Anoplopoma fimbria (sablefish): 129092579
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Entry
129092579 CDS
T09102
Symbol
rin2a
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129092579 (rin2a)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129092579 (rin2a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_2
Lpg0393_VPS9
RA_3
FERM_f0
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
129092579
NCBI-ProteinID:
XP_054456551
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All DBs
Position
6:complement(21327818..21370552)
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AA seq
1122 aa
AA seq
DB search
MSTSTISQPCKQERKGSFFKLIDSFAWEIGTLKKEMGKKKEPQEDHKTDPLLGLGEEVGG
LFLQASPCAGIGVGLAGARDSGYDSLHRRLSVLDRLVHTHAVWLQLGLSHQDAMRVLQSQ
PTGTFVVRKSSSLQRKVISVRMNKDSVVPVKDFPVKESQYTFSLVGSGLSFADLFRLVAF
CCISRDVLPFTLKLPEAIASAKTSADLEVVAKLGAGFWDAQACHRRKGSVSYSGIAAPER
PPPPVSSATSPGRPRLLTRTPSDLECSQSNGALCFINPLFIKVHQPDGDHSTTSNPSGTA
KRGLREEPVSDILETNNKDSQHACGDSPQVSSSDQSDSSQSGQGDLQSFDRNTELQDDNG
QTSSSSGQKISAKDSVRRSPPPRPPLPLIVSQRSAPVLRQRSMPEKIPWINVPKEKAEER
ERGSSLLSRLGSSLSISPSSSPPKRLNISSPISIPRPSLAISLSSLSSSPRRVKASPSSS
QEDAQCHLALEDQTIQKALMRARLCQLNATNTPAQESSSPIDPTLMTTSKQAGVTGGDEE
EAGEECSGGGQRLSDMSLSTDSSDSLDLSQSSVFFLPALHDPSPPTVADFDTHLPLSLPP
SHLPCCSTEDDDDDEDDDDEEEADYGVSLESDQDQDQDLTMVPPGHRTKRRPSASALVLQ
KALRGHLRKMSGVFNSLLTPEKRAIRRVVELSRDKGSYFGCLVQDYLSYMGEGAGTQAWQ
SYASGLELLQTLRQFITQMKSYLRQSSELEPPIESLIPEDQIDRVLEKAMHKCILKTLKP
VVSVALQEFQVRSGEWQELRENLALAKARQPQEMGVADTPPPDPVAIEKIKHKFHTMSKL
YSPEKKVTMLLRVCKLIYTIMEDNSGRLYGADDFLPMLTYVLAQCDMPQLDNEILYMMEL
LDPSLLHGEGGYYLTSAYGAMSLIRNFQEEQAARVLSSETRDTLHQWHRRRTTQRSAPSI
DDFQNYLRVALQELDSGCTAKTLQVRPYASVEEVCRLCAQKFKVADPENYGLFLLMEGSS
QQLAPDTHPQKIKAELHSRSQATPFHFVFRRLANGNASSPAPLDLLSNLNDLTVTSDPKA
NLNNLSMDLSAPSSQLALSSGLSPSLGLSLPPSHLNGNSISI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccagtaccatcagtcaaccctgcaagcaggagaggaaaggcagttttttcaag
ttgatcgactcatttgcctgggaaatcggcaccctgaagaaggaaatggggaaaaagaaa
gagcctcaagaagaccacaagacagatccactccttggactgggcgaagaggtgggaggt
ctcttcctccaggcttccccttgtgctgggatcggagtgggcctggctggagcgagggac
tctggctacgactctctccatcggcggctcagcgttctggacagactggtgcacacacac
gccgtgtggctgcagctgggtctcagccaccaggacgccatgcgtgtgctgcagagccaa
cccaccgggacgttcgtcgtgaggaagtcgagcagcctgcagaggaaagtcatatctgta
cgcatgaacaaagactcggtggttcccgtcaaagacttccctgtgaaggagagccagtac
actttctctttggtgggatcaggcctgagcttcgcggaccttttccgtctggtggctttc
tgctgcatcagcagggatgtgttgcccttcactctgaagctcccagaagccatcgcctca
gccaaaacgtctgccgatctggaggtggttgctaaacttggagcaggcttctgggatgcc
caggcgtgtcacagaaggaagggctccgtctcctattcaggaatagctgctcccgagaga
ccgcctccccctgtctcctcggccacctccccgggtcgcccacggcttctaactcgcacc
ccatcagaccttgagtgtagccagtccaacggagcactttgcttcatcaaccccctcttc
