Anoplopoma fimbria (sablefish): 129093051
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Entry
129093051 CDS
T09102
Symbol
jmjd1cb
Name
(RefSeq) LOW QUALITY PROTEIN: probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129093051 (jmjd1cb)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129093051 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
129093051
NCBI-ProteinID:
XP_054456901
LinkDB
All DBs
Position
7:complement(8477447..8578511)
Genome browser
AA seq
2930 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPPEIGDTGRWPWRSGVIRAVNHRDSGNPDLTVYVEFDDQ
EWEKREWVKIYEDFQLFLLEHQLVWAKRKEGAGGGLLQGTKAKHIQWPALAFKPVVGKSL
LSSVTAVEFFLDRQLDFLSDHSAFQPYQDEVDSPNPVLRDNHQLHEEVRGWLKDQKVQEI
FMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPSMIQMT
FLDDVVHSLLKGENIGITSRRRSRSSQNNNSTHMTGGRPGGTTGSTQSHYTRAQANSPRP
IMTSSGPNPKGSQGTLASQQQSQSQQSQQPASQSHHSPGGSGREQREQRNARSSRRKGSD
SSVPEEDKDRREETTARDSKSKAKQAVNKRRKGEEDEKKAGLKRLKTDMTSDLSESSDSE
NPHNKRTAHSSCSSSSSSSSSSSSSSSSSSSEPNSENELKSRGTDVKQSGVSKKEEEEEE
EQPPMQATKMNDSSSLIGRLSPWAELQEAEDSNKGVVKETGKMSTKEEEELVAVTQITQS
PRQQMPQISDTVQASSTESSKSTVKASPRSQTPSLSHPGGGSGGSVIDITDEAQATVHQE
SSEAVSALLASQKAESTALSPYLPLNPSPVSSPPVPPSPSPSEGGRRTDIDPPMQQQQGI
MGAGMTAARSLSNKIEFAPSEVIRPITSMVENVVLVEKEKTVLPHHLHHHHHHQQQQQQQ
QQQHAQQQQQHYTSIHPSIKSPSLSEETRKHPPLQALPHKMNTXPPDLARSRMSPNPAQL
DALKQKPQHPNNSQSHPYPNTNPADLLKAKPHPGLLDISKPKPNTSPEVSKHKIQRYSDT
SPPPIGRLSAKVEMAEPPRSGFKPVPARSESGGVSMSSSTKSPLIIDKNETFTVYRDPAL
VRSDAENSVSVSVSSNHVAAYLHPHLHTLHSPSPHSPCLTSVSHSHLLAPPHTSALPHPH
LLPPGVLPAMPPPTASLLGGHPRLDSPSGLGHLALPHPSVAHQQQFLQGQGPPPPSLLAQ
AHGGAAGLGLYPILWQYPNGTPTSYPPGLNLPPTAKWVHPENTVSLNSDASLRRNTASPW
LHQVAGSAGDGLGLLSHVPVRPASADPHRPPVKINAHASPPLSKAGMNAHKEDVDKKGFM
DPIRTLTLAQLKQEQTDRTRTPTGKDVHLHRLYLDPHSKARLANTQDAVQAADRASKYKE
ENRQILKESIEVAPFTAKIQRSGDPGMDRDRERCRDQAFPVRLAALTSPSPKASHIHPHV
IQSEKSNYFTTLSNSVVNEPPRLYPSKELSSYYDKVSGGAPGVVASVGAAVPSQGALSLG
SYSSKSSLSKPPPLIKHHPEGGEGLAGKITEQLSQQVPLVQQQHQHHTGGMDRIERRSPA
ISPTSSTLSSTVPNHHHHHHHHHQQQHHHQHQQQQQQQQQQQQQHHQLRAMPSLHRAPVF
NPPTQHALDRKEAAEREMEREREREREREREREREKERERERERAGYGGRLSPPTLTPIQ
PVSLAAAGSKTSAEQQKPPTLLPEGLGSAAAITSVASAISGEIMTSSVDAWRHGEMIQER
GGMSRGKPHSAMASVIVRPSSSLKYDSLVGANKSGAMISKELPQGRFYPAKLQGEGLRLG
ESVREAVAGRVIIPNSNLDDMCVLYKHTSMRGMQGTMAPGITNSVCRTAISAASAFGIQS
VSGTAIPELGYSVSAHKTGICGRVLSHSGPGEYQEGLGSRTTSPGGSLPPPSPAGTPQPS
PCLTPTPSCISGSSQPYSSSFVHLKKHKAALAAAQSRSNFSTAPTSVATGNCFLPVDSVD
KTPIRNSPHPPSSSQASSSLVDSSISSSSGSTTTGKSSPLPNGQTSGSASTSSGQPSNCH
KLKKAWLTRHSEEDRNTTATTSSTSIKPEKPPSTSTISTITTITTTATSTSTSNTAAMSE
MIKPCTVNLSASTSSEVELSKDSKAERERQLEEKLGGAATGGGGGEERKAAPLSRRGNKR
