Anoplopoma fimbria (sablefish): 129092784
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Entry
129092784 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129092784
04082 Neuroactive ligand signaling
129092784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129092784
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129092784
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129092784
NCBI-ProteinID:
XP_054456781
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Position
6:complement(24455729..24475903)
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AA seq
521 aa
AA seq
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MERGLASPRCSASLRQTPLGISTDLKLLEAQAMQLAGFKVVSELEPISACDGQPGGQVCQ
ALSACILGNGALRRLRFHLGLLENSMLNAEVKEGEILPPTIQRLMKGYNKYLRPFFDNGP
VTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDT
FIVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLES
WGYNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAVYETGNYPKLVFHFELRR
SILYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNAN
CFIKAIDVYLGICFSFIFGALIEYAVAHFCTLTHVDAHILMYGHHLHDLDDEMNGILTTI
SNHNRAKRRKEAAETQTPAPASLELNVSPSSPSGSEPKPEAAXPKRTHWCLTTLATVRKV
IRSINCCHIKNPHHIDNYSRVTFPLSFVMVNLLYWTYYLYF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggcctcgcctcgcctcgctgctccgccagtctccgccagactccgctggga
atcagcacagacctcaaactgctggaggcccaggccatgcagcttgctgggttcaaggtt
gtgagcgagctggagcccatctcagcatgcgacgggcagcctggtgggcaggtgtgtcag
gcgctgtcagcgtgcatcctgggaaacggtgcactccgcaggctgcgctttcatctgggg
ttgttagagaactcgatgcttaatgcagaagtgaaggagggagagattctgcctcctaca
attcagaggctgatgaaaggatacaacaagtacctcaggcctttctttgacaatggtcct
gtaacggtgggtatgagcctggacattgccagcattgataccatctcagagatcaacatg
gactacaccgccaccatattcctccgccagcgttggacggacgagcgcctggtgttcgag
ggcaacaagagcctgagcctggacgggcggcttgtggagctgctctgggtccctgacacc
ttcatcgtggactccaagaagtccttcctccacgacatcaccgtggagaacaggctgata
cgcatcttccccaacgggaccgtcctgtacgcgctaaggatcaccaccactgtggcctgc
aacatggatctgaccaagtatcccatggacaagcagacctgcacgctgcaactggagagc
tggggttacaacatcaacgatgtcatgttctactggaccagaggaaacgagtccgtcagc
ggtttagacactctacagctggctcagtacacagtggaggaccactacacgtccgtctca
gaggccgtttatgaaaccggcaattaccccaagctggtgttccactttgagctgaggagg
agcattctgtacttcatcctagagacctacgtcccctccagcctgcttgttgtcctctcg
tgggtgtccttctggatttccctgtcctctgttccagcacgaatatgtataggagtgacc
acagtactgaccatgaccactctgatgatgggggccagaacgtcactgcccaacgccaat
tgcttcattaaggccattgacgtttacctgggcatctgcttcagcttcatattcggggcg
ctcattgagtacgccgtggcccacttctgcaccctcactcacgtcgatgcgcacatactc
atgtatggccaccacttgcacgacctagacgacgagatgaacggcatcctcaccaccatc
tccaatcacaacagggccaagagacgcaaggaggccgccgaaacccagaccccggcgccc
gcctccctagaactcaacgtcagcccgtccagcccctcgggcagcgagcccaagcccgag
gcggcgnncccgaagcgcacccactggtgcctcaccactctggccaccgtccgcaaagtg
atccgctccataaattgctgtcacataaagaacccccaccacatagacaactactccaga
gtcaccttccccctctcgttcgtcatggtcaacctgctctactggacgtattatctgtac
ttctag
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