KEGG   Anoplopoma fimbria (sablefish): 129092793
Entry
129092793         CDS       T09102                                 
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03440  Homologous recombination
afb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    129092793 (brca2)
   03460 Fanconi anemia pathway
    129092793 (brca2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afb04121]
    129092793 (brca2)
   03036 Chromosome and associated proteins [BR:afb03036]
    129092793 (brca2)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129092793 (brca2)
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    129092793 (brca2)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     129092793 (brca2)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     129092793 (brca2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     129092793 (brca2)
SSDB
Motif
Pfam: BRCA-2_helical BRCA2 BRCA-2_OB3 BRCA-2_OB1 BRCA2DBD_OB2 Tower BRCA2_TR2
Other DBs
NCBI-GeneID: 129092793
NCBI-ProteinID: XP_054456793
LinkDB
Position
1:24704535..24718752
AA seq 3043 aa
MVCHIKKLEELLKSTRMDLPSKNMYETYKDEIWKELGPLDPNWFEALTSQMFTEGNVSDQ
DDLCGNQEANFKTPFDKTAVDSQLFSTPKVFRHRRVVSPETEDEQSFTAEQEKETLPWTT
SQSPYLFPMSKEIPGAKYGGFHPKSHDSLDLLHTPQKSPVNYDKHISESLGAQLHPDMSW
TSSLNTPPAVPSTLILSKTDESPCPVSVSADKNVVFVRKLFPSLSNASRVGVVSPKNNDI
PTVPQGVVSPEAGQDPESHDSTQSSLNQSDLVWKQTLPDAIEDGEIRRTVASVLDGAENV
LSIFFSNSSSALRKVKTDRIKRKHIIPTKEHCGSSTDVTSTNNAASSDQRTADQEPGRLP
SPPPGKSVDNGITQWSPLSLSELPPCTVHTSCHDKSPAVQVETNISTEQLQRDSEFGQLV
VGPPLKHTDSGFTKKKRQFVYTVETSKPKVQGKQTQCQRMDSSPAVPDTGQEVNVNQLKA
PDKADCCSTGMNEMQKQGNLADVNLRPSVQAKVQDLDMSQLCKDFAQDFSQMSDPCKLNQ
VPEVTPGNGFSPSACLSAMKRAKQKAMQANPHLDCDGVGDRTHVSTAHQNNHINEVTISD
SGFQSAVADGTHGTASSFVLPSSEINVLQWTDKHRTTPEVTSTNKGKGKAYLDDILQAAE
TDAKQPSAIRESQTLGPGRDGELHIESTPAKRPSSAKGAVDNINCISLNGQARGNLPEKT
VYLPSIHASGFKTASNKGIRISSSNLERAKRLFEETEGEITSSDQPIKCAHNAKDEMSVS
HRSVKNPTTNSNQPFSSSETKEDIRCQLTASQKADVTELCTLLEEAESQFEFTQFKTEKP
KQHIQDNATSPLKVDKELDPDFLSGIDFDDSFSSEAEKHLAATVMPDKMTSISDGKTNCE
TSDVTSKSTGLSLSSAMKKESSFPEEVSSFSKHISEGSSGVMTAEPKNLYGGGHSETSKL
QNPLMLGVGFKTAGGNVLRVSRKCLSKARALFSDLEENLVTGQTSPDKQSSGTDEKRQIR
RSVDIPTGNFLHHKEDDSTFTGCGNDIERKVQGCLANTKESVCSDIQITGIREEDAAKSF
INGKRDKTTCQSGFQMASGKGISVSAKAMQAADALFRDCDSIDSNAVSHEETLPKCEVQG
