Anoplopoma fimbria (sablefish): 129093079
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Entry
129093079 CDS
T09102
Name
(RefSeq) uncharacterized protein LOC129093079 isoform X1
KO
K24066
synaptopodin-2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129093079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129093079
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
129093079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
129093079
NCBI-ProteinID:
XP_054456955
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All DBs
Position
7:17309096..17332195
Genome browser
AA seq
1241 aa
AA seq
DB search
MFKKHRQRAKKYTLVSYGTGEDEPEYSDEDDEENEDEKQEIHAVEFTLVAPNGSEIEKHF
LTNAHSSKSVLTVNRDKGLLEIERNLNNQAEMECLPETMGKGAVMFAQRRQRMDEISAEH
EDLRSQGIPVEGVSMVEKKTEDHSYMQSTTEGHAYMDVNIHQQSQHQQQFQQYQEQQYYE
QQKNYQQQQLQQQQQQQQQQYQQQYQQQQYEQQHYQQQQIYQQQQQYHQEQQQMQQYSTN
TNGTVHHQTSEMQSSFSNRTAKPFSVETTPATPYSPTISGTNQDFVGQGEQIASRDERIS
TPASRTGVLSDARRRNAGKPMFTFKEAPKVSPNPALLNLLNRKDKKLGFESGPEEDYLSL
GAEACNFLQSQQIKHKTPPPVAPKPVINPNSPPWSPEIEVTNQDMPQQAENSVSTPAVAP
TTETTPAPELEPTPAPAHEPSPPPAPQETLDSTTTEEQHTWTPPEPESQQQPMQVTAQEE
NSHINSTLQPEPSPVSSWTPAKTQAQLQPSTNSWHPAQVQPQEPTHSHSPPQPPWMTRQT
SQTQAQPQPPTNIWTPQIQPSWTQPQGQAHAQTQAQPPWTQPQGQAQAQTQAQPCWPQPQ
EQPHAQTQAQPPWTQPQGQAQAQTQAQPCWPQPQEQPQSHSQVQPPWAHSHEQPNLQQVQ
PTWGQPQEPMQQQPQAPWAQPSQTDSQHQPPWVQQPQQKSQTQPPWAQQVQPESQPQPPW
VQQPQHQAPQQAWPQAQAPGQAQAPGQAQAPGQAQAPGQAQAPGQAQAPGQPQPPWVSAQ
PQQQQQPSINEWPPSQTQAQVQPPWIQAAQAQPPAQPQAIMNPWPPVPTQAQSPPSWDQQ
PAEHGQQPMNSWAQEQNPAQHQPPWAQPVPPQPKPQPNWQQSTSKTPPQATMNTWPPPQT
QHQAPVNASAPQSQQTPVNVSSSMVNTRPSPKPWHPPQDAPQNRTPPSPPQRLHSLTIGQ
RASSPINPMASVLNPSSQGSTFGMPAVRGKGADMFAKRLSRMEKFVVDSETVQANKTSRP
TSPVASLPNEWKYTPNLLGRSYSLSPLVRVPSTGQNTASASSSPKPPAWASTTPPARQAS
WPQRVRKPLMPWEAASRHPLGLVDEAFAFQDLQQSLATNVCLAAQRKMLPEPPAEWKARV
SYEAQQKPGSQTWSRSQSGSERRAPLPSFGSLTRSAVSAPVGHAGYRSLPRQWQPQRASH
VTVLHHDDRGEENAGSSNLQGGSSPGRARTTLWLGLKATDS
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaacatcggcagagggccaagaaatacacacttgtgagctacggcacagga
gaggacgaaccagagtacagcgacgaggacgacgaggaaaacgaagacgagaaacaagaa
atccatgctgttgaatttacccttgtggctccaaacggttctgaaatagaaaagcatttc
cttactaatgcccatagtagcaaaagtgtgctaactgtcaatagggacaagggtctcctt
gagattgaaaggaacctaaacaaccaagcagagatggaatgtttgcctgaaaccatgggc
aagggtgccgtaatgtttgcccaacgacgtcaaaggatggatgagatttcagctgaacat
gaggaccttaggagtcaggggattcccgtggaaggagtgtcaatggttgaaaagaagaca
gaagaccactcctacatgcaatccacaacagagggccatgcttacatggatgtaaatata
caccaacaaagccaacaccaacaacagtttcagcaatatcaggaacagcagtactatgag
caacaaaagaactaccaacaacaacaactacaacaacaacaacaacaacaacaacaacaa
taccaacaacaatatcagcagcaacagtatgaacaacagcattatcaacaacagcaaata
tatcagcagcagcaacaatatcatcaagagcaacagcaaatgcagcaatattctacaaac
accaatggcactgtccatcatcaaaccagtgaaatgcagagttctttcagcaatcgtact
gcaaagccattctcagtagaaaccacgccggctaccccttattctcccacaataagtggg
accaatcaagattttgtgggccaaggagagcagatagcttcccgggatgagcgcatttct
acccctgcaagccggactggtgttttgtcggatgcaaggagaagaaatgctggcaagcct
