Anoplopoma fimbria (sablefish): 129093040
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Entry
129093040 CDS
T09102
Symbol
pcxb
Name
(RefSeq) pyruvate carboxylase, mitochondrial isoform X1
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00020
Citrate cycle (TCA cycle)
afb00620
Pyruvate metabolism
afb01100
Metabolic pathways
afb01200
Carbon metabolism
afb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
129093040 (pcxb)
00620 Pyruvate metabolism
129093040 (pcxb)
Enzymes [BR:
afb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
129093040 (pcxb)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Biotin_lipoyl_2
Dala_Dala_lig_C
ATP-grasp_3
RimK
NQRA_N
RnfC_N
ATPgrasp_ST
GCV_H
Motif
Other DBs
NCBI-GeneID:
129093040
NCBI-ProteinID:
XP_054456884
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All DBs
Position
7:15711521..15981378
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AA seq
1180 aa
AA seq
DB search
MMLRYTVVRGGLGLLAVRRACLSPRFSHSAPRSEYRPIKKVMVANRGEIAIRVFRACTEL
GIRTVAVYSEQDIGQMHRQKADEAYLIGKGLPPVAAYLDIPNIIQVAKDNNVDAIHPGYG
FLSERADFAQACSDAGVRFIGPSPETVRKMGDKVEARSLAISAGVPVVPGTNAPISCLQD
AQVFAETYGFPIIFKAAYGGGGRGMRVVKEYEELEENYQRAYSEALTAFGNGSLFVEKFI
EKPRHIEVQILGDKYGNVIHLYERDCSIQRRHQKVVEIAPAFQLDPHLRNRLHADAVNLA
KQVGYENAGTVEFLVDRHNKHYFIEVNSRLQVEHTVTEEITDVDLVHAQLHVCEGRSLPE
LGLKQDKIRVNGCAIQCRVTTEDPARGFQPDTGRIEVFRSGEGMGIRLDSASAFQGAVIS
PHYDSLLVKVIASGKDLQTAASKMSRALAEFRVRGVKTNIPFLQNVFNNHQFLHSTVDTQ
FIDENQELFNLKPTQNRAQKLLHYLGHVMVNGPTTPIPVKAKPSSIDPVIPPGTMGDPPI
GFRDVLLRDGPEGFAKAVRAHQGLLLMDTTFRDAHQSLLATRVRTHDLKKISPFVSHNFS
NLFSLENWGGATFDVAMRFLSECPWKRLQELRALVPNVPFQMLLRGANAVGYTNYPDNAV
FKFCEVAKENGMDIFRVFDSLNYLPNMLLGMEAAGAAGGVVEAAISYTGDVSDPMRQKYS
LDYYMNLADELVKAGTHILCIKDMAGLLKPQSSKLLIGSLRDRFPDVPIHVHTHDTAGAG
VAAMLACAEAGADVVDVAVDSMAGMTSQPSMGAMVACTKGTKLDTGIALEKVFDYSEYWE
VARGLYAPFDCTATMKSGNADVYENEIPGGQYTNLHFQAHSMGLGNKFKEVKKAYTEANK
LLGDLIKVTPSSKIVGDLAQFMVQNNLTRAEVEERADELSFPLSVVEFLQGYIGIPHGGF
PEPFRSKVLKSLSRIEGRPGASLPPMDFKALEEGLRSAHGDEITPEDVMSAAMYPKVFQE
FKDFTANFGPVDCLSTRLFLDGPKIAEEFEVELERGKILHIKALALGDLNKAGQREVFFE
LNGQLRSVLVKDTVAMKEMKFHPKAQKSIKGQVGAPMPGKVLEVKVEVGSKVEKGQPLCV
LSAMKMETVVNSPVAGTIKAVHVTADSSLEGDDLILEIEE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgaggtacacggtagtccgaggtggcctcggcctcctggctgtgaggagggcg
tgtctctccccccgcttcagccactctgccccgcggagcgagtatcgaccaatcaagaaa
gtcatggtggccaatagaggtgaaatcgccatccgtgtgttcagagcctgcactgaactg
gggattcgaaccgtggctgtctactccgagcaagacatcggacaaatgcacaggcagaag
gcggacgaggcttacctgattggaaaaggtctgccacctgttgcggcatacctggacatt
cccaacatcatccaagtagccaaggacaacaatgtggacgccatccacccaggctacggt
ttcctctctgagcgggcagactttgcccaggcctgctcggacgcgggggtgaggtttatt
ggaccaagcccagaaacggtgcgcaagatgggagacaaggtggaggctcggtccctggcc
atcagtgcaggtgtacctgtggttcctggaacaaatgcccccatctcctgcctgcaggat
gcgcaggtgttcgccgaaacatacggcttccccatcatctttaaagcagcctacggagga
ggcggtcgtggcatgagggtggtcaaagagtacgaggaacttgaggagaattaccagcgg
gcctactctgaagccctgacggcttttgggaatggatccctgtttgttgagaagtttatt
