Anoplopoma fimbria (sablefish): 129092374
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Entry
129092374 CDS
T09102
Symbol
exo1
Name
(RefSeq) exonuclease 1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129092374 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129092374 (exo1)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129092374 (exo1)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
129092374 (exo1)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
129092374 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
TPR_2
Motif
Other DBs
NCBI-GeneID:
129092374
NCBI-ProteinID:
XP_054456284
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All DBs
Position
6:25692804..25712653
Genome browser
AA seq
799 aa
AA seq
DB search
MGISGLLQFIKDAAEPISVKKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVLYCM
KLVEMLLTFGVKPILVFDGRNLPSKKEVEKARRERRESNLQKGRQLLREGKLSEARDCFT
RCVNITPAMAHNLIKAARKRGVDCVVAPYEADAQLAYLNKSGLAQAVITEDSDLLAFGCK
KVILKMDKQGNGLEIEQSNMGRCRSLGNIFTEEKFRYMCILSGCDYLASLHGIGLGKACK
LLRLAKDPDILKVIRKMGQYLKMNLVIPEQYIEGFIRANNTFLYQLVFDPVRRKVVPLNP
YPEHIDLAKLSYAGLNVGDDKGLQMALGNLDINTMERIDDFSPDKLTPQLSKPRSRSWND
SPVPTGPSIWSGGFKTAAVTPPLSTASPDRPPSTRGKERIISLVGLRPASRELQVKRTRE
DTSVSDQDVFQQYLSSSPKRSRSDQHPDKPTLTSQPRTRNRFATLLQRRNQEAEEDSQAT
CSRFFSSSSTAASLNTKVSPQEDLPQDEEPRAGSPTQDNSPNTQNKDSYGPDIPPLNTPS
PPASTGKTSPSSARRGPRLFQWSGSSSKTEQLRTPKSTSGLSALQQFQYKKESFSLSTKT
HKPPGDMSPPRQASTDGKPEEKDDLQDSPPSQDSAYFSQSQPDFTSCQKEQVFTCNFPSS
HQEDATTDMNSSRDSEPEQSPTLSTEADLKPGMLRSKVSDLSKPMSSNQRQAAKVRTLGP
ARASGLRRKSVGSGKKTSSSNNENNPGAQATISSLWKNFSFKKDSQKISVCKKGEPMSPV
KDNLPTSSPQTDMNLITSF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctccggactgctgcagttcatcaaagatgctgcagagcccatcagcgtgaaa
aaatataaaggccagaccgtagctgtggacacatactgttggctgcataaaggagcattt
tcatgtgctgagaagctcgctaaaggagaaccaactgaccagtatgtgctgtactgcatg
aaattagtggaaatgcttttgaccttcggcgtcaaaccaattctggtgtttgatggacgc
aatttgccttcaaaaaaagaagtggaaaaggctcgcagggagcgcagagaaagcaacctt
cagaagggccgacagctactacgtgaaggcaaactgtccgaggccagagactgttttacc
cgctgtgttaacatcaccccagccatggctcataacctaattaaggcagcaaggaagaga
ggagtggactgtgttgtggctccatatgaagctgatgctcagttagcgtacctcaataaa
tctggtttggcccaggctgtcatcacagaagactctgacctgctggcattcggctgcaaa
aaggtgatcctcaaaatggacaagcagggcaatggcctggagatagagcaaagcaacatg
ggccgctgtcgctctctggggaacattttcacagaggagaagtttcgctacatgtgcatc
ctctctggatgcgactatctggcctccctacatggcatcggtctaggcaaagcctgcaaa
ctgctgcgactggccaaagacccggatatcctcaaggtgatcagaaagatgggccaatat
ctgaagatgaatctagtcatacctgagcagtacattgagggattcatcagagccaataac
accttcctctaccagttggtgtttgatcctgtcagaaggaaggttgtacctctcaacccg
tacccagagcacatcgacctggccaagctcagctacgctggacttaatgtaggagatgac
aaaggcctgcagatggccttgggaaaccttgacatcaacaccatggagaggatagatgac
ttcagcccagacaaacttactccacagctttctaaacctcgcagtcgcagctggaacgac
tcaccagtacccactgggcccagtatctggagtggaggctttaagacagctgcagtcacc
ccgcccctgtctactgcctccccagacaggcctccctccaccagggggaaggagagaatc
atcagcctggtcggtctcaggccggcctccagagagctgcaggtgaagagaacacgagaa
gacactagtgtatcagaccaggatgtgttccagcagtacttgtcctccagtcccaagagg
tccaggtcagaccagcatccggacaagccaacattaaccagtcagcctcgtacacgcaac
cgcttcgccacccttctgcagaggcgaaaccaggaagctgaggaggacagccaagccaca
tgcagcagattcttcagcagttccagtacagcagccagtctgaacactaaggtgtctcct
caggaggatttacctcaggatgaagagcccagagctgggagtcccactcaggacaactct
cccaacacccagaacaaggacagttatggtcccgacattccacccttgaacacccccagc
ccaccagcatcaactggcaagacatccccaagttcagccaggcggggccctaggctgttt
cagtggtcaggcagctcctccaaaactgaacaattgagaacgcctaagtccacctcaggc
ctgtccgccctgcagcagtttcagtataagaaggagagtttctccttgtccacaaagacc
cacaaaccacccggagacatgtcacccccacgtcaggcctccactgatggaaaaccagag
gaaaaggatgacctccaagattcacctccctcccaggacagcgcctacttctcccagtcc
cagcctgactttacttcctgccaaaaagagcaagtcttcacctgcaacttcccctcctcc
caccaagaggatgctacaactgatatgaattcaagcagagattctgagccagagcagagt
ccaacactctcaacagaagcagatctgaaacctggcatgctgagatcaaaggtttcagat
ctctcaaagccaatgtccagcaaccagcgccaggcagcaaaggtgcgaacactgggccct
gccagggccagtggactgaggagaaagtctgtgggttctgggaagaaaacctcttcctcc
aataatgaaaacaaccctggtgcccaagccaccatcagcagcctctggaagaatttcagc
ttcaaaaaagattcccagaagattagtgtgtgtaaaaaaggagagcccatgtctcctgtg
aaagacaacctgccgaccagctcgcctcagacggacatgaacttaatcaccagcttctga
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