MKVNFSKEPISEFTNVNAGSAARHTEVAQHNKEIHNLGFTKTLPLTNAASFLGNPSSTAK
TLPALSWTTSKNTGSSAINELCNSGGFCADSGNKALMSADALKKAECLLNEIRTPEDAKK
QLKDKEDALRTGRLANQIQVSPPKSVGFQTASGKGVAISSTALKKAKLLLSECDEVEDKI
GLKPTHSKMPVPGPTPRNSGFLAASGKHVAFSSEALQKAKALFSDISFSAEIPAVSDTRS
SDKTQGDAENTEKIHCGFTTAGGAKVHVSQKHLLKAKNILTEFDDGSLSAKAMQEADAFF
KDCEILDGNDGMSAKQNKSIAPLCRSGSEKKNLSKCKEDQRLKINISEDLGKGQTELENV
NMGLVENHENMLHPNDVENHKGAFNNTLDFSNTAALHGNPSLMTKTLSPLLFTTSKNSSS
SAMKELSKGGGFSTASGKKVSVSDDAMTKAKSLLNESTTLEDTNKQLKQNVNTFPPQTGG
FQTASGKGVAISSEALKKAQTLLSECDEVEDQIFVKPTHPKMPVPGPTPRNSGFLAASGK
HVAFSSEALQKAKALFSDISFSAEIPAVSDARSSDKTQGDAENTEKIHCGFTTAGGAKVH
VSQEHLLKAKKILTDFADVECHDSNSTSPHDIRKSDLSNVKDVKRTCNPTTASDEDMFSA
PHNSRVDDCTLIKEQAHADAFRLKEGKITPAGLGDLHDGPVEKMSCVLDYEIKQTNSREG
SKGKRPQVSSALNFQSLNLSGCTETQQKLFAQEALDCTKALLEDESLSDRSLSMTLDNVP
LQENPKYSHRSVEDRQGTGKRSAEDPDMTGQPPLKRRLLEEFDRTVDGPRGSTLHPEKSC
PNGLMKDRRIFKYSVSLHPNITRPHTSGNYCVETRLQNTTPTQSSIPEESRSAHSKKPAF
VPPFLTNTKTEGRKNTMLKDNARTPSAFVPPFKKQRTIVQESSSKPQVEEKEDKHHHLFV
TPFNSNTYVPPTKKPQSTTELTGNKSKEDPETVALAENTNDKLMNNQNLPVGCGSEDSAA
ETSHVEDKLFRCQDTFQNLHNVELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVTRIP
LKAAVNGRPPARYTPKQLYGHGVHQHVCEISSETAESFRFDLKQFLKQIALLDGGGVQLA
DGGWLIPSKDWTAGKEEFHRALCDTPGVDPKLISEGWVYNHYRWIVWKQASMERSFPELM
GSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMEQDDTAAKTLVLCVCGVFSRGHSPNR
QSINDTKTPQSADVKVENPFAVVWLTDGWYAIKAQLDEPLTAMLHKGRVAVGGKLIIHGA
QLVGSQEACSPLEAPESLMLKICANSSRPTRWDAKLGFHKDPRPFLLPVSCLYSGGGPVG
CVDIVVLRSYPIQWMERKPDGGVVFRSVRAEEREARRYNGHKQKAMEILFGKIQEEFEKE
DKGHNKPQHRRRTISRQGISSLQAGEELYEAVGDDPAYLEAHLSEQQMETLRTYRLSLME
KKQAELQDRYRRALESAEDSEGSCPKRDVTPVWRLCVADSLEERGSVYQLNLWRPSSDVQ
SLLKEGCRFKVYNLTTSDGKKHGASTSVQLTGTKKTQFQDLQTSQEWLSRCFQPRVSTCF
VDLQNPEFQLLCEEVDLTGYVISIIDGQGFSPALYLADGKLNFVKVRCFSSFAQSGLEDL
VKPRVLLALSNLQLRGQSSSPTPVVFAGDLTIFSTNPKEYYLQESFSQNRSLVQNLKNFF
PAAEEKLSHLVKSDGRGSISSPAQTAAFSTVRRQDTNTSVTSQQPVRSLGSFTPVGRKPP
AANCSTEKDPSSMKRKRSLDYLSRIPSPPPLLHLGSVASPCVNKTFNPPRRSGTPSTLMT
VQTPAHKPVSSPVEDEWVNDEELAMIDTQALRVGDLLQVHKAV
NT seq 9132 nt   +upstreamnt  +downstreamnt
atggtgtgccacataaaaaaacttgaagagttacttaaatcaactagaatggatttaccc
tcaaaaaacatgtacgagacatataaagatgaaatctggaaagagctgggacccttggat
cccaactggtttgaggcactgacatctcaaatgttcactgagggaaatgtctctgatcaa
gatgacctgtgtgggaaccaagaggcaaactttaaaacaccctttgacaaaactgcagta