SYESASESGGDDSDASESRMEGRAKRQPKPTYKKKQNDMARRKGDNEKDEDDLKPNGIFR
SAREKTKLKLASSNGIPRSVLKDWRKVKKLKQTGESFLQDDSCAEIGPNLQKCRECRVVR
SKKGEEPTHSPVFCRFYYFRRLSYSKNGVLRMDGFSNPDQFDDEALSLWVPGLMEESHLD
QTTAKYILSFIGDKFCQMVVTENTAATWVKKDAKLAWKRAVRGVREMCDACEATLFNIHW
VCQKCGFVVCLDCYKAKERRSSKDKELYGWLKCVKGQPHDHKHLMPTQIIPGTVLSELVA
SMHTLREKHNIKPHCPCTNKQNLLTKLPATNGVSQVLQNVLNHSNKLSLVKAEQGSQQNS
DQGGTKVETNGGGGGGSSPGSDAGSAPVTPPESQSPLHFLADLAEQKSREEKKENKLVLL
GKSVKEDKVGDSLEVLQQCKTTSLVANSTEQGSTLRDLLTTTAGKLKLGSTDAGIAFAPV
YSTASQTGKGGRTMPNILDDIIASVVENKIPASRQSITSKLSIKHEPVTPVNNNTPAPAI
AEDAKPDRKKLVHVTAAVPEESTNQYPDIPHCWLNNRRLLWLKDHRNQNNWKLFRECWRQ
GQPVLVSGIHKRLNGGLWKAESFNQEFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKR
PKSKDGEPMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFV
RPDLGPRLCCAYGVAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLE
EEDLDEGVRRRLKDSSETPGALWHIYLNKDMDKVREFLHKEQGSDVTADQDPIREQGSYL
SRKQRQRLLDEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDFVSPEHVANSF
HLTQELRPSKEEVNYEDKLQVKNILYHCVKEAVSALKRSGSEEDNEEENS
NT seq
8793 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcgggaaacggttcctctgtgtcagcggcgac
gagccgccagaaatcggcgacaccggccggtggccgtggaggtccggcgtcatacgagcc
gttaaccaccgtgacagcggaaaccccgacctgacggtttatgtagagtttgacgaccag
gagtgggagaagagagagtgggtgaagatctatgaggatttccagctgtttctactggag
caccagctggtctgggccaagaggaaggagggcgcaggaggaggactgctgcagggaacc
aaggccaaacacatacagtggcctgccctggcgtttaagccagtggtggggaagagcctg
ttgtcatcggtaacagcagtggaattcttcttagaccgacagctggacttcctgtccgac
cattcagccttccaaccgtaccaggatgaggtggacagtccgaacccagtgttaagagac
aaccatcagctccatgaagaagtgaggggctggctcaaagaccagaaggtgcaggaaatt
tttatgcaaggtccctattcattgaatggctaccgcgtgcgtgtctacagacaagactcg
gccacccagtggttcactggcatcatcacacaccacgacctcttcagtcgaaacatggtc
gttatgaatgaccaggtgctagaacctcagaacgttgatccgtctatgatccagatgacc
tttctggacgacgtggtccactccctgctaaaaggagaaaacatcggcatcacttccaga
cggaggtcacgatccagccagaacaacaactctacccatatgacaggagggagacccgga
gggaccactggaagcactcagagtcattacacacgagcccaagccaacagcccccgcccc
atcatgacctcatcaggccccaacccaaagggttcccaggggacgctggcctctcagcag
cagagccaatcccaacagagccagcagccggccagccaatcacaccactcgcccggcggc
agtgggagggagcagagagagcagcgcaacgctcgctcctccaggaggaaaggatcggat
agcagcgttccagaggaggacaaggaccggagagaagagaccacagcgagagactccaag
tcaaaggccaagcaggcggtgaacaaacgcaggaagggcgaggaggatgagaagaaggca
ggtctaaagaggctgaagactgacatgacctctgacctgtcggagagcagcgactcagaa
aacccccacaacaagaggaccgcccactcctcatgctcctcttcctcctcatcgtcctca
tcgtcgtcctcctcctcctcttcctcctcttctgagcccaactctgagaatgagctaaag
tctcgcggcactgatgtgaaacaaagcggcgtctccaaaaaggaggaggaggaggaggag
