Anoplopoma fimbria (sablefish): 129093093
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Entry
129093093 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129093093
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
DUF6063
L27_1
Motif
Other DBs
NCBI-GeneID:
129093093
NCBI-ProteinID:
XP_054456978
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All DBs
Position
7:complement(17968187..18011792)
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AA seq
2055 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGXVPTEEKLSLLKSVLQSPLFHQILALQKSVQHLRD
QESVPVSSGSDLSDNVAAVKPNGGHVPYSDTSASTLINGKTSCEEFEHLINSMAQGRSVT
HVDLQKPVSGGLGFSVVGLKSENRGELGIFIQEIQPGSVADCDGKLKEADQILAINGQLL
DQRVTHQQAIGILQSAPERVQLSVARGPIPQLASPAVSRTPSAASTLSASSSAVQHVETI
ELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLYSMGSEQV
AQVLRQCGNRVKLVVTRGPVEENTSLSAVMPVVLPTVNEQGYEEEEDEAFDVSLTKNSQG
LGITIAGYVGDKNSEPSGIFVKSITKDSAVDQDGRIHVGDQIIAVDCVNIQGYTNQQAVE
VLRHTGQTVHLKLIRRGFRPEEIPPSVVPVVAAPSPSTTIPTTTVVMMELELEQKEAEEA
ARVTTDEKPLQTKSEGSDVSPAEDQLTEDKYGMELTPFEEEDLMKKWQEILGPSNEVVVA
QVEKFSENSGLGISLEANSGHHYIRSVLPEGPVGRCGKLFSGDELLEVNGLSLIGETHKE
VVRILKELPLCVNMTCCRPAPHLQTDMDDVQPESETLSTTSTLKKQIDLSGVPVAEHSEV
NVAAATQDNVTEDVIGSPLAMWELEIQNIELEKGEGGLGFSILDYQDPLDPAKTVIVIRS
LVPGGVAEQDGRLLPGDRLMYVNTTDLENASLEDAVQALKGANLGKVQIGVAKPLPGICG
YSQSPHPYGEQEFTSSSTIHSFDFKNIWVEEGEEEGLTEGVVYRAEPALIDTCEVDLSDE
KVLDLTYSGMEDDTFQASMIALHGSSCSADLDFLHSSTPKLTARLDLLEEHPRFATPSGL
ADDTRATSPEESASFNPPSLRGHDPTFNAILSGSNQFLALHSTQEEPVESSNSYSPFAEI
VTGSSVPDEPVESLYYPKEPPMSFEDIGDIKILMKGEETGVKESAEADDKEALTSGSNFE
RTITVVKGNSSLGMTVSAMKDGLGMLIRSIIHGGSISRDGRLGVGDLILAINGEPTGHLT
NAQARSMLRRHSLIGPDLGSACAPEDDLCPFYVITYVPAEYLEEYKASREQAKEDVFCET
DPVPVADQKDIPSLPEREDGEGEESAAYNNWNQPRKVELFRAPGKSLGISIVGGRGMGSR
LSNGEVMRGIFIKHILEDSPAGQNGTLKTGDRIVEVDGADLRDASHEEAVEAIRRAGNPV
SFLVQSIIHRPRSSVTDSSEERAAAKTRDNKDKPVKREAAKASPTSPVLLLPVVPHVGET
DTDTLTEIPGGPAEAEEENEEEVEVEDEFGYNWKNIIQRYGSLPGVLHMIELEKGKTGLG
LSLAGNRDRSRMSVFVVGIDPNGAAGRDGRMVVGDELLEINGQVLYGHSHQNASSIIKSS
PSQVKIIFVRNMEALDQMAVGPVREHEGDTVEPHTEVETTAANGDGDTSKYVHHSIDLQE
DGAIGITFVEGNTESGDENQSISEVKEHTDKGDCTKPEDNLLAVNGESVLGYAVEKSTCL
DGDSSDDVCPSLPSMPSASTSTLGQPQAEAITSQSRSSTPSTLACDPTTCPIIPGCETTI
DISKGRTGLGLSIVGGCDTLLGAIIIHEVYEEGAASKDGRLWAGDQILEVNGIDLREASH
DEAINVLRQTPQRVRLAVFRDEAQYKEEDLWDSFTVELHKKPGQGLGLSIVGRRNDTGVF
VSDIVKGGLVDTDGRLMQGDQIMSVNGEDVRSTTQEAVAALLKCCVGPITMEVGRFKAGP
FHSERRLSQSSQMSETGSNKAASQSCPDSGNLPGDIDKLSQSLDYPEHQDTRTVEFIKIP
NDSLGISIAGGVGSPLGDIPIFIAMMNPVGLAAQTQKLKIGDRIVSICGTSAEGMTHSQA
VTLLKNATGTIQLQVVAGGDTTVTGPSQEQAVGGLTPSCIFQDDLGPPQYKTINLERGPD
GLGFSIVGGHGSPHGDLPIYVKTVFGKGAAAEDGRLKRGDQIMAVNGQTLEGVTHEEAVG
ILKRTKGTVTLTVLS
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaacaatggatacacagcgtgccttgcaggcggtggagcgtctccaggcaaaa
ctgaaggagcgggggnaggtgcccaccgaggagaagctcagcctgcttaagtcagtgctc
cagagccccctcttccaccagatcctggccttgcagaagtctgtccagcatctcagagac
caggagagtgtcccagtgtcgagtgggagtgacctcagcgataatgttgcagcagtcaaa
cccaacggcggccatgttccctactcagacacatcagcttctacactcatcaatggcaag
acatcgtgtgaagaatttgaacacctcattaactccatggcgcaggggcgctctgtgaca