gacagtcagctgttctcaacgcccaaagttttcaggcaccgtcgagttgtgtcacctgaa
actgaggatgagcagtcgttcactgctgaacaagaaaaagaaacattgccatggacgaca
tcacaaagtccatatttgttcccgatgtcaaaagagatcccaggtgcaaaatatggaggt
ttccatcctaagagtcatgacagtcttgatctgcttcataccccacaaaaatccccagtc
aactatgacaaacatatatctgaaagtctcggagcacagcttcatccggatatgtcatgg
accagttctctgaataccccaccagccgtaccatccaccctaattttatctaaaacggat
gagagtccctgtccagtgagtgtttctgcagacaaaaacgttgtttttgtacggaagctt
ttcccctctctttcaaatgcatccagagttggagtggtgtcacccaaaaacaatgacata
cctaccgtcccccaaggtgttgtttcccctgaggcgggtcaggatccagagtcccatgac
tccacccaaagttcactgaatcagagtgaccttgtttggaaacagacacttccagatgct
attgaggatggagaaattcgcagaacagtagcaagtgttcttgatggagctgaaaatgtt
ctctctatatttttcagcaacagtagctcagcacttaggaaagtgaaaactgacagaatc
aaaagaaagcatatcattccaacgaaagaacattgcggcagctctacggacgtcacatca
acaaacaatgctgcatccagtgatcagagaacagctgatcaggaacctggcagacttccc
tcacccccaccagggaaatctgtagataatggaattacccagtggtctccgttaagttta
tctgaactcccaccgtgtactgtgcatacgtcttgccatgataaaagtcctgctgtacaa
gtggaaaccaatatttcaacagaacaactgcagcgtgactctgaatttggccagctagta
gtggggccgcctttaaaacacacagactctggatttaccaagaaaaaaagacaatttgtt
tacactgttgagacctcaaaaccaaaagttcaaggaaaacaaacgcagtgtcagaggatg
gactcatcaccagcggttccagatacaggacaagaagtgaatgtgaaccagttgaaagcc
ccagataaagcagactgttgcagtaccgggatgaatgagatgcaaaaacagggaaatctc
gctgacgtaaatctacgtccttctgtacaagcaaaggtccaggatcttgacatgtcgcag
ctttgcaaagattttgcacaagatttcagtcaaatgtcagacccctgtaaattgaatcaa
gtaccagaggttactcctggaaacggcttctctccatcagcttgtctgtcagccatgaaa
cgagctaagcagaaagcaatgcaagcgaaccctcaccttgactgtgacggcgtcggtgac
agaacacatgtttctaccgctcatcaaaataaccatatcaatgaggtaacaataagtgac
agtggattccagtctgctgttgcagatggcactcatgggactgcatcatcatttgttctt
cccagctcagagatcaatgttctacagtggactgataaacacaggaccactcctgaggtc
acatctacaaataaagggaagggaaaagcctatttggatgatattttacaagcagctgaa
acagatgccaagcagccaagtgcaatcagggaaagccagacactgggccctggcagagac
ggtgagttgcacatagagagcacaccagcaaaaaggcccagcagtgccaaaggagctgtc
gacaacattaattgcatttcacttaatggtcaggctcgtggcaatctgccagagaaaacc
gtttatcttccttccatccatgcatcaggattcaaaacggcttcaaataagggtatacgc
atttcttcatccaacctggagagagccaagcgtctctttgaagagactgaaggggaaata
acttcaagtgaccagcccatcaaatgtgcccacaacgctaaagatgaaatgagcgtgagt
cacagatcagtgaaaaatccaaccactaactcaaaccagccattttcttcaagtgaaacc
aaagaggatatccgttgccagttaacagcttcacaaaaagctgacgtgactgagctgtgc
actctcttggaagaagcagagagccagtttgaattcacacagtttaaaactgaaaagccg
