Anoplopoma fimbria (sablefish): 129093062
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Entry
129093062 CDS
T09102
Symbol
nrxn2b
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 2b
KO
K07377
neurexin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129093062 (nrxn2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129093062 (nrxn2b)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
129093062 (nrxn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
129093062
NCBI-ProteinID:
XP_054456932
LinkDB
All DBs
Position
7:complement(12545641..13116486)
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AA seq
1686 aa
AA seq
DB search
MTRGLRFLCWPLWPLALFSLLTTVKMLEFGGAPGQWARYGRWEAGSVGELSFSLKTNISK
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPATLHMETRVNDDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLK
VGEMPPALLNSQGIQSDLEYLCTKQNPCFNGGLCSIQYGEVHCDCTHTRFKGKYCKEAEE
YAVEGLAHLTLNDQGMEGESSQVGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRT
LQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNTWHDVRVTR
NLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNF
MGCLKDVVYKNNDFKLELSRLAIERDPKITLNGDLVFRCEDVAALDPVTFETPESYISLP
KWNTKKTGSISFDFRTTEPSGLLLFSHGRPQGPKEQKPGRELKTDYFAMELLEGYLYLLI
DMGSGKTKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFSSPEGSEILDLDSDMY
LGGLPESKSDLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEMQSAFGVSSFCTR
ELQKRCSSAPCGNTGLCKEGWNRYICDCIGTGYLGGNCEIEATVLSYDGSMYLKIIMPVT
MHTEAEDVALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKG
PETLFAGQKLNDNEWHTVKVVRRGKNLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTER
RFISVVPSNFIGHLQGLTFNGLPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSY
LALATLQAYASMHLFFQFKTTTPDGLMLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLM
KGNSDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVTKNM
YSNLPKLIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEESCYHQ
GVCLQQWEGFTCDCTMTSYGGSFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVG
FSTQLKEAVLVRVESAKGLGDYLELHIERGKIGVIFNVGTDDIAIEESAVMVSDGKYHVV
RFTRSGGNATLQVDNQPVIERFPSGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTI
FNSQAFIKIGGGGEKGRHFQGQISGLYYNGLQVLKLAAEGDPNVQTQGNLRLVGDVPSVL
TTDTTSTTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNADDLLVASAECPSDDE
DLEECEPGNGGELVLPIITVDSLDPPSIATHYPVIPPPPTTYRPFLTLFETTKESLPLPN
GRPPCPLDQEDCEETIEVSAYGSGEMTESDDEDYYKNXPLVTDRTVLPPPPAVEGSVQNP
RDRHFSRAPNSHHPPLSSTPTANPDKLSPHIKPAGGGSSSSNNKIPAGKMNTRDQVLLPP
AHPSSDPGHRRVPGITYPPNFPHVPTPDPTSPERGLPGAVEVQQSSSTTGMVVGIVAAAA
LCILILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPSTAKTVTKNKKNK
DKEYYV
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggggttaagattcctgtgttggcccctgtggcctctggccctcttcagcctg
ctcactacagtgaagatgctggaatttggtggggcgcccggccagtgggcacgctacgga
cgctgggaagccggatcagtgggcgagctgagcttcagtctcaagaccaacatcagcaaa
gctttggtactctacctggatgatggcggcaactgtgacttcttggagcttctgatcgcc
ggtgggcgcctccagctgcgctttgccatccactgtgccgagccagccacgttgcacatg
gagacacgggtgaatgatgaccgatggcacatggtcttgctcacccgcaacttccgggag
accctcctgatggtggatggtgagacaaaagtggctgaggtcaaatccaaaaggaaggag
atggcagtggtcagtgacctgtttgtgggcgggatcccacctgatgtgcgcctctcagct
ctgacatctagcacagtgaagtacgagccacctttcctgggcttgatctccaatctgaag
gtgggggagatgcctcccgctttgttaaatagccaaggcattcagagcgacctggagtac
ctgtgcaccaaacagaacccgtgcttcaatggagggctttgctctattcagtatggagaa
gttcactgtgactgcacccacacccgcttcaaggggaagtactgcaaggaagctgaagag
tatgctgttgaaggtctggcgcacctgacgttaaacgaccaaggtatggaaggggaatca
tctcaagtcggtaaagaagagtcggtggccaccttcaagggcaacgagttcttctgctac
gacctgtcgctgacgcccatccagagcagcaccgacgagatcacgctttccttccgcacg
ctgcaacgcaacggcctcatgctgcacaccgggaaatcggcggactacgtgaacctttcc
ctgaagagcggcgcggtctggctggtcatcaacctgggctcgggggcgttcgaggcccta
gtggagccggtcaacggcaagttcaacgacaacacctggcatgacgtgcgcgtcacccgc
aacctgcgccagcacgcaggcattggacacgctatggtgaccatctcagtggatggtata
ttgaccaccactggttacacccaggaggattacaccatgttgggttcggatgacttcttc
tacatcggagggagccccaacacggcggacctgcccggatcaccagtcagcaacaacttc