gagcagccaccgatgcaggccaccaagatgaacgactcctcatctctcattggtcgcctg
tccccttgggcggagcttcaggaagcagaggacagcaacaagggcgtggtcaaggaaaca
ggcaaaatgtcaaccaaggaggaagaggaattggtggctgtgacgcagatcacccagtct
ccacggcaacagatgcctcagatatctgacacggtccaggccagcagtactgagagcagc
aagagcactgtgaaagcgtctcctcgatcccagacgccatcgttgtcccatcctggcggc
ggcagcggcggcagtgtgatcgacatcacagatgaggcccaggccacggtgcaccaggag
agctcagaggctgtgtcggctctgctcgcctcgcagaaggccgagtccacggccctctcc
ccttacctccccctcaacccctctcccgtctcgtcgccgcccgtccctccgtctccctcg
ccatcggaaggaggccgcaggacggatatcgatcctcccatgcagcagcagcagggcatt
atgggtgctggcatgacagcagccaggagcttaagcaacaagattgagtttgctccctct
gaggtcatcaggcccatcacatcgatggttgaaaatgtggtgctggtggagaaggagaag
actgtccttcctcatcatcttcatcatcatcatcatcatcaacaacaacaacaacaacaa
cagcagcagcacgcacaacaacaacagcaacactacacatccatccaccccagcattaag
agcccgtctctgtccgaggagacgagaaaacacccaccgctgcaagcactcccccacaag
atgaacactnncccccctgacctagccagatccagaatgagccccaacccagctcagctc
gatgccctgaaacagaaaccccagcaccccaacaactctcagagccacccctaccccaac
acaaaccccgccgaccttctcaaggccaagccccacccgggcctgctggacatctccaaa
cccaaaccgaacacctccccagaggtctctaagcataaaatacagaggtactccgacacc
tccccacctcccataggccgcttgtcggccaaagtagaaatggcagaacccccacggtcc
ggtttcaagccggtaccggcgcggtcagagtcgggcggagtcagtatgagcagcagcacc
aagagccctctgatcattgataagaacgagaccttcaccgtctacagggacccggcgctg
gtccgctccgacgctgagaactctgtctctgtctccgtgtcctccaaccacgtggcagcc
tatctccatccccacctgcacacccttcactccccctccccccactccccctgcctcact
tccgtgtctcactcccacctcctcgcacctcctcacacctctgccctacctcacccgcac
ctgctaccccccggggtgctcccagctatgcctcctcccacagcgtccctcctcgggggc
caccctcgtcttgactcccccagcgggctgggccacctcgccctgcctcacccgtcagta
gcacaccagcagcagttcctacagggtcagggcccccctccaccctctctactcgcccaa
gctcacggcggggcagcagggctgggcctttaccccatcctctggcagtacccaaacgga
acaccgacctcctaccccccgggactcaacctgccccccacggccaagtgggtccaccct
gaaaacaccgtcagcttgaattccgatgcctcactcaggaggaacacagccagtccttgg
ctgcaccaggtagctggtagcgctggtgatggtcttggtttgctgagccacgttcctgtt
cggccggcaagcgccgacccccaccggccccctgtcaagatcaatgcacacgcgagccct
ccgctgtcaaaggccggcatgaacgctcataaagaagatgtggataagaaaggctttatg
gacccgatcaggacgttgacactggcccagctgaagcaggagcagacggaccggactcga
actcccacagggaaagacgtccacctccaccgcctctacctagacccccacagcaaggct
cgcctggcaaatacacaggatgctgttcaggcagcagaccgggctagtaaatacaaagag
gagaatcggcaaatcctgaaagagagcattgaggtcgctcccttcaccgccaagatccag
cgctccggtgaccccgggatggaccgggacagagaacggtgcagagatcaagccttcccc
gtccggttagcggctctcacctccccgagccccaaggctagccacatccatccccacgtc
atccaatcagaaaagagcaactacttcaccacgctgtccaacagcgtagtaaatgagcct
cctagactctacccctctaaggagctcagctcttactacgacaaagtgtctggtggagct