aaacaacacattcaagataatgccacctctccactaaaagttgacaaagaacttgaccca
gattttctttcgggtatagattttgatgacagttttagttcagaagctgaaaagcacctg
gcagccactgtgatgcctgacaaaatgacctccatttcagatggtaaaacaaactgtgaa
acatctgacgtcacaagtaaatccacaggtttgtcgttgtcgagcgcaatgaaaaaagaa
agttcctttcctgaagaggtgtcttccttttcaaagcacatctccgaaggcagttctggt
gttatgacagctgaacccaaaaatctttacggaggtggtcacagtgaaacgagcaagctg
cagaatcctttaatgcttggtgttggatttaagacagcaggaggaaatgttttgagagtt
tcaagaaagtgtctgagcaaagctagagctttgttttcagatttggaggagaaccttgtg
acgggtcaaacatctcctgacaagcaaagcagtggaaccgatgaaaaaagacagattagg
cgcagtgtggatattccaactggtaactttctgcatcataaagaggatgattctacgttc
acaggttgtggtaacgatattgagaggaaggttcagggctgtttggccaacacaaaggag
tctgtctgttcagacatacagatcacaggcataagggaagaagacgctgcaaaaagtttc
ataaatggcaaaagggacaaaaccacgtgtcaaagcgggttccagatggccagtgggaaa
gggatttctgtttcagcaaaagctatgcaggcagcagacgctctcttcagagactgtgat
tctattgacagtaacgctgtcagtcatgaggaaactcttccaaaatgtgaagttcaagga
atgaaagtaaacttttctaaagagccaatcagtgagtttacaaatgtgaatgctggatca
gctgctcgccatacagaggttgcacaacataacaaggagattcacaatttaggttttacg
aaaacactgcctttaacaaatgcagcctccttccttggaaacccgtcttcgactgcaaag
acacttccagctctttcatggacaacatcaaagaacactggctcctctgccatcaatgaa
ttgtgcaatagtggtggattttgtgcagacagtgggaacaaagctttgatgtcagctgat
gcactgaaaaaagcagaatgtctcttgaatgaaattcgtacacctgaggacgcaaaaaaa
caactgaaagataaagaggatgctttaagaaccggccgtctcgccaatcaaattcaagtt
tcaccacctaaaagtgttggatttcagacagccagtggcaaaggagtggccatttcatcc
acagctctcaagaaagcaaaactgttgttgagtgaatgtgatgaagttgaggataaaatc
ggtttaaaaccaacgcattccaaaatgccagttcctggtccaacacccaggaatagtgga
tttcttgcagccagtgggaagcatgtggcattttcatctgaggccctccagaaggcaaaa
gctctcttcagtgacatcagcttcagtgcagagatcccagctgtttcagacacaaggagc
agtgacaagacacaaggcgatgctgaaaatacagagaaaatacattgtggtttcacaact
gcagggggagctaaagtccatgtgtcacagaaacatctgctgaaagcaaaaaacattttg
acagaattcgatgatggttctctttcagcaaaggcaatgcaagaagcagatgctttcttc
aaggactgtgaaatactggatggtaatgatggtatgtcagctaaacaaaataaaagtata
gcacctttgtgcagaagtggcagcgagaagaaaaacctttcaaaatgtaaagaagatcag
aggttgaaaataaacatctctgaagatcttggaaagggacaaactgaacttgaaaatgtg
aacatgggattagttgaaaaccatgaaaatatgctgcatcctaatgatgtggagaatcac
aaaggtgcttttaacaatacattggatttttccaacacagctgctttacatggaaaccca
tctttgatgacaaagaccctttcccccctgttgttcacaacatcaaagaacagtagttcc
tccgccatgaaagaattgagcaaaggtggtggattctccacagccagcgggaagaaagta
