KEGG   Anoplopoma fimbria (sablefish): 129093019
Entry
129093019         CDS       T09102                                 
Symbol
per1b
Name
(RefSeq) LOW QUALITY PROTEIN: period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129093019 (per1b)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    129093019 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 129093019
NCBI-ProteinID: XP_054456858
LinkDB
Position
7:complement(19984149..20001060)
AA seq 1436 aa
MSYDDSKSMPSSSTRGRVARAEEKDNDQEAESEGLNSLKTSSGQPSANVTTQDQESGNGG
DSMGGSSPSVGSGSRGRRGPNSDDMDGLSSGNDSGERESEGGMERDNGSHGRQSVRSSHS
SSNGKDSGMMLENTESNKSSNSQSLSPPSSSLAYSLLSTSSEHDPPSTSGCSSNQSARVQ
TQKDLMKAIKELKLRLPTERNAKGHTSTLNALKYALQCVKQVRANKEYYHQWSVEECHGC
SLDLSAFTIEELDNITSEYTLKNTDTFSMGVSFLSGKIVYVSPQGSSLLRCKPDRLQGTM
FSELLAPQDVSTFYSGTAPCRLPNWASCIGSASPPVDCTQEKSMFCRISADQAQAGEMRY
YPFRLTPYQLTIRDSDDSEPQPCCLLIAERVHSGYEAPRIPADKRIFTTSHTPSCLFQEV
DERAVPLLGYLPQDLVGTPTLLIIHPEDRPIMVAIHEKIFQFAGQPFDYAPLRMCARNGE
YLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTTPHGCETRATTPDVVQLSEQI
HRLLVQPVHSGSSQGYSSLGSSGSRGSRRSHQQRLSASGASSSDSNGPAMGKVAVAVASH
KPMTFQQICKDVHMVKTNGQQVFIESRNRPMPRKNTSTGTTSIRAISSDPIRSLIADMAK
PPKALVPAPIIPKESPAGYSYQQINCLDSIIRYLDSCNIPNTVKRKRGSYTTSSTSDEDK
QEASNNTGGSVNLVSEPPPLPPLTMATKAESVASVTSQCSFSSTIVHVGDKKPPESDIIM
EEAPTAPTTTPTPATAAPPANTAIAFPPLPSPPPQTAQPERDSRRSGSVGGGGGRMGLTK
EVLSAHTQQEEQAFLDRFKDLSKLRVFDQAASSTLRCQTPAANPLSRGARCSRDYPAAGS
STSHRRGRGGKRLKHQESSDQHSSLGLSGSRLDPRTSAAPMPLNIPIGXPTNSSSWPSVG
SQASIPAAPFAPGMLPIYPVYPPIAQPISVQDPSRFPPTQLVPPMMALVLPNYMFPQMGA
AISQPGPVPVPVPVPGHFFNPNFPYPAAAQGAIPTVISNPLPIPTTCAPSRSSTPQSYTQ
TQSYTQTQSYTQTPADREGAESPLFQSRCSSPLNLLQLEESPINRLEVATALVATQQATP
SVQGNAAGGQSSANQRSSDDTSKENENGEANESNNDAMSTSSDLLDMLLQEDARSGTGSA
ASGSGSSGTRSSGSGSGSNGCSSFGTSGMSSSQGSHTSKYFGSIDSSENDHLRKQPAGGS
SSAGGDGGEEQFIKCVLQDPIWLLMANTDEKVMMTYQLPVRDMETVLREDREALRSMQKH
QPRFSEDQKRELSQVHPWIRTGRLPRAINISGCTGCKSPPSVPPAAPFDVEIHEMELCSV
LKAPEESARERKTNLTETAMDEAHPEEEEDEEEKDMTAEEQQVTSEDVKEKSDMTH
NT seq 4311 nt   +upstreamnt  +downstreamnt
atgagttatgacgactctaaatcaatgcccagcagcagcactcgggggcgagtggcaagg
gccgaggagaaagacaatgaccaggaagccgagtcagaagggttaaactctctgaaaacc
agcagcggtcagcccagtgccaatgttaccacccaggaccaggagagtggaaatggaggc
gactccatgggcggctcatctcccagtgtggggtcagggtccaggggccgaagggggccc
aactccgatgacatggacgggctctccagcgggaacgactctggggagagggaaagtgaa
ggcgggatggagagagacaacgggtcacatgggcgccagtccgtgcgcagctcccacagc
tcgtcaaatggcaaggactctggcatgatgctggaaaacacagagagcaacaagagctcc
aactcccagagtctctcacctcccagcagctccctggcctacagcctgctgtcgaccagc
tcggagcacgaccccccgtccacctctggctgcagcagcaaccagtcggcgagggtccag
acccagaaagatctgatgaaggccatcaaggagctgaagctccgcctgccaactgagcgc
aatgccaaaggccacaccagcactctgaacgcactcaaatacgcccttcagtgtgtcaaa
caagtccgagccaacaaggagtactatcatcagtggagcgtagaggagtgtcatggctgc
agcctggacctgtctgccttcacaattgaggagcttgacaacatcacttcagaatacact
ctcaaaaacactgacactttctccatgggcgtgtcattcttgtcaggaaagattgtgtac
gtatcaccccaaggctcgtccctgctccgctgtaagccagatcgtctccaaggaaccatg
ttttccgagcttctggccccgcaggacgtcagcactttctatagcggcacggcaccctgc
cgcctgccaaactgggcctcgtgcatcgggtctgcttcccctccagtcgactgcactcag
gagaaatccatgttctgccgaatcagtgccgaccaggcgcaggctggcgagatgcgctac
tacccctttcgcctcacgccctaccagctcaccatcagagactcggacgattctgagcca
cagccctgctgcttgctcatcgcagagagggtccactctggatacgaagctcctcgtatc
