Anoplopoma fimbria (sablefish): 129092547
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Entry
129092547 CDS
T09102
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129092547 (npas4l)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129092547 (npas4l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
129092547
NCBI-ProteinID:
XP_054456505
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Position
6
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AA seq
755 aa
AA seq
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MTIWCNSCKCHVRAPCTSHLLPEDHRSSFCRRFRSTKGASKARRDHINHEIRNMRTLLPI
TQEDQERLSYLHSMAAICSYIRKSVLFQGLPAGARSHCSPPYEAFLPSLHGFILVTTARG
RLVYVSENVEEYLGLSMIDVLQGDTFYDMVERSDIDILKSNLDFEHNSPSERTFICCMQT
SKAFKLQHGSCCSMTVRGSFRSFPQPWPSSSSVRPTSQPLFVAVCTPTVDRLRSSDSHFC
DSFSSVHRLDMTFTQLSDSVLYFLGYWAEEMTGRSWYSLVHPEDLTLSADSHRSLVLADE
GFQVEMVLRLQCKDLSWTWIYIRANKEPEGQGLSCTNFLISETEARFLQKKISCDAFRPS
PLANHAGQQAPHAQTYNNTKCLKRQRTSSNQDEEPGAKARRETEQDLYYMVCGSSRGDSS
PAPSGDSPALFTPPYSPASSSSTLQQEELSHDLLLDVHGYTDQLLSSPEGSPSYYSYPEA
GLTCHQSPSGSLASAAEQTFDPAGFGARSPPSSSSPSYDFQACMADARLVPDCPSVSDMC
ESPVDCALHPDDFSLLEQPQGGGLVQVHHVPYQVLPTHSSLLTPSQSPTSTEAPHYNERE
QAEISILAQQISSLASSFAMYHTPPSACDWPRHPPLPSALPLKRELVLDDGMFDSILKEL
DMGVRESSMSCPGVAAYGYQQGLLRCRSGSNQSDPEPLGLSPTITEDTLPAEQFTAMDPF
SLQMGRHDQNTGLHQLNHYMQSGLQRDGLAEENLY
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgactatttggtgcaactcctgcaagtgtcacgtcagagctccgtgcacctcgcatctt
ctgcccgaggatcaccgcagctccttctgcaggaggttcagatccaccaaaggagcgtcc
aaagcccgacgggaccacatcaatcatgagatcaggaatatgcgcaccctgttgcccatc
acccaggaggaccaggagcgtctctcctacctgcactccatggccgccatctgttcctac
atcaggaagtctgttctcttccagggactcccggccggggcgagatcacactgctctcct
ccatacgaggcctttcttccatccctgcacggcttcatcctggtcactaccgcacggggg
aggctggtctacgtgtccgagaatgtagaggaatatctcggtctgtccatgatagatgta
cttcaaggagacactttctacgacatggtggaacgctctgacattgatatcttgaaatca
aacctggactttgaacacaactcaccatcagagaggacctttatttgttgtatgcaaacc
tccaaggccttcaagctgcaacacggcagctgctgttccatgacggtcagagggagcttc
cgttcgttccctcagccgtggccgtcctcctcctcagtccgtcccaccagccagcctctg
ttcgtggctgtctgcacccccacggtcgaccggctgcggagctccgactcccacttctgt
gacagcttcagcagcgtccacagactcgatatgaccttcactcagctatcagacagcgtt
ttatattttttgggttattgggcagaagaaatgaccggtcggtcgtggtacagtcttgtc
caccctgaggatcttacattgagtgcagattctcatagaagtttagtgctggcagatgag
ggcttccaggtggaaatggtgctcagactccagtgcaaagatctgtcgtggacctggatc
tacattcgagctaacaaggagcctgagggccagggcctgagctgcaccaacttcctcatc
agtgaaacggaggccagatttctgcagaagaaaatcagctgtgatgccttcaggccatcg
cctctggcaaatcatgcaggtcaacaggcgcctcacgctcagacctacaacaacactaaa
tgcttaaaaagacagcggacgtccagcaaccaagacgaggagcctggtgccaaagctagg
agggagactgagcaagacttatactatatggtgtgcggctcctcccgaggtgatagctca
cctgctccctcgggagacagccctgctctgttcacccctccctacagcccggcctcctcc
agctccactctgcagcaggaggagctcagccatgacctcctgctggatgtgcatggatac
acagatcagctgctgtcctcccctgagggctctccctcctattactcctacccagaggca
gggctcacctgtcaccaatcaccctccggctcccttgcttcagccgctgaacaaacattt
gacccggcaggcttcggcgcccgctcaccgccctcctcctcatctccgtcctatgatttc
caagcttgtatggccgacgctcgattagtcccagactgcccgtccgtgtcggacatgtgc
gagagcccagtggactgtgctctgcatcccgacgacttcagcctcctcgagcagccacaa
gggggcggccttgtccaagtgcatcatgtcccctaccaggtgttgcccactcactccagt
cttctcacaccaagccaatctcccacatccacagaggcaccacattacaacgagagggag
caggcagagatcagtattctggctcagcagatctcctccctggccagcagctttgccatg
tatcacaccccaccctcagcctgcgactggccccgtcaccctccgctcccctcggccctt
cctcttaagcgtgagctggtactcgacgacggcatgttcgacagcatcctcaaagagctg
gacatgggcgtgagggaaagcagcatgtcctgccccggtgttgcagcatacggctaccag
cagggcttgttgcgctgcaggagtgggtccaatcagtcggacccggagcccctcggtctg
tccccgaccatcacagaagacacactgcctgcagagcagttcactgccatggatcccttc
agtttgcagatgggacgccatgaccaaaacactgggttgcatcaactcaaccactatatg
cagagtggccttcagcgagatggacttgcagaagaaaacctgtactga
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