Anoplopoma fimbria (sablefish): 129092730
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Entry
129092730 CDS
T09102
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129092730 (cdhr1a)
Cell adhesion molecules [BR:
afb04515
]
Cadherins
Cadherin related
129092730 (cdhr1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RibLong
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
129092730
NCBI-ProteinID:
XP_054456723
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Position
6:12726497..12737571
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AA seq
846 aa
AA seq
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METQADFAPYFYDNGPYIYNGNLALFSLSEDTAVGTQIYCLNGTDPEGQEVRYGLSFDPG
SKEYFRVDPKSGNITLVEQLDREKQDSINVLVSITDGRSKVVERVTVFVMDANDEKPEFQ
NMPAIIDVLETTESGSSIYKVEAVDRDTGSGGSVNFFLQNPQSTLFAMDRHSGVLRIKSG
EMLDYEKTKTHFVTVIAKDGGGNFNGKEQFMSSTATLTINVIDAQDTPPSFIGTPYFGYV
YEISVPGSEIFTVLAKDGDVGNPNPIRYSFEDGDDSVFSINKTSGCITLLTHPMYLKREV
FNIKVKASEVSPEGRLMDFGVTTMVIRVVDLNNNPPTFYGENGPQNMFELTMYEHPPEGE
ILRGLKITVNDSDQGANAKFNLRLIGPGRMLRVVPQTVLNEAQVTILVEDSSAMDYEKHQ
FLTYKLLAVEIDTPERFSATADIVIHLLDTNDNAPKFSSDYYIARIPENSPGGSNVVSVT
ATDPDSGPWGDVKYSIYGSGADLFLIQATSGIIYTQPWASLDAEVRSKYNFYVKAEDAEG
KYSLAEVFVTVLDLNDHPPAFNDNFQEKTMVIGVPVKIEAVDDDAEVPNNVIEYAIMKAE
PDNNIFDINADTGEIMLKSYIKSMAIIQNITKQTDCTWSLVVQARDRGQPSFSTTAVIKI
DITEATQLSGGPLGSFLMQNRNKPLQILGMLAGVISLMVIVTVVISTATFMRNKKSNRIL
PNRRVRRRIPKQQPWNFRNPFKVPETPGEKFRVEEEEPEVTVENVNYNNNVTNVVRQWPP
LPCAPSLPPPPPTYIPGERQWVVPTVSATVAPKPRKKPVMNRQDTVNLALVSELKMRLEQ
KRMLKH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacaagcagactttgccccttatttctatgacaatggaccctacatctacaat
gggaacctggcactgtttagcctctcagaggatacggctgttggtacacagatctattgt
cttaatggcacagaccctgagggacaggaggttaggtatggcctttcctttgatccagga
tccaaagaatacttcagggtcgaccccaaatctggaaacatcacattggtggaacagctg
gatagagagaaacaggattctattaacgttcttgtcagcatcacagatgggcgaagcaag
gttgtggaaagagtcacagtatttgtaatggatgcaaacgatgagaaacctgaattccaa
aacatgccggcaataattgatgtcctggaaacaactgagtctggcagcagcatctacaaa
gtagaggcagtggacagagacacaggctcaggaggctcagtcaacttcttcctccagaat
cctcagtccactttgtttgccatggacagacatagtggtgtcctgcgtatcaaatctgga
gaaatgttggactatgaaaaaacaaagacgcactttgtcactgtcattgcaaaggatggt
ggcggtaattttaatggcaaggagcagtttatgtcatccactgctaccctgacaatcaat
gtgatcgatgcacaggacacgccgccatcttttatcgggacaccctatttcggctacgtt
tatgaaatctccgtgccgggttctgaaatattcactgttcttgccaaagatggggatgtg
ggaaacccaaatccaatccgttattcctttgaggatggtgacgacagtgtttttagcatc
aataaaactagcggatgtatcacactgctgactcaccccatgtatctgaagagagaagtc
tttaacattaaagtcaaggcatcagaagtcagtcctgaaggcagactcatggactttggg
gtgaccacgatggtgatccgtgtggtggacctgaacaataatccccctactttctacgga
gaaaacggcccacagaacatgtttgagttgaccatgtacgagcatccaccggagggagag
atcctccgggggctgaaaatcactgtcaacgactccgatcagggcgcaaatgcaaaattt
aatcttcgactgatcggaccgggaaggatgctgcgagtcgtccctcagactgtactcaat
gaggcccaggtcacaatcttagtagaagactcttctgccatggactatgagaaacaccag
tttctcacatacaagctacttgcagttgagatcgatacgcctgagagattcagtgccaca
gcagacatcgtcattcatctcctggacacaaacgacaacgctcccaaattctcctcagat
tactacatcgccagaattccagaaaactcaccgggtggctccaatgtggtgtcagtcaca
gcaacagacccagactcaggaccttggggtgatgtgaagtactccatatacggatcaggg
gcggacttgttcctgatccaggctacatctgggatcatctacacccagccgtgggcgagc
ctggacgcagaggtgaggtccaagtacaacttctatgtaaaggcagaggacgcagagggg
aaatacagcctggctgaagtctttgtgactgtgttggacctgaatgaccacccacctgca
ttcaatgacaacttccaggagaagactatggtgattggagtaccagtgaaaatagaggct
gtagacgacgatgcagaagtaccaaacaatgtcattgagtacgccatcatgaaagctgag
ccagacaacaacatcttcgacattaacgctgacacgggggagatcatgctcaagtcctac
atcaagtccatggccattattcagaacatcaccaagcagacggactgcacctggtcgctg
gtggtgcaggctcgggaccgcggccagccttccttcagcacaactgcggttatcaagatc
gacatcactgaagctacccaactcagtggggggcctttgggatcatttttgatgcagaat
agaaacaagcctttgcaaatcctagggatgcttgctggtgtcattagtctcatggtcata
gtcacagtcgtcatctccactgcaacattcatgcgcaacaaaaagtccaaccggatcctg
cctaaccgccgcgtgagaaggaggattccgaaacagcagccctggaacttcagaaaccct
ttcaaggtaccagaaactcccggagagaaattcagagtagaagaggaagagccagaggtc
accgtggagaatgtcaactataacaacaatgtgacgaatgttgtgagacaatggcctccg
ctgccttgcgccccgtctcttcccccaccaccacccacttacatcccgggggagaggcag
tgggtggtaccaaccgtctcagcaacagtggcacccaaacctagaaagaagccagtgatg
aacagacaggacactgtgaacttagcgctggtctcagagctcaagatgagactggagcag
aagaggatgctaaaacattga
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