gagaagccaagacacattgaagtacagatcctcggcgataaatacggtaatgtcatccac
ctctacgagagagactgctccattcagcgcaggcatcaaaaggtggtggagattgcaccg
gctttccaactggaccctcatctgagaaatcgacttcacgctgatgctgtcaacctagcc
aaacaggttggctacgagaacgcggggaccgtggagttcctggttgacagacacaacaaa
cactacttcattgaggtcaactctcgactccaggtggagcacacggtgaccgaagaaatc
actgatgtggacctggtccatgcccagctgcatgtgtgtgagggccgcagcctgccagaa
ctgggcctcaagcaagacaagatcagggtgaacggctgcgcgatccagtgcagagtgacg
accgaagatccggccagaggcttccaaccagacacaggaaggattgaggtcttccgaagc
ggcgagggcatgggcatccgtctggacagtgcctcggccttccagggtgccgtcatctcg
ccccactatgactccctgttggtgaaagtcatcgccagtgggaaggacctgcagacggca
gcttccaagatgagtcgagccctggccgagttcagagtgcgaggggtcaagaccaacatc
ccgttcctccagaatgttttcaacaaccaccagttcctccactccaccgtggacacccag
ttcatcgacgagaaccaggaactcttcaacctcaaacccacccagaaccgagcccagaag
ctactgcactaccttggtcatgtgatggtaaatggaccaaccacacccatccccgtcaag
gccaagccctcctccatagaccctgtcatccctcctggcaccatgggcgaccctccaata
ggtttccgggatgtgttgctgcgtgacggtcctgagggatttgccaaggccgtccgtgcc
caccaaggcctgttgctaatggataccaccttcagggatgcccaccaatcgctcctggca
actagggttcggacccacgacctgaagaagatctcgccgttcgtcagtcacaacttcagc
aaccttttcagcctggagaactggggaggtgctacctttgatgtggccatgcgtttcctg
tcagaatgtccatggaagagacttcaggagctgagagctttggtaccaaatgttcctttc
cagatgctgctgcgaggggccaacgctgtgggctacaccaactaccctgacaacgctgtc
tttaagttctgcgaggtggccaaggagaacggcatggacatcttccgcgtgttcgattcc
ctgaactacctgccgaacatgctgctgggcatggaggctgctggagcagcaggtggcgtg
gtggaggctgccatctcgtacacaggcgacgtctctgacccaatgaggcagaagtactct
ctggactactacatgaacctggcagacgagcttgtcaaagccggaacccacatcctctgt
atcaaggatatggccggtcttctgaagccacagtccagcaagctactgattggctctctg
agggaccgtttcccagatgtgcccatccatgttcacacccacgacacagctggcgctggt
gtagccgccatgttggcctgtgctgaggctggagctgacgtagtggatgtggcggtcgac
tctatggccgggatgacctctcagcccagcatgggagccatggtggcctgcaccaagggg
accaagcttgacaccggcattgctctggagaaggtatttgactacagtgaatattgggaa
gtagccagaggcctgtacgctccattcgactgcactgccaccatgaaatctggcaacgct
gatgtctatgagaacgagatacccggaggacagtacaccaaccttcacttccaggctcac
agcatgggactcggaaacaagttcaaagaggtgaagaaggcctatacggaagccaacaaa
ctactaggggacctcattaaggtgacaccatcctcaaagattgtgggtgacttggcccag
ttcatggtgcagaacaacctgaccagggcagaagtggaggaacgggcggatgagttgtcc
ttccccctgtctgtggtcgagttcctgcagggatacattgggataccacatggaggattc
ccagagccgttcagatctaaggtgctgaagtccctctctcgtatcgagggtcgtcccggc
gcttctctgccacccatggacttcaaagccctggaagaggggctccgatctgcacacggt
gatgagatcacccctgaggatgtgatgtcagcagccatgtacccgaaggtgttccaggag
ttcaaggacttcactgctaactttggtccggtggactgtctcagcaccaggctgttccta
gatggacccaagatcgccgaggagtttgaggtggagctggagagggggaagatcctccac
atcaaggcgctggcactgggtgacctgaacaaggcaggccagagagaggtgttctttgag
ctgaatgggcagctgagatcggtcctggttaaagacaccgtcgccatgaaggaaatgaag
ttccatcctaaggctcagaagtctatcaagggtcaggtgggagcacccatgcctggaaaa
gtcctggaggtcaaagtggaagtgggatccaaggtggagaagggccagccgctgtgtgtc
ctttcggccatgaagatggagacggtggtcaactccccggtggccggtaccattaaggct
gttcatgtcacggctgactcctccctggagggagatgacctgatactggaaatcgaggag
tag
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