Anoplopoma fimbria (sablefish): 129092809 Help Entry 129092809         CDS       T09102                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     129092809 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:afb03400]     129092809 (msh6) DNA repair and recombination proteins [BR:afb03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      129092809 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  129092809 NCBI-ProteinID:  XP_054456808 LinkDB All DBs Position 6:complement(16633912..16642152) Genome browser AA seq 1387 aa AA seqDB search MAKQSSIFKFFTKSPPPVSKTKPKPKPSPTEADLPSSVVKSNSSPKEQAKQTPQQPTKTN KTKQKSNDKSSKGGFSKLFGDKAAAAKQSNTCAFSAGALVWAKLEGHPWWPCMVVPQPLT GQQMRGRGRSQRIHVHFFDEPATRGWVSTKFIREYQGSDSSDAKTGGVFFSGKPSIRRAV ELADEVMFDSPEKRLKMPVCMDPSDEEEEEDDEEDDEEEEMELDKSITTDEEGSDEEEQK NEKVKSSKVSLRSSLASTEEGNKAKRRRIIVASDSDGSDEEFKPEKQAASSSEEEEEVAT VSSDEESAHESDAESPIKPVKRKRPAEKPASTKPKVPTTPSSAPKRAPAAIPVDTKSRLS AFSATDSFESQANGSGASGGATVWDHEKLEWCQDGRRKDRRRRRQTEDDYDPSTLYVPED FLNRVTPGMRRWWQLKSEMLDTVIFYKVGKFYELYHMDAVVGVNELGLTFMKGTWAHSGF PEIGFGRFSDGLVQKGYKVARVEQTETPDMMEARCKKMAKPTKYDRVVRREVCRIITRGT QTYSVLDGAPSESQSKFLLSLKEKAEEESSGCCRSYGVCFVDTSVGCFYVGQFPDDRHCS RLRTLIAHFSPAEVLFEKGNTSVETRKILKASLSSALQEGLNAGSQFWDAQKTLKTLSEE DYFRETAGEDQEKGTNFLPALLKKMTSESDSLCLTPKEGYELGLSALGGCIFYLKKCLVD QELLSLANFEEYVPVDVELEKAAGPASFFAQTRQRMVLDGVTLANLEIFQNGSGGTEGTL LERLDTCSTPFGKRLLKQWLCAPLCNPTSIKDRLDAVEDLMGAQAQATEVSDLLKKLPDL ERLLSKIHSIGTPLKGQDHPDGRAVLYEEVTYSKRKIADFLSALEGFKTMQEIITVLAPV SGESQSALLRQVASLKSDEDGLFPDLSAELRRWETAFDHQKARTTGVITPKAGFDPEFDQ AQTSIKSCERELQDYLERQKKRLGCKNMSYWGTGRNRFQMEVPDSVSERNIPEEYDVKST KKGWKRYVTNETERLFSELQGFEEKRDASLKDCMRRLFYNFDKNYKDWKTAVECMAVIDV LLALSRYSQGGDGPMTRPQVVLPKGDDQASTFLDLAGSRHPCVTKTYFGDDFIPNDVFIG CPGSGETDEGKENASCVLVTGPNMGGKSTLMRQCGLVIILAQMGCYVPAESLRFTPVDRV FTRLGASDRIMAGESTFFVELSETASILHHATKHSLVLLDELGRGTATYDGTAIASAVVK ELAEKICCRTLFSTHYHSLVEDYANNPAVRLGHMACMVENECEDPSQETITFLYKFITGA CPKSYGFNAARLASLPEEVIQSGHRKAKEFEKSTISLRLFKKLCQFAEDATLDNTHFSSL VQMLNTV NT seq 4164 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagctccattttcaaatttttcaccaagtctccgccgccggtgtccaag acgaagccgaagccgaagccctcaccgaccgaggcggacctgccttcctcggtagtgaag tccaactcctctccgaaagagcaagctaagcagacaccacaacaaccgaccaagaccaac aaaaccaagcagaaaagtaacgacaagtcctcgaaagggggatttagcaaactatttggc gacaaggccgcagcagctaaacagagcaacacatgcgcattcagtgctggtgcccttgtg tgggcaaaactggagggacacccctggtggccatgcatggtggtgccccaacctctgaca ggacagcagatgaggggccgcggtcggagccagcgcatacatgtccacttctttgatgaa cccgctactcgaggatgggtcagcaccaaattcatcagagagtaccaaggttctgacagc agtgatgctaaaacgggaggggtgttcttcagcggcaaaccttcaatccgtcgtgcagtg gagcttgctgatgaagttatgtttgacagccctgaaaaaagactaaagatgcctgtctgc atggatccgtctgatgaggaggaggaggaggatgatgaagaggatgatgaggaggaagaa atggagcttgacaagtcaataacgactgatgaagagggcagtgatgaggaagaacagaaa aatgagaaagtgaagtcgtccaaggtcagcctgcgttcatcccttgcttcaactgaagag ggaaataaggccaagcgccgccgcataattgtagcttccgacagtgatggatcagatgag gaattcaaaccagaaaaacaggctgcgtccagcagtgaggaagaggaggaggtagcgacg gtgagcagcgacgaagagagcgcacatgagtcagacgcagaaagccccatcaagcctgtg aagcgcaaacgcccggcagaaaagcctgcttctacaaaacctaaggtgcccaccaccccg tccagcgctccaaaacgagctccagcagccatcccagtcgacacaaagtcccgtctgtcg