ccaggggtggtggccagcgtcggggccgccgtgccaagccaaggagccctgtccctgggc
agctatagctcaaaatcctccctctccaagcccccacccctcattaagcaccacccggag
ggaggagagggcttagcggggaaaatcacggagcagctcagccagcaggtgcccctagtc
cagcagcaacatcagcaccacacgggtggtatggacaggatagaacgccgcagccccgcc
atttctcctacctcctctacattgtcctccacagtacccaaccaccatcatcatcaccac
caccaccaccaacaacaacatcaccatcaacatcaacagcagcagcaacagcagcaacag
cagcaacagcagcatcaccagctcagggcaatgccatctctccaccgagcgcctgtcttt
aacccgcccacacagcacgcactggatcgcaaggaagctgcagagcgagagatggagcgg
gagagggagcgggagagggagcgggagagggagagggagcgggagaaggagagggagcgc
gagagagagagagccggttacggcggacgcctgtccccgccgaccctcacgcccatccag
ccggtaagcttggcggcagccggtagcaaaacatcagcggagcagcagaagccccccacg
ctgctgccggaaggtcttgggagcgccgccgccatcacctccgtggcctcggccatcagt
ggggagatcatgacttcatccgtagacgcgtggagacacggagagatgattcaggagaga
gggggaatgtcgaggggaaagccccattccgccatggcatcggtcatcgtacgtccgtcg
tcatccctcaagtacgacagtcttgttggtgctaacaaatctggtgctatgatctctaag
gaactcccccaggggaggttctacccagccaagcttcagggggaaggtctgagactaggg
gagagtgtgagagaagctgtagccggcagggttatcatacccaactcaaacctggacgac
atgtgtgtcctgtataaacatacttctatgcgtggcatgcagggaactatggcacccggg
atcacaaactctgtgtgcaggactgccatttcagccgcatcagcttttggcatacagagt
gtcagtgggacagccatccccgagctgggctactcagtctcagcacataaaactggcatt
tgtggccgggtgctaagtcactcaggaccaggagagtaccaggaggggttaggctcccgc
actacatctccaggggggtccctgcctccccctagtccagcagggacaccccagcccagt
ccatgcctcaccccgacacccagctgcatttctggctccagtcagccttactcctcctcc
tttgtccacctcaagaagcacaaagctgccttggctgcagcccaatccagaagcaacttc
tccactgcgcccacatccgtagcaacaggaaactgcttcctacctgtggattcagtcgac
aaaactcccattcgcaactcgccccatcctccctcctccagccaagcctcgtcatctttg
gtggacagcagtatcagcagctccagtgggagcacaacaacagggaagtccagtcccctg
cccaacggtcagacctccggatcagcttcgacaagcagcggtcagcccagtaactgccac
aagctgaagaaagcctggttaacccggcactcagaggaggacaggaacacaactgctact
acaagctccaccagtattaaaccagagaaaccgcccagcaccagcaccatcagcaccatc
accaccatcaccaccaccgccaccagcaccagcacaagtaacaccgcggccatgtcagaa
atgatcaaaccctgcacagtcaatctcagtgcctccacctccagcgaggtggagctgagc
aaagacagcaaagcggagagagagcggcagctggaggagaagctgggaggagcagccaca
gggggaggaggaggggaggaaaggaaagcagctcccttatcaaggagagggaacaaacgg
tcatacgagtccgcttcagagagcgggggagacgactccgacgccagtgagagcaggatg
gagggccgagccaagcgccagcctaaacccacctacaagaagaaacagaatgacatggcc
aggaggaagggagacaatgaaaaggacgaggatgacttgaagcccaatggcatcttccga
tcagcccgagagaagacgaaactcaaactagccagcagcaatgggatcccccgctccgtc
ctgaaggactggaggaaggtgaagaagctgaagcagacgggggagtcgttcctgcaagac
gactcgtgtgccgaaatcgggcccaacctgcagaagtgtcgggagtgcagggtggtgcgc
agcaagaagggagaggagccgacgcactcccccgtcttctgtcgcttctactatttcaga
