gtgacgggccagatcgtgtgggatggcctgtggatgaactgtgtgatgcagagcaccggg
cagatgcagtgcaagctgaacgagtccgttatgaatctgtccagggacctgcaatccgcc
cgagccctggtcatcatctccctcatcttcggcttcatcggcttcatggtcaccttcgtc
ggggccaagtgcaccggctgcctggacaaggattcctcaaaggccaatgtggtgatcata
ggcggctgtttgatcattgtttccgccgtcttggtcctgatccccgtctgctggtccgca
gccatcaccatcacagacttccagaaccccttgaccattgagacccagaagagggaaatt
ggagcctccatctacattggctgggccgccactgcgattcttctgatcggtgggatcatc
cttaccacttcctgccctcctcgaaaggccatgtatggatacccagggtacccaccggca
ccgatgtacccttacgcaggcccggggccaaaccctgcggtgtatagccctgtgtatgct
cccgcatccagccaaccgtacacaggcactgggacatacttgcctagcaaaccatatgca
gcaccaaccaactactctgctagacaatacctctaa

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