cctgcagacaagaggatcttcaccaccagtcacacccccagctgcctcttccaggaagtt
gatgagagggctgtaccattgttgggctacctgcctcaggacttggtgggaacccctacc
ctcctcatcatccaccctgaagacaggcccataatggtggctatacatgagaagatcttt
cagtttgctgggcagccgtttgactacgcacccttgaggatgtgcgcccgcaacggggaa
tatctgaccatcgacaccagctggtcttcttttgtcaatccctggagccggaaggtggcc
ttcatcgtagggcgccacaaagtcagaacgagccctctgaacgaagacgtgttcacgacg
ccgcatggctgcgagactcgggccaccacgcccgacgtcgtccagctgagcgagcagatc
caccggctcctggtgcagccggtgcacagcggcagctcccagggctacagctcactcggg
tccagtggctcccgaggctcccggcgttcacaccaacagcgcctcagtgcctcaggcgca
tcttccagcgacagcaacggtcccgccatgggcaaagtcgctgtcgcagtcgcttcacac
aaacctatgactttccagcagatctgtaaagatgtccacatggtcaagactaatggacag
caggtttttatcgagtcccgtaaccgtccgatgcccagaaaaaacacaagcacaggcaca
acaagcatcagagcaatcagcagtgacccaatcagaagtttgatagctgacatggcgaaa
ccacccaaagctttggtccctgctccgattataccaaaggagtcccctgctggctactcc
taccagcagatcaactgtctggacagcatcataaggtacttggacagctgtaacattccc
aacactgttaaaaggaagcgtggctcctacaccacctcctccacgtccgatgaggacaaa
caggaggccagcaacaacacaggtggttcagttaaccttgtaagtgaaccacctcctctg
cctcccctgaccatggccacaaaggcagagagtgtagcctcagtcacgtcgcagtgtagc
ttcagcagcaccatcgtgcatgtgggagacaagaagcctcctgagtcagacatcatcatg
gaggaggctcctactgctcctacaaccacaccaactcctgccacagcagcacctcccgct
aacacggcaatcgccttccctcctctaccttcccctcctcctcaaaccgctcagccggag
agggacagccggagaagtggaagtgtgggaggtggaggtggccgcatgggtctcacaaag
gaggtgctgtccgcccacacccagcaggaggagcaggcattccttgaccgctttaaggac
ctcagcaagctgcgtgttttcgatcaggcggcgtcttcgaccctgcgctgtcagacccca
gctgccaaccccctgtcacgaggagcgcgttgttctcgggattaccccgccgcgggaagc
agcaccagtcacagacgtggtcgtggcggtaagagactcaagcaccaggagtcatctgac
cagcacagctctctggggctgagcgggagccggctcgaccccaggaccagcgcagccccc
atgcccctgaacatccccatcgganccccgacaaactcgtcctcttggccgtctgtaggc
tctcaggccagcattcccgccgccccattcgctcctggaatgcttccaatctacccagtt
tacccaccgatcgcccagcccatatctgtccaagatccatcgcgtttcccccctacgcag
ctggtacctcccatgatggccctcgttcttcccaactacatgttcccccagatgggagcg
gccatctctcagccaggccccgtcccagtcccagtcccagtccccggacacttcttcaat
cccaacttcccataccccgccgcagcccaaggagccatccccactgttatttcaaacccc
ttaccgattccgaccacctgcgcaccgtctcgcagcagcaccccgcagtcctacacccag
acacagtcctacacccagacacagtcctacacccagacgcctgctgaccgtgagggagca
gagtcccccctcttccagtccagatgctcctcacctcttaaccttctgcagctggaggaa
tcaccaatcaaccgcttagaggtcgccacagccctggtagcaacacagcaagccacgcct
tctgtgcagggcaatgcagccggcggacaaagctcagccaatcagaggagctctgatgat
acctccaaggagaacgagaacggtgaagctaatgagtccaacaacgatgccatgtccacc
tccagcgacctgctggatatgttgctacaggaagacgcccgctcaggcaccggctcagcc
gcctccggttcagggtcgtcagggacgaggtcctctggttcaggctccggctcaaacggc
tgcagctcctttggcaccagcggcatgagcagcagccagggcagccacaccagcaagtac
tttggtagtatcgactcatcggagaacgatcatctccgcaaacagccagcagggggcagc
agtagtgctggaggagatggtggtgaggagcagttcatcaagtgtgtcctgcaggacccc
atctggcttctgatggccaacacggacgaaaaggtcatgatgacctatcagctgcccgtc
agagacatggagactgtgctgcgagaagaccgcgaggccttgaggagcatgcagaaacac
cagccacgcttcagcgaggaccagaagagggagctgagccaggttcacccctggatccgc
acaggtcgcctgccccgagccatcaacatctctggctgtactggctgcaagtctccgccc
tccgtgcctcccgctgctccgttcgatgtggagatccacgagatggagctgtgcagtgtg
ctgaaagctccagaggagagcgccagagagcgcaagacaaatctgacagagacggccatg
gatgaagctcacccagaggaggaagaagatgaagaagagaaggacatgacagcggaggag
cagcaagtgacctcagaggatgtgaaagaaaagtctgacatgactcattga

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