cggctgtcctacagtaaaaacggggtcctccggatggatggcttctccaatccggaccag
ttcgacgacgaagccctgtccctctgggtccccgggctgatggaggagagccatctcgac
caaaccacagccaagtacatcctcagcttcatcggagacaagttctgtcagatggttgtg
accgagaacactgcagccacctgggtcaagaaggatgccaagttggcgtggaagcgagct
gtgaggggggtgagggagatgtgcgacgcctgcgaggcgacactcttcaacatccactgg
gtctgtcagaagtgtggctttgttgtctgccttgactgctacaaggccaaggagagaagg
agctccaaagataaagaactctacggctggctgaaatgtgtgaaaggccaaccccacgac
cacaaacacctgatgcccacacagatcatacctggcacagtgctgtcagagttggtggct
tccatgcatactctgagagaaaaacacaacatcaaaccccactgtccctgcaccaacaag
cagaacctcctcaccaaactaccggccaccaacggagtctcacaggttctgcagaatgtc
ctgaaccacagtaacaaactgtctctggtgaaggctgagcaaggatctcagcagaactct
gaccaaggaggaaccaaggtggagaccaacgggggaggcggtgggggaagcagtccgggc
agcgatgcgggaagtgctcccgtcaccccgcctgagtcccagtcgcctctgcacttcctg
gctgacctggcagagcagaaatccagggaggagaagaaagaaaacaagttggtgctgctt
ggtaaatcagtgaaggaagacaaggtgggggacagcctggaggtcttgcagcagtgtaaa
accacctcgctggtggccaacagtacagagcagggctctacactccgagacctgctaacc
accaccgcagggaagctgaagctgggctctaccgacgcaggaattgccttcgcgccagtc
tactctactgcgtcacagactggaaaaggtgggaggaccatgcctaatatccttgatgac
atcattgcatctgtggttgagaacaaaatccctgccagccgccaaagtatcacctccaag
ctgtcaataaagcacgagcccgtcaccccggttaacaacaacacccctgcccctgctatc
gctgaggacgccaaaccagacaggaagaagttggtgcacgttactgcggcagtgccagag
gaatcgaccaatcagtatccagatattccccactgctggttaaacaacagacggttactg
tggctcaaagatcaccgcaaccagaacaactggaagctgttcagagagtgctggagacaa
ggacagcctgtgttggtttcggggatccataagcgactgaacggcggcctgtggaaagct
gaatccttcaaccaggagtttgcggaccatcagggagacctcctcaactgtaaagaccag
gtggtgtccaactccgggatcaaggagttctgggatggatttgaggacatcaccaagcgg
ccaaagtccaaggatggagaaccgatggtctacaggctgaaggactggccgtctggagag
gagttcatggccctcatgccctcaagatatgatgacttgatgaagaacctgcccctgcca
gagtactctgatccagagggaaacctcaacctggcctcccatctgccatctttctttgtc
cggccggatctggggccccgactgtgctgtgcctacggtgtagctgcatctcaggaccag
gacttcggaaccgccaacctccacgtggaagtctccgatgtcgtctccgttctggtctac
gtaggagtggccaaaggcaatggggtcctgtccaaaactggtgttctgaagcgtctggag
gaggaggatctcgacgagggggtccgaaggaggctcaaagactccagtgagacaccgggg
gctctgtggcacatctacctcaacaaagacatggacaaggtccgggagttcctgcacaag
gagcagggatcagacgtgacagcggaccaggacccgatcagagagcagggctcctacctg
agcaggaagcagcgtcagcggctgctggatgaacacggagtccagggctggactgtggtt
caattcctgggagactctgtgctcataccagcaggggccatgcaccaggtccagaacctc
cacagctgtgtccaggtcatcaacgactttgtgtctcccgagcacgtggccaactccttc
cacctgacccaggagctccgtcccagcaaagaggaggtcaactacgaggataaactacag
gtgaagaacattctgtaccactgtgtgaaggaggcggtgagcgccctgaagaggagcggc
tctgaggaagacaacgaggaggagaactcatga
DBGET
integrated database retrieval system