cacgtggacctacagaagccagtgtcaggaggtctcggcttcagcgtggtgggcctgaag
agcgagaaccgaggagagctcggaatcttcatccaggaaattcaaccaggaagtgtggct
gactgtgatgggaagctcaaagaagctgaccagatcctagccatcaatggccagctgctg
gaccagagagtgacccaccagcaggctataggtatcctgcaaagtgcgccagagagggtg
cagctctcggtggctagaggtccaatacctcagctggccagtcctgcggtgtcccgcacg
ccctcggctgccagtacactgtcagccagctccagcgcggtgcagcacgtggaaacgatt
gaactggtcaacgatggcactggacttggcttcggtatcgtgggaggaaagaccactggg
gttattgtcaaaaccatccttcctggaggcatagctgatcaggatggccgcctgcgcagt
ggggaccacatcctgagaatcggagacactgacctgtacagcatgggcagcgaacaggtg
gcccaggtcctcaggcagtgtgggaacagggtgaagctggtggttaccaggggccccgtg
gaggagaataccagtctctctgctgtcatgcctgtggtgctccccactgtcaatgaacag
ggctatgaggaagaggaggatgaagcatttgatgtgagccttaccaagaacagccaggga
ctggggatcactattgctggctatgttggagataaaaattcagagccctctggcattttc
gttaagagcataacaaaagacagtgccgtagatcaagatggccgtattcatgttggagac
cagataatagctgttgattgtgtaaacatccagggatacaccaatcagcaggcagtggaa
gtgctcagacacacaggccagacagtccaccttaagctgatccggcggggcttcaggccc
gaggagatccccccttcggtggtccccgttgtcgccgccccatccccttccaccaccatc
cccacaaccactgtcgtcatgatggagttagagctggagcagaaagaggctgaggaagct
gctcgagtcaccacagatgaaaagcctctccagacaaagagtgaaggatctgatgtcagc
ccagccgaggatcagcttacagaagacaaatatgggatggagctaacaccctttgaagag
gaagatctaatgaagaagtggcaagaaattctgggtcctagtaatgaagttgtagtggct
caggtggagaagttcagtgagaacagtgggctgggcatcagtctggaagccaacagtggg
catcattacatccgctctgttctacccgagggacctgttggtcgctgtggcaagctgttc
agtggagatgaactgcttgaggtcaatggtttatccctgattggtgaaacccacaaggaa
gtagtcagaatcttgaaggagcttccactttgcgtgaacatgacatgctgtaggcccgcc
cctcacctgcagactgacatggatgatgtccaaccagaatcagagactttgtcaacaact
tcaacattaaagaaacaaatagacctgagcggcgtaccggttgctgaacactcagaggtg
aatgtagcggcggcgacacaggataatgtgacagaggacgtgataggatctcctttggct
atgtgggaattggagatccagaacatcgagcttgaaaagggagaagggggattgggattc
agcattctggactatcaggacccactggaccccgccaagacggtgatcgtgattcgctct
ctggttcccggcggtgtggccgaacaagatggccgactgttgccaggagaccgactcatg
tatgttaacaccacagacctagagaacgccagtctggaggacgcggtccaggccctgaag
ggagccaaccttggcaaggtccagataggagttgccaaaccactgcctggaatatgtgga
tattcccaatctccacacccatatggtgaacaggaatttacttcatcatccaccatccat
tcatttgacttcaaaaatatttgggttgaagaaggagaggaagaaggactgactgagggc
gtcgtttaccgagcagagcctgcattgattgacacctgcgaagtggacctgtctgatgaa
aaggtgttagaccttacttactctgggatggaggacgacactttccaggcatccatgatt
gctcttcatggcagcagctgtagtgcagacctggatttcctgcactcgtccacgcccaag
ctgacagctcgtctggacttgttggaggagcatccccgctttgcgacgccgtccggccta
gcggacgacacgcgagcgacctcccctgaggagtctgcctctttcaatccgccgagtttg
agaggtcacgacccgacttttaatgccatattaagcggttctaatcagttcctggcactg
cactcgacacaagaagaaccagtggagagctcaaactcatacagcccattcgctgaaata
gtgaccggatcgtctgtcccagatgaacctgtggagtctctttactatccgaaggagcca
cccatgtcttttgaagacattggagatataaagatcttgatgaagggcgaggagactggt
gtgaaagaatcagcagaagccgacgacaaggaagcactgacctcagggagcaattttgaa
aggaccatcacagttgtcaagggcaactccagcctagggatgaccgtgagcgccatgaaa
gatggtttgggaatgctgatccgcagtataatccacgggggctccattagccgtgatgga
cgtctgggtgtcggtgatctcatcctggccatcaacggagagcccactgggcacctgacc
aatgcccaggctcgctccatgcttagacgacactccctcattggaccagacctgggatct