tccgtgtctgatgacgcaatgacaaaagcaaagtctcttttgaatgaaagtactacatta
gaggacacaaacaaacaactgaaacaaaatgtaaacacctttccaccacagactggggga
tttcagacagccagtggcaaaggagttgctatttcatctgaagccctaaaaaaagcacaa
actctgttaagtgaatgtgatgaagttgaggatcaaatctttgtaaaaccaacccatccc
aagatgccagttcctggtccaacacccaggaatagtggatttcttgcagccagtgggaag
catgtggcattttcatctgaggccctccagaaggcaaaagctctcttcagtgacatcagc
ttcagtgcagagatcccagctgtttcagacgcaaggagcagtgacaagacacaaggcgat
gctgaaaatacagagaaaatacattgtggtttcacaactgcagggggagctaaagtccat
gtgtcacaggaacacctgctgaaagcaaaaaaaatattgaccgattttgctgatgttgaa
tgtcatgattcaaactcaacaagcccacacgacatccgtaagtcagatctatcaaatgtg
aaagatgtgaaaagaacctgtaatcccaccacagccagtgacgaggacatgtttagtgct
cctcataattcgagagttgacgattgcactttaatcaaagagcaggcacatgcagatgca
tttaggttaaaagaaggcaaaattaccccagcagggttgggcgacctccatgacggccct
gtagagaaaatgtcatgtgtgttggactatgagataaagcagacaaacagcagagagggg
tctaaggggaaaaggccacaggtgtcttcagctttaaactttcagtcactaaacctaagc
ggctgcactgaaacccagcagaagttgttcgcccaggaagctctggactgcactaaagcc
ttgttagaggacgaaagtctctctgaccgaagtctctcaatgactttagacaatgtgccg
ctgcaagaaaaccccaaatacagccacagatctgtagaggaccgacaggggacagggaaa
agatcagcagaggaccccgatatgactggtcagcctccccttaaaagacgattactggaa
gagttcgacagaactgttgatggtccaagaggctccaccctccatccggaaaaaagttgt
ccaaatggtctgatgaaagacagaaggattttcaagtacagcgtctctctccatccaaac
atcacgaggccacacaccagtggaaactactgtgtggaaaccagattgcaaaatactaca
ccaacacaatcctcaatcccagaagaaagcagatcagcacattccaagaagccagcattt
gttcctcctttcctcacgaatacaaagacagaaggtcgtaagaatacaatgctcaaggac
aacgcaagaacaccttctgcatttgttcctccattcaaaaaacaaagaactattgtccaa
gagagctcctccaaaccacaggtggaggagaaggaggataaacaccaccatctctttgta
acgccctttaacagcaacacgtatgtaccgcccactaaaaaaccccaaagcactacagaa
ttaactggtaataaaagcaaagaagaccctgaaacggtggccttggcagagaatacaaat
gataaactgatgaataatcaaaacctccctgttggctgtggatcagaggactctgctgca
gagacatcacatgtggaggacaaattgttccgatgccaagacacatttcagaatcttcat
aatgtagagctggcacgagatatgcaagacatgaggatcaggaaaaaaaagcgccagacc
attcgacctttgccaggaagtttgtttctaaccaaaacctcaggagtgactaggattcca
ttaaaggctgcagttaatggaaggcctcctgcaagatacaccccaaaacagctgtatgga
cacggagttcatcaacatgtgtgtgagatctccagtgagactgcagaatcttttcgcttc
gatttgaagcagttcctcaaacagatagctcttctagacggaggtggtgttcagcttgct
gatggaggatggctaatccccagcaaggattggactgcaggaaaagaagagtttcataga
gcattatgtgacaccccaggtgtggatcctaaactgatcagtgagggttgggtgtacaat