gccttctccgcaaccgacagctttgagagccaggcaaacggatccggcgccagtggaggc gccacagtttgggaccatgagaagctggagtggtgccaggatggaaggaggaaagacaga cgaaggcggcgacagacggaggacgactacgatccctccaccctgtacgtgccagaagac tttctcaacagagttactcctggtatgcgtcggtggtggcagctcaaatccgagatgttg gacacggtcattttctacaaggtggggaagttttatgaactctaccacatggacgccgtg gtcggagtcaacgagctgggactaactttcatgaaggggacctgggcgcactcgggcttc ccagagatcggcttcggtcggttctcagacggtctggtccagaagggctacaaggtggct cgggtggagcagaccgaaactccagatatgatggaggcccgctgcaagaaaatggctaag cccacaaagtatgaccgcgtggtgagaagagaagtgtgccgcatcatcactcgtggtacc caaacctacagcgtgttggacggtgctccttctgagagtcagagcaagttcctgctgagt ttaaaggaaaaggccgaggaggaaagctcaggttgttgccgtagctacggagtctgcttt gtagatacctctgtgggttgtttttatgtcggtcagttcccagatgatcgccactgctca cgtctgcgcaccctgatagcacacttctcccccgccgaagtgctctttgaaaaggggaac acgtccgttgaaacgcgcaaaatactcaaggcctccctgtcctctgctctgcaggaagga ctcaacgcaggctcccagttctgggacgctcaaaagaccctgaaaaccctttcagaagaa gattacttcagagagactgctggcgaggatcaggagaaggggaccaactttcttcctgct cttctaaaaaagatgacctctgagagtgattcgctgtgcctcacccctaaagagggctat gagctgggactgtcggccctgggcggatgcattttctacctgaagaaatgtctcgtcgac caggagctgctctctttggccaactttgaagaatatgtccctgttgatgttgagctggag aaagctgctggacctgccagtttctttgcccagactcgtcagcggatggtccttgatgga gtgactctggccaacttggaaatctttcagaatgggtcaggaggaaccgaagggaccctg ctggagcgtctggacacctgctccaccccgtttggcaagaggcttctgaagcagtggctc tgcgctcctctgtgtaaccccacgtccatcaaggacagactcgatgcagtggaggacctg atgggggctcaggcccaggctactgaggtttcagacctgctgaagaagctcccggatctg gagcgtcttctgagtaaaatccacagcatcggcactcctctgaagggccaggaccaccct gacggcagagcagttctctatgaggaggtcacctacagcaagcgcaagatagcggacttc ctctccgctctggaaggtttcaaaactatgcaggagatcatcaccgtcctcgctccagtg tcgggtgaatctcaatccgcgctgctccgtcaagttgccagtctgaaaagcgacgaggac ggcctctttcccgacctctctgccgaactccggcgctgggagacggccttcgaccaccag aaagcccgcactactggtgtcatcacccccaaagccggctttgacccggagttcgaccag gctcagacatcaatcaagagctgcgaacgggagctgcaggattacctggagagacagaag aagaggctcggctgtaagaacatgtcgtattggggaaccgggcgaaaccgcttccagatg gaagtgcctgacagcgtctcggagaggaacattcccgaggagtacgacgtgaagtccaca aagaaaggctggaagcgttatgtgaccaacgagactgaacggctgttctcagagctgcaa ggattcgaggagaagagagacgcttccctgaaggactgtatgaggaggctcttctacaac tttgacaagaactacaaagactggaagactgcggtggagtgcatggcagtgatcgacgtg ctgctggccttgtcccgctacagtcagggcggagacgggccgatgaccaggcctcaggtg gtgctccccaagggtgacgaccaggcatcgaccttcctcgacctcgccggatcgcgccac ccctgtgtcaccaagacctattttggcgacgacttcatccctaatgacgtctttatcggc tgccctggtagcggtgaaaccgacgaggggaaggagaacgcctcctgtgtgctcgtcacg gggcccaacatgggcggaaagtctactctcatgagacagtgtggacttgtcatcatacta gctcagatgggttgctacgttcctgccgagagcctgcgcttcacaccagtcgacagggtc ttcactcggctgggagcctctgatcgtatcatggctggagagagtaccttctttgtggag ctaagtgagactgccagcatcctgcaccatgccactaaacactcgctcgtgctcctggat gaattaggaaggggcacggccacatatgatggcacagcgatcgccagtgctgtcgtgaag gagctcgctgagaagatctgctgtcgtacgctcttctccacacattaccactccctggtg gaggactatgccaacaaccctgctgttaggttgggccacatggcgtgcatggtggagaac gaatgcgaggatccgagtcaagagaccatcacattcctctacaagttcatcactggcgct tgtccgaagagttacgggttcaacgcggctcgactcgccagcctgcctgaggaggtcatc caatcaggacacaggaaggccaaagagtttgagaagagcaccatcagcctcagactcttc aagaagctctgccagtttgctgaagatgctacactggacaacacacacttttcttcactt gttcagatgctcaacaccgtgtag

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