ataaaggttcaccaaccagatggcgaccacagcactacttcaaatccctctggtacggca
aagcgaggcctgagggaggaacccgttagcgacatcttagaaaccaacaacaaggattct
caacacgcttgtggagacagtcctcaggtttctagctcagatcaaagtgacagcagccag
tcaggtcaaggcgaccttcagagctttgacagaaacacagagctacaggacgataacggc
caaaccagcagcagcagcggtcagaagataagtgctaaggacagtgtgcggcggtcgccc
cctccacgtccacccctacctcttattgtgtcgcagcgctcagcccctgtgctccgacag
cgcagtatgcctgagaagatcccctggatcaatgtccccaaggagaaggcggaggaaagg
gagaggggtagcagccttctttctcgtctgggctcctcgctaagcattagcccctcatcc
tcccctcccaagagactcaacatcagctcccccatatccatccctcggccctctctggcc
atctctctgtcatccctctcctcctccccacgtcgggtcaaggcctcaccctcatccagc
caggaggatgcccagtgtcacttggcgctggaggaccagactattcagaaggctctcatg
agggccagactgtgtcagcttaatgctaccaatacccccgcccaggaatccagcagtcct
atagaccccacactgatgacaactagcaaacaggcaggtgtgacaggaggagacgaagaa
gaagcaggcgaggaatgcagcggtggcggtcagcggctaagtgatatgagcctttctacg
gattcctcagactctctagatttatcccagtcctcagtcttcttccttcctgctctgcat
gacccaagtcccccaacggttgctgactttgacacccacctccccctctccctcccacca
tcccatctgccgtgctgcagcacggaggacgacgacgacgatgaggacgacgacgacgaa
gaggaggccgactatggcgtcagccttgagagcgaccaggaccaagaccaggatctgacc
atggtgccgcctggccaccgcacaaagcgccgccccagtgccagtgctttggtcctgcag
aaagccctgcgagggcacctgcgcaagatgagcggggtgttcaactcgctgctgacgcct
gagaagagggcgatccgcagggtggtggagctgtccagggacaaaggctcgtacttcggc
tgcctggtacaggactacctgagctacatgggcgagggtgcgggcacccaggcctggcag
agctacgcctccggactggagctgctgcagactctccgccaattcatcactcagatgaag
agctacctgagacagagctccgaactcgagccaccaatcgagagcctcattcctgaagac
cagatcgaccgggtcctggagaaggccatgcacaagtgcatcctgaagactctcaaacca
gtggtgagtgtcgccctgcaggagttccaggtgcgcagcggcgagtggcaggagctgagg
gagaacctggcgctggccaaggcccggcagccgcaggaaatgggtgtggccgacacgccg
ccccctgaccccgtggccatagagaagatcaagcacaagttccacaccatgagtaagctg
tactcgcccgagaagaaggtcaccatgctgctgagggtctgcaagctcatctacaccatc
atggaggacaactcaggtcgtctgtatggtgccgatgacttcctgccaatgctaacctac
gtgttggcccagtgcgacatgccccagctggacaacgagatactttacatgatggagctg
ctggacccctctctgctccacggagaaggtggctactacctgaccagcgcgtacggagcc
atgtccctgattcgaaacttccaggaggagcaggcggccagagtgctgagctcggaaacc
agggacacgctccaccagtggcaccgccgacgcaccacccagcgctccgcaccttccatc
gacgacttccagaactacctgcgggtggcgctacaggagctggacagcggctgcacggcc
aagactctgcaggtccgaccatatgcctccgtggaggaggtgtgtcgcctgtgcgcccag
aagttcaaagtggccgacccagagaactacggcctgttcctgctgatggagggcagcagc
cagcagctggctcctgacacccaccctcagaagatcaaggccgagctccacagccgctcc
caggccacgcccttccacttcgtcttccgccgcctggccaacggcaacgcctcgtcgcca
gctcccttggacctcctgtccaacctcaacgacctcaccgtgacctctgaccccaaggcc
aacctgaataacctcagcatggacctgtcagccccctcctcccagctcgctctcagctct
ggcctcagtcccagtctgggcctcagcctgccacccagccacctcaatggcaactccata
tctatatga
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