Anoplopoma fimbria (sablefish): 129093109
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Entry
129093109 CDS
T09102
Symbol
trip6
Name
(RefSeq) LOW QUALITY PROTEIN: thyroid receptor-interacting protein 6
KO
K12792
thyroid receptor-interacting protein 6
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129093109 (trip6)
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Gene cluster
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Motif
Pfam:
LIM
DUF7576
zf-dskA_traR
Motif
Other DBs
NCBI-GeneID:
129093109
NCBI-ProteinID:
XP_054456995
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Position
7:complement(19714834..19722894)
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AA seq
585 aa
AA seq
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MSGPTWLPPRTLDSPERAXPQMSHSAGSAIYRAPNKKGTSDFWPKYGHYDQNGGGGGGGG
GGGGGGGGGGGGMANRYMATGPTGGPVHHSSGDHYYPPPHGPKEDRNWSPHMDSYELMHR
GGPEKPANYHSKIDADIDSLTSMLADLDSNPQDASTQLYDNVPYNKYLSGDHYKPAHQSA
GPPQGRPSMGYPPHPQSQYHQAPRYAGEHQSPQYSTSHQQDYYSPSSTPKPYPQPVPASY
TTASTPTGPRFSVQVKTAQPVTYSQTGRQAEQAYTPPPPRQHVSRPPPQTSPQGWYPPHP
GSQAQEMHSEVVYKGSSSGPGGRVNQVPQSKRGMENHQTGSGAALSPAYQSSKQGMATPR
PEEELDRLTKKLVYDMNHPPVEDYFGRCARCGDNVVGDGSGCIAMEQVFHVECFTCITCH
ARLRGQPFYALDKKSYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFTCVVCNCC
LDGVPFTVDATSQIHCIDDFHRKYAPRCSVCGEPIMPEQGQEETVRIVALDRSFHVNCYI
CEECGLLLSSEGEGRGCYPLDGHILCKSCSACRIQDLSAKISTDC
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcccacctggctcccaccgaggactctggatagccccgagcgagccngcccc
cagatgtctcactctgctgggtcagcaatctaccgagcccccaataagaaggggacgtcc
gacttctggcctaaatatggccactacgaccagaacggaggaggaggaggtggaggagga
ggaggaggaggtggtggtggtggtggtggtggtgggatggccaacaggtacatggcaact
ggacccacaggtgggcccgttcatcattcgtctggcgatcactattacccccctccccat
ggtcccaaagaagaccgcaactggagccctcacatggacagttacgagctgatgcaccgt
ggtggtcctgaaaagccagccaactatcactccaaaatcgacgctgatatcgactccctc
accagtatgctcgcagatctggacagcaacccgcaggacgccagcacacaactgtacgac
aatgtgccttacaacaagtacctctcaggggatcactacaagcctgctcaccagagtgca
ggacctcctcagggtcggccatccatgggctacccccctcacccccagagccaataccac
caggccccccgctacgccggcgagcaccagtcccctcagtactccacctcccaccagcag
gactactactccccctcttcgacccctaagccgtaccctcagcccgtcccggcctcctac
accactgcctccacccccacggggccgaggttcagcgtccaggtcaagacggctcagcca
gtcacctactctcagacggggaggcaggccgaacaggcctacacgccaccccctcctcgc
cagcacgtgtcgcggcccccaccacagacaagtccgcagggctggtaccctccacatccc
ggatcacaagctcaggagatgcactctgaggtggtgtacaaggggagcagctcaggaccc
ggaggacgagtgaaccaggtcccccagtccaagagagggatggagaatcatcaaacaggg
tcgggggctgcactgagtcctgcttatcagtccagcaagcagggtatggcaacaccccgg
cctgaggaagaactggatcgacttaccaagaagttggtatatgatatgaaccacccccct
gtggaggactattttggccgctgtgcgcggtgcggtgacaacgtggtcggtgacggcagc
ggctgcatcgccatggagcaggtgttccacgtcgagtgcttcacatgcatcacctgccac
gcccgtctccgggggcaacccttctacgccctcgacaagaagagttactgtgagagctgt
tacattagtacgttagagcgctgttcaaagtgctccaagcccatcctggaccgtatcctg
cgggccatggggaaggcctaccaccctcgctgtttcacgtgtgtggtttgtaactgctgc
ttggacggggtgcccttcaccgtagatgccacctctcagatacactgcatcgatgacttt
cataggaagtacgctcctcgttgttcggtttgcggtgagcccatcatgcctgaacagggc
caggaggagaccgtgaggattgtagctctggaccgcagcttccatgttaactgttacatc
tgtgaggaatgtggtctcctgctgtcctctgaaggggagggtcgaggctgttacccgctg
gacggccacatcttgtgtaagagctgcagcgcgtgccgcatccaggacctctcggccaaa
atctccactgactgctaa
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