gcttgtgcacctgaggacgatctgtgcccattttatgtcattacatatgttccagcagag
tatcttgaagagtacaaggccagccgagagcaggctaaagaagatgtcttctgtgaaacg
gatccggtcccagtagcagatcaaaaagatattccaagcctccctgaacgggaagatggc
gagggagaggagagtgccgcttataacaactggaaccaacctaggaaagtggagctcttc
cgagcgccaggcaagtccttgggtatcagcattgtcgggggccgagggatgggcagccgg
ctgagcaatggagaggtgatgaggggcatttttatcaagcacatcctggaggacagtcct
gctggacagaacgggaccctgaagactggagacagaatcgtagaggtggatggagcagat
ctaagagatgctagtcacgaggaggcagtggaggctatacgcagggcaggcaaccctgtg
tccttcttggtccagagtattattcacaggcccaggtcatcggtaacagactccagtgag
gagagagctgcagccaagacaagggacaacaaggacaagcctgtgaagcgtgaagcggcg
aaggcatctcccaccagccctgtcctcctcctgccagtggtgccccatgtgggagagact
gatacagacacgctgacggagattcctggcggacctgctgaggcagaggaggagaatgag
gaggaggtggaggtggaggatgagtttggatacaactggaagaacataatccagcgctac
ggcagccttccaggtgtcctacacatgattgagctggagaaaggcaagacaggcctgggc
ctcagcctggcggggaacagggaccgctcacgcatgagcgtgttcgtggtgggaatagac
cccaacggggcggccggcagggacggacgtatggtagtgggagatgagctgctggagatc
aatgggcaagtcctttacggccacagtcaccagaatgcatcctccataataaagagctct
ccatcccaagtcaaaatcatctttgtcaggaacatggaggcgctggaccagatggccgtg
ggacccgtgagagaacacgagggagacacagtggagccccacactgaggtagaaaccact
gctgctaatggggatggcgatacttcaaaatatgtgcatcacagcatagacctgcaggag
gatggagcaattggaatcacatttgtggagggaaacactgagagtggagatgagaatcaa
agtatatctgaagtgaaagaacacacagacaaaggggactgcacgaagccagaggacaat
ctcttagctgtgaatggtgaatcagtgctcggctacgctgtggaaaagtcaacatgcctg
gatggggatagctcggatgacgtctgtcccagcctacccagcatgcctagtgccagcacg
agtacccttggtcaaccacaggcagaagccatcactagtcagagtcgctcttcgacccct
tccactctggcctgtgacccgacgacctgtcccatcatccccggctgtgagaccaccatt
gacatctccaagggccgcacaggcctgggccttagcattgtgggaggctgtgatactctg
ctgggggccatcattatccacgaagtttacgaagaaggagcagcctcaaaagatggcagg
ctctgggcaggagaccaaatcctggaggtgaacggtatcgacctgcgtgaagccagtcac
gatgaggccatcaacgtgctgcggcagaccccacagagagtccggctggcggtcttcagg
gatgaggcccagtacaaggaggaggacctgtgggactcgttcaccgtggagctccacaag
aagcctggccagggattgggcctgagcattgtaggaaggaggaatgacacgggagtgttt
gtgtccgatattgtgaaaggaggcttggtggacaccgacggccgcctgatgcagggcgac
cagatcatgtcagtcaatggtgaggatgtcaggtcgaccactcaggaggccgtggctgca
ctactcaagtgctgtgtggggccaataaccatggaagtagggaggtttaaggcgggccct
tttcactcagagagaagactgtctcaaagcagtcagatgagtgaaacggggagcaacaag
gcggcctctcagtcatgtcccgactctgggaaccttcccggtgacattgacaaactaagt
cagagtttggattatccagagcatcaggacaccagaacagtcgagttcattaaaatcccc
aatgattctctgggtatcagtatagcggggggtgtgggcagccccctaggcgatatcccc
atcttcatcgccatgatgaatcccgtcggcctggctgctcagacacagaagcttaagatc
ggggaccgcattgtcagtatctgtggaacctctgctgaaggcatgacccactcacaggct
gtcactctgctcaagaacgccacaggcacaatacagctgcaggtggtagcgggaggtgac
accaccgtgacaggtccctctcaggagcaggcagtcgggggtctcacgcccagctgcatc
ttccaggatgaccttggcccacctcagtataagaccatcaaccttgagaggggaccagat
ggactggggttcagtatagtcggaggacacggcagcccccatggagacttgccgatctac
gttaaaactgttttcggaaagggggcggcagcggaggacggccgcctgaagagaggagac
cagataatggccgttaacgggcagactctggagggcgtcactcatgaagaagccgttggc
atcctgaaaaggaccaaaggaactgtcacgctcactgtgctgtcatag
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