atgggctgccttaaagatgtggtgtacaagaacaacgactttaagctggagctgtctcgg
ctggctatcgagcgcgaccctaagatcaccctgaatggggacctggtgttccgctgtgag
gacgtggcagccctggaccccgtcacctttgagacccccgagtcctacatctccctgccc
aagtggaacaccaagaagacgggatccatctccttcgacttccgtactacggagcccagt
gggctcctgctgttcagccacggccgtcctcagggtcccaaagagcagaagcccggtagg
gagctgaagacagattactttgccatggagctgctggaggggtatttgtacctgctgatc
gatatgggctctggaaaaacaaagctgaaggccagcaacaagaaggtcaatgatggggaa
tggtgccatgtggatttccagagggaagggaggaaaggatctatctcagtcaacagccgc
agcatgcccttcagctccccagagggcagtgaaatcctggacctggacagcgacatgtac
ctgggcgggctgcccgagtctaagtcggacctcatcctgccaccggaggtctggacggcg
ctgctcaactacggctacgtgggctgcgtccgcgacctcttcatcgacggcaagagccgc
gatgtccgccgcctggctgagatgcagagcgcgttcggcgtcagcagcttctgcacccgc
gagctgcagaagaggtgcagcagtgccccctgtggcaacacaggtctgtgcaaagagggc
tggaaccgctacatatgtgactgtatcggcaccggatacctgggaggcaactgtgagata
gaggcgacggtgctgagttatgacggcagcatgtacctgaagatcatcatgccggtcacc
atgcacacggaggccgaggacgtggcgctgcgcttcatgtcccagcgggcgtacggcctg
ctcatggccaccacctccaaggagtcggcggacaccctgcgactggagctggacggaggc
cgcgtcaagctcaccgtgaacctcgattgtatcaggatagactgtaacctcagcaaagga
cctgagacgctgttcgcggggcagaagctgaacgacaatgagtggcacacggtgaaggtg
gtgcgaagaggcaagaacctgcagctgtctgtggataacgtcacagtggaaggccagatg
actggtgcccacacacgtctcgagttccacaacatcgagacgggtataatgaccgagcgg
cgcttcatatctgtggtgccctcaaacttcattggccatctccaaggcctgaccttcaac
gggctgccctacctagaccagtgcaagaatggcgacatctcctactgcgaactgaatgcc
cgctttggcatgcgccacatcattgcagatccagtgacgtttcgaacgaaaggcagctac
ttagcgttggccactttgcaggcttacgcctccatgcacctcttctttcagtttaaaacc
accacgcctgatggcctgatgctcttcaactctggagacgggagtgacttcattgtcgtg
gaactggtgaaaggatacgtccactacgtctttgatcttggcaacgggccgtcgctgatg
aagggcaactcagacaagccactcaatgacaaccagtggcacaacgtggtggtgtcccgg
gacgcaaacaacgtgcatacactcaagatcgactcgcgcaccgttacgcagcactccaat
ggagcacgcaacctggacctcaaaggggagctgtacatcggtggcgtgacaaagaacatg
tacagcaatctgcccaagctgatagcatcccgggacgggtaccagggctgcctggcctcc
gtggacctgaacgggagactccctgacctgatcgcagatgcactccatagggtgggccag
gtggaacgaggctgcgatggacccagtaccacctgtacggaggagtcttgctaccatcag
ggagtgtgtctccagcagtgggagggcttcacctgcgactgcaccatgacgtcctatgga
ggttcattctgcaacgatcctgggacaacatacatcttcgggagaggcggagccctcatc
acatacacctggccacccaatgaccggccgagcacacgggcagaccggctggcagtgggc
ttcagcacgcagctgaaggaggcggttctggtcagggtggagagcgccaagggactggga
gactacctggagctgcacatagaacggggaaagatcggcgtgatcttcaacgtgggaaca
gatgacatcgccatcgaggagagcgcagtgatggtgagcgacggcaaataccacgtggtg
cgattcacgcggagtggtggcaacgccacactacaggtggacaaccagccagtcatcgaa
cgtttcccctcagggaactttgataatgagcgcctggctattgctagacaaagaatccca
taccgacttggtcgggtagttgacgagtggctactcgacaaaggtcgtcagttgaccatc
ttcaacagccaggcgttcatcaaaattggtggcggtggagagaagggtcgccactttcag
ggccagatctcaggcctgtactacaacggcctgcaggtgctcaaactggcggccgagggc
gaccccaacgtccagacccagggcaacctgcggctggtgggtgacgtgccctcggtgctc
actacagacaccacctccaccaccccgctggctgatatgtccaccacaatcatggagaca
accaccaccatggccacgaccaccacccgcaaacagcgctcgcccaccatgagggacagt
gtcacacagaatgcagatgacctcttggtagcatcagctgagtgtccaagcgatgacgaa
gatttggaggagtgtgagcctggaaatggaggtgaattagtgttgcccataataaccgtg
gactccctagaccccccgtcaatcgccacccactacccagtaatcccaccaccccccacc
acctaccgccccttcctcaccctgttcgaaaccaccaaagagtccctccccttgccaaac
ggccggcccccttgccccttggaccaggaggactgcgaggagaccatcgaggtgtcggcg
tacggctcgggggagatgaccgagtctgatgacgaggactattacaaaaacntccccctg
gtcaccgacaggactgtcctccctcctcccccagctgtcgagggcagtgtccagaacccc
cgagaccgccacttctcccgcgccccaaactcccaccacccacctctctcctccaccccc
acagccaaccccgacaagctcagcccccacattaagcccgccggcggcggcagcagcagt
agcaacaacaaaatcccggccgggaaaatgaacacccgggaccaggtgctgctgccgccg
gcccacccctcttcagacccgggccaccgcagagtcccaggaataacctaccccccaaat
ttcccccatgttcccactccagaccccacgtctcctgaaagagggctcccgggcgccgtg
gaggtgcagcagtccagcagcaccacaggaatggtggtcggcatcgtggcggccgccgcc
ctctgcatcctcatcctgctctacgccatgtacaagtaccgcaaccgcgacgagggctcc
taccaggtggaccagagccgcaactacatcagtaactcagccacgcagagcaacggagcc
ctggtgaaggagaaacagcccagcactgccaagacggtcaccaagaacaagaagaacaaa
gacaaagagtactacgtctga
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