KEGG   Anoplopoma fimbria (sablefish): 129093021
Entry
129093021         CDS       T09102                                 
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04141  Protein processing in endoplasmic reticulum
afb04210  Apoptosis
afb04217  Necroptosis
afb04218  Cellular senescence
afb04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129093021 (capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    129093021 (capn1)
   04217 Necroptosis
    129093021 (capn1)
   04218 Cellular senescence
    129093021 (capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    129093021 (capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:afb01002]
    129093021 (capn1)
Enzymes [BR:afb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     129093021 (capn1)
Peptidases and inhibitors [BR:afb01002]
 Cysteine peptidases
  Family C2: calpain family
   129093021 (capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 EF-hand_5 CAPN13-like_C_EFh Sclerostin
Other DBs
NCBI-GeneID: 129093021
NCBI-ProteinID: XP_054456859
LinkDB
Position
7:complement(5734274..5762385)
AA seq 705 aa
MEEPIYATGMAAKLRSQWDRNDGLGQNHKAVKFLGQDYESLKAQSLQGRRLFEDNLFPCA
ASSLGFNELGPRSSKTSGVRWMRPTEFCKRPEFIVDGATRTDICQGALGDCWLLAAIASL
TLNENLLHRVVPHGQGFQQGYAGIFHFQFWQFGEWVEVVIDDRLPVKDGKLLFVHSAEGT
EFWSALLEKAYAKLSGCYEALSGGSTCEGFEDFTGGVTEMFELKKAPADLYSIISRAIER
GSLLGCSIDITSTKDQEAVTFKKLVKGHAYSVTAVDEVVYRGNMTKLVRIRNPWGEVEWT
GAWSDNSREWDSVDRSVRARLQNRSEDGEFWMSFSDFLREFSRLELCNLTADALQNSQMK
KWSSSLYQGEWRRGSTAGGCRNFPATFWLNPQFKLVLQHPDTPGQSDCSFLVGLMQKDRR
RKRHEGKDMETIGFALYEVPKEFAGKSGVHLKRDFFLTHGSSARSELFINLREVSSRLQL
PAGEYIIVPSTFEPHKEADFVLRVFSEKPANSEELDDDVTAELPTEVELDESQIDPAFKN
LFRQLAGPDMEISLTELQTILNRIISKHKDLKTDGFTKEACRSMISLMDTDGSGKLGLTE
FHVLWEKVKRYLTIFRQFDLDKSGTMSSYEMRMALESAGFKLTNQLFQLIILRYTEADMS
VDFDNFVTCLVRLETMFKTFKTMDTDNDGFMSLNFHQWITLTMFA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggaggagcccatttatgcaaccggcatggccgccaagctgaggagccagtgggatcga
aatgatggtctgggacagaatcacaaggcggtgaagtttctgggtcaggactacgagagt
ctgaaggcccagagcctccagggtcggaggctgttcgaggataatctgttcccttgcgcc
gcgtcgtctctgggattcaacgagctcggcccgagatcttccaagacctccggagtccgc
tggatgaggcccacggagttttgcaagcgccccgagttcatcgtagacggagctactcgc
acagacatctgccagggagctctgggcgactgctggctgctggcagcaattgcctcattg
accttaaacgagaacctcctccaccgagtggttcctcacggacagggctttcagcagggc
tacgctggcatctttcacttccagttctggcagtttggcgagtgggtggaggtggtgatc
gatgaccggctgccggtgaaggatgggaagctgctgtttgtccactcggcggaggggacc
gagttctggagcgctctgctggaaaaggcctacgcaaagttgagcggctgctatgaggcc
ctgtcaggcggcagcacctgcgagggcttcgaggactttacgggcggcgtgacggagatg
ttcgagctgaagaaagcccccgccgacctctacagcatcatcagcagggccatagagaga
ggatcgctgctgggctgctccatagacatcaccagcaccaaggaccaggaggccgtcacg
ttcaagaagctggtgaagggacacgcctactctgtgaccgccgtggacgaggtggtgtac
agagggaatatgaccaagctggtccgcatcaggaacccgtggggggaagtggagtggacc
ggagcctggagcgacaactccagagagtgggacagtgtggatcgctcagtcagagctcgg
ctacaaaaccgcagcgaggacggtgaattctggatgtcgttcagcgacttcctgcgtgag
ttctctcgcctggagctctgcaacctgacggccgacgccctgcagaacagccagatgaag
aagtggagctcctcgctgtatcagggcgagtggaggaggggcagcaccgccggaggatgc
aggaacttcccagcaaccttttggctgaaccctcagttcaagctggttctgcagcacccg
gacactcccggccaatcagactgcagcttcctggtcggcctgatgcagaaggaccgcagg
aggaaacggcatgagggcaaagacatggagaccatcgggttcgccctctatgaggttcca
aaggagtttgcgggcaaatcgggcgtccacctgaagcgagactttttcctcacccacggc
tccagcgctcgctcggagctcttcatcaacctgagggaggtcagctcgcggctgcagctg
ccggccggggaatacatcatcgtgccctccaccttcgagccgcacaaagaggccgacttt
gtcctcagagttttctccgagaagcccgccaactcagaggagctcgacgatgacgtcaca
gcagagcttccaacagaggtcgagctggacgagagccagatcgaccccgccttcaagaat
ctcttcagacagctggccgggccggacatggagatcagcctcacagagctgcaaaccata
ttgaacaggatcatcagcaaacataaagacctgaagaccgacggcttcacaaaggaagct
tgccgcagtatgataagcctcatggacacggacggcagcggaaagttgggcctgacggag
ttccacgtcctctgggaaaaggttaaacgctacctgaccatattcagacagtttgacttg
gacaaatcaggcaccatgagctcctacgagatgaggatggctcttgaatctgcaggtttc
aagctgaccaaccagctgttccagctgatcatcctgcgctacacggaggccgacatgtct
gtcgacttcgacaactttgtcacctgtctggtccgactggagaccatgttcaaaaccttt
aagaccatggacacggataacgatggtttcatgtccctcaacttccatcagtggatcact
ctgaccatgtttgcctag

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