Anoplopoma fimbria (sablefish): 129093241
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Entry
129093241 CDS
T09102
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04371
Apelin signaling pathway
afb04910
Insulin signaling pathway
afb04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129093241 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129093241 (ppargc1a)
04920 Adipocytokine signaling pathway
129093241 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
afb03029
]
129093241 (ppargc1a)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
129093241 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SR-25
Motif
Other DBs
NCBI-GeneID:
129093241
NCBI-ProteinID:
XP_054457166
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Position
7:16779365..17026615
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AA seq
1297 aa
AA seq
DB search
MDGYARTEDELFSSCLLNLTWENCYEQCAALVGEDQPLCPDLPELDLSELDVSDLDADSF
LGGLKWYSDQSEIISTQYGNDASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEA
LADGDVTNASDRSCPSSPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYTGGKAQNHAV
GSNHRIRPPPAVVKTESPWNGKARGGSSQQNRPVRRPCTELLKYLTATDDILLHTKASEA
KSTWGGASSRDKGCLGLGASSSSSSPSSSSTSSFSSLSSNSSSSSSTTSKKKSAVPSHQQ
QQQQQQQQQQQQQPPPQHHQRGESRAAGECSVAGVGAGKWQRCTHDDGVEESEGASIPVG
HRTSTCGHARPKLEHGPPSEEGRPPGDAGRLAVARFIRYMHSYSLPPREVSHSCEHCREA
EGATQASEGFGRQGRRNSRGASRAPHRHITVTIKKREEKPGHPLLSQLLTSKRRPARYRA
HLLPPQITPSPTIQSKSAGKRSESPAEAPSKVEEEELGGSNDCRNLKVSQLEEPDSGSLL
SPLTFDLESWVNQPDSGLDMGFGLEHRWLSQGFCGEDVDHDDDDDDGVDDDDHVTGSPAA
VLSQGPPSPLFPDTRIAEPAPPCIIQGHGHPHRQALSEHPDDQGLPLLAKPTTLPLPLTP
ESPNDHKGSPYENKTIERTLSVEIAGTPGLTPPTTPPHKASQENPFKASLKTKLSSCSSS
ALACKRARLSELGPGALAPAPGASGGGPTRKGPEQTELYAQLSKASTALPYPVTQHAVGG
GLEEHRGTSNNKRVAPRGYSDHDYCQASASTKKDGGTATVTMTPAAAKMTVTSGASAAPV
PTAGKVGDRHVQRKDSGMPPPRSSSSSSCSPLSASSGRLAQQQNVASVNGEAARVQELGK
QTLTQTAQIPSQEATIDWDQFHSSAISRKLLCDQEIREELNKHFGHPLKALYSQGGKERE
PGSKPSKAAAAKSLEETENGSCFQRPPGSSYLHPGFLPFQDELELGGSRESRFLYPWEGT
PLDLLFDCPPCSPSCSPPSSCSPSRGSVSPPSSLPLSPSGPFCWTSSGSRSRSRSHSGSR
NTSSHLRRRSLSSSPDRRPSWSRQNTDSSTFRSRTHKSPHPQSRSPLSRRPRYDSYEDYQ
HERLKREEYRRDYEKREFERAEQRERQKQKAIEERRVVYVGRLRSDCTRTELKRRFEVFG
EIEECAVNLRDDGDNFGFITYRYTCDAFAALENGHTLRRSNEPQFELCFGGQKQFCKSHY
TDLDSHSDDFDPASTKSKYDSMDFDSLLREAQRSLRR
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggacggttatgcccggaccgaagatgagctgttctcctcatgcctcctcaacctcacc
tgggagaattgctacgagcagtgtgctgccttggttggtgaagaccagcccctctgccca
gacctccctgaactggacctctcagagctggatgtcagtgacttagatgccgacagcttc
ctgggcggcctcaagtggtacagcgaccaatcagagattatttccacccagtatggcaac
gacgcatccaatctttttgagaagatagatgaagaaaatgaggccaacttgctggcagtg
cttacagagaccctggacagcatcccggtggatgaggacggattgccttcgtttgaggcc
ctggcagatggggacgtgaccaatgccagtgaccggagctgtccctcctcccccgacggc
tcgccacgaaccccggagcctgaggagccctccctgctgaagaagctccttctggcaccc
gcaaactcccagctcagctataatcaatacacaggtggcaaggcacagaaccatgcagtc