Anoplopoma fimbria (sablefish): 129092614
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Entry
129092614 CDS
T09102
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129092614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129092614
Transporters [BR:
afb02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
129092614
SSDB
Ortholog
Paralog
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Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
129092614
NCBI-ProteinID:
XP_054456595
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Position
6
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AA seq
558 aa
AA seq
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MALNVPGLIVTIIFYLLVLGIGIWASIKSKRDENRMQANHADMALLGNRNINLVTGIFTT
TATWVGGTFIIGTAETVYNPKFGLIWAVMPLAATVAFIVGGYFFAEPMRDMKYVTMMDPF
QIKYGNAVSGLLSVAPLMSEIIWVTSTLISLGVTMSVILDLSYAVCIWISAAVAITYTLL
GGLYSVAYTDVIQLTLIFVTLWVCVPFVLMSPTSVDITTTSFNHTFQAPWVGTLTADRAW
MWIDIFLLLSIGDIGFQDFHQRTLSASSSATAKLRCYAAAFLIPTFGIPPVLIGAVAAST
DWNLTSYGSPSPFERDQTGLILPLSLQHLTPPYISVIGIGAVAAAVMSSTDSSLLSAASI
FSSNIYKKILRTEASENEIGWVIRISVVVFGLAGTSLTFLHAGVIAFWVMGGEIAYILMF
PQLVCVLFFNVSNGYGATVGFLVAFLLRVLCGETLLGLPPAIHFPGCTLEDGVYVQYSPI
RTICMLVAFATILLVSYLTALLFDKELIPEKWDVLKVKVQRAPQTQIPTDGASSKGNHNP
QPLCEDGGVSDPMLESNC
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaacgtcccgggactcatagtcaccatcattttctaccttcttgtgctcggt
atcggcatctgggcttccatcaaatccaaaagggatgaaaacaggatgcaggcaaaccat
gcagacatggctctgctgggtaacaggaacatcaacttggtaacgggcatcttcaccaca
accgctacctgggttggcgggaccttcatcatcggcacagctgagacggtgtacaatcca
aagtttgggctgatttgggctgtgatgcctttggcagcaacggtggccttcattgttggt
ggttacttctttgccgagccgatgagagacatgaagtatgtgaccatgatggaccctttc
cagatcaagtacggaaacgcagtgagtggacttctctctgttgcaccactgatgtcggaa
atcatttgggtgacatcaacactcataagcttgggagtaaccatgagtgtgatcctggat
ttgtcctacgctgtgtgcatctggatttctgctgccgtggccatcacctacaccctgctg
ggaggtctctactctgtggcctacaccgacgtcatacagctcactctcatctttgtcacc
ttgtgggtgtgcgtccccttcgtcctcatgagtcccacctccgttgacatcaccaccaca
tctttcaaccacaccttccaggctccctgggttggcacgctgactgcagacagagcctgg
atgtggatcgatatctttttgcttctgagtataggggacattggtttccaggatttccac
cagaggacattatcagcttcttcatcagccacagctaagttgcgatgttacgctgcagca
tttctcattcccacatttggaattcctcctgtgctcattggggcagtggctgcatcaacg
gactggaacctgacctcgtatgggtctccgtctccgttcgaacgagatcagacaggtttg
atcttacccctctccctgcagcacctaactccgccctacatctccgtcatcggcatcggc
gctgtggctgccgccgtgatgtcgtcgactgactcctccctgctgtcggcggcctccatc
ttctcctcaaatatctacaagaagatcctgaggaccgaggcatcagagaatgagatcggg
tgggtgattcgtatctctgtggttgtattcgggctggccggcacatccctcaccttcctg
cacgcaggtgtcatagctttctgggtcatgggtggagaaatcgcctacatcctgatgttc
ccgcagctggtctgtgtgcttttcttcaacgtatccaacggttacggtgccactgtgggc
ttcctggtggcgtttcttttgagagttttgtgtggagaaaccctgctagggcttccacct
gcaattcatttcccaggatgcacccttgaagacggtgtttacgttcagtattcccccatc
aggaccatctgtatgctggttgcttttgccaccatattgctggtgtcctacctgacggcg
ctgctcttcgataaggaactcataccagagaaatgggacgtgttgaaagttaaagtccaa
cgggcaccacaaacacaaataccaacagatggtgccagcagcaagggaaaccacaaccca
caacctctgtgtgaggatggtggggtctcagatccaatgttggagtcgaactgttga
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