atgttcacgtttaaggaagcaccaaaagtatcgcctaatccagcactgctaaacctgctc
aacagaaaggataagaagttgggatttgagtcaggacctgaggaagactaccttagcctt
ggggctgaggcttgtaatttcttgcagtctcaacaaataaaacataagactcctccacca
gtagctccaaagcctgtgatcaaccccaactctcctccttggtcccctgagatagaagtg
accaaccaggacatgcctcaacaagctgaaaatagtgtgtccacacctgctgtggccccc
accacagagactacccctgctccagaactagagccaaccccagcacctgcccatgagccc
tcaccccctcctgccccccaggagactcttgacagcaccactacagaggaacagcacaca
tggactcccccagagcctgaatctcaacaacaacctatgcaagtgacagctcaggaggaa
aatagtcatataaattctaccctgcagcctgagccttctcctgtttctagctggactcca
gcaaaaacccaagcacaactacagccatctaccaattcttggcatccagctcaagtgcag
ccacaggaaccaactcatagtcactctccaccacagccaccgtggatgacacgacaaact
tctcagacgcaagcacagcctcaaccccccacaaatatttggacccctcaaattcagcca
tcctggactcagcctcaagggcaagcacatgcccagacccaagctcagccaccctggact
cagcctcaagggcaagcacaggcccagacccaagctcagccatgctggccccagcctcaa
gagcaaccacatgcccagacccaagctcagccaccctggactcagcctcaagggcaagca
caggcccagacccaagctcagccatgctggccccagcctcaagagcaaccacagtctcat
tcacaggttcagccaccctgggcacactcacatgagcaaccaaatctgcagcaagtgcaa
ccaacttggggtcaacctcaagaaccaatgcagcagcagccccaggccccatgggcacag
ccatctcaaacagactctcagcatcaaccaccatgggtgcaacaaccccagcaaaaatca
caaacacaacctccttgggctcaacaggttcagccagaatcccagccacagccgccatgg
gttcagcaaccacagcatcaggctccacaacaagcatggccacaggcccaagcgccaggt
caggcccaagcgccaggtcaggcccaagcgccaggtcaggcccaagcgccaggtcaggcc
caagcgccaggtcaggcccaagcgccaggtcagccccaaccaccgtgggtctcagctcaa
cctcaacagcaacagcaaccttcaattaatgaatggcctccatcacaaactcaagcccaa
gttcagccaccttggatccaagcagcccaagcacaacccccagcgcagcctcaagccatt
atgaatccatggccgccagtacctacccaggctcagtcccctccatcatgggaccagcag
cctgcagaacatggtcagcaacccatgaattcttgggcccaagagcaaaatccggcccaa
catcaaccaccttgggctcaaccagttccaccccagcccaaaccacagccaaactggcaa
caatccacttcaaagactccaccacaggcaacaatgaatacatggcctccacctcagaca
caacatcaggcacctgtaaatgcttcggcaccacagtcacagcaaacgcctgtgaatgtt
tcctcgtcgatggtgaacactcgtccgtctccaaaaccttggcatccaccacaagatgcc
ccacaaaaccggacccctccgtccccaccacagcgactgcactctttaaccattggtcaa
cgagcttcatcacccatcaacccaatggccagtgtcttaaacccatcatcacaaggttca
acttttgggatgccagccgtcagagggaaaggagctgatatgttcgccaagaggctgtct
cgtatggagaagtttgttgtggactctgagactgtgcaagcaaacaagactagccggccc
acatcgccagttgcttccttaccgaatgagtggaaatatacacccaacttacttggcagg
agctactccctttccccactagtcagagtaccatccacaggccagaacacagcttcggct
tcttcttctcccaagcctccggcttgggcctccacaactcccccagccagacaggcatcc
tggccacagagagtccgcaaacccctaatgccctgggaggccgcctcccgccatcccctg
ggcctggtggatgaagcctttgctttccaggacctccagcaaagcctagccacaaatgtt
tgcttggcagcccagcgcaaaatgttgcctgagccgccagcagagtggaaggccagggtg
tcttatgaagcccagcagaaaccaggcagccagacttggagccggagccagagtggcagt
gagcgtcgagctccgctgccatcatttgggtccctaacaaggagcgctgtctctgcccct
gtcggtcatgctggttacaggtctctgcccagacagtggcagcctcagagggctagccat
gtcacagttctccaccatgacgaccggggagaggaaaatgcaggcagcagcaatctgcag
ggaggttcaagcccaggaagggcgaggacaactctgtggctgggtctgaaggccactgac
agctga
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integrated database retrieval system