cactaccgatggattgtgtggaagcaggcgtccatggaaagatcatttccagaactaatg
ggcagcctctgtctcaccccagagcaggttctcctgcagctgaagtacagatatgatgtt
gaggtggaccacagccgcaggccggctctaagaaagatcatggaacaggacgacacagca
gctaaaaccctggtcctctgtgtctgcggggtcttctccaggggtcactccccaaacaga
cagagtatcaatgacaccaagactccacaaagtgctgatgtcaaggtcgaaaatccattt
gcagttgtctggctgacagacggatggtatgccattaaagcccagctggatgaacctttg
accgccatgcttcacaaaggtcgagtggctgtcggtggcaaattgatcatccatggggct
cagctggtgggatcacaggaagcttgttcccctctggaggcacctgaatctctcatgtta
aagatttgcgccaatagcagcagaccaacacgatgggatgcaaaactgggatttcacaag
gatccaaggccattcctgcttcctgtctcctgtttgtacagcggcggaggaccagtagga
tgtgtggacattgtcgtactgagaagctaccccatacagtggatggagaggaaaccagat
ggaggcgttgtcttccgatctgttcgtgccgaagagagggaggcgagacgatacaacggc
cacaaacaaaaagctatggagatcctgttcggcaagattcaagaagaatttgaaaaggag
gacaaaggtcataacaaacctcaacatagaagacggacgatcagtcgtcagggtatttcc
agtcttcaagctggagaggagctgtatgaagcagtgggggatgacccagcttacctcgag
gctcatctgagtgagcagcagatggagaccttacgcacctacaggctttctctgatggag
aagaagcaggctgaactacaggatcgctaccgacgagctttagaaagtgcagaggacagt
gaaggtagctgtcccaagagagacgttacacctgtgtggagactctgtgttgctgattcc
ttggaagaacgcggcagtgtttaccagttgaacctttggcgaccctcctctgatgttcag
tctttactgaaggaaggctgtcgattcaaagtctataatctcaccacttcggatggaaag
aaacatggtgccagcacatctgttcagctgactgggacaaagaaaacacagtttcaggac
ctacagacttctcaggaatggttatcaagatgtttccagccaagggtctctacctgtttt
gtggatcttcaaaaccctgaattccagttgctgtgtgaagaagttgatctcacaggatat
gtaatcagtatcatagatggacagggtttctctcctgcattgtatttggctgatgggaaa
ctcaactttgttaaagtgcgctgtttcagcagctttgctcagtctggcttggaggatttg
gtaaaaccacgtgtcctgttggctctgagcaacctgcagctgagaggtcagtcctcctct
cccactcctgttgtgttcgctggagatctgaccatcttctcaacaaaccccaaggaatat
tacctccaggaatccttcagccaaaacagaagcctggtccagaatctgaaaaacttcttt
ccagctgctgaggagaagctttcacatttagtcaaatctgatggccgggggtccatctct
tctccagctcaaaccgcagctttttcaacggtcagaagacaagacacaaatacaagtgtg
acgtctcagcagccagtcagaagccttggttccttcacacctgtcggcaggaaaccccct
gcagcaaactgttcgacagagaaggaccctagcagcatgaagaggaagagatctctggac
tacctgtctcgtatcccgtctccaccacctctcctccatctgggctcagtggcttctcca
tgtgtaaataagacattcaacccccctcggaggtctgggacacctagcactttaatgact
gtacagactccagctcacaaacctgtcagttcaccggtagaggatgaatgggtgaatgac
gaggaactggctatgattgatactcaggctttgcgtgttggtgatttattgcaggtacat
aaggctgtgtga

DBGET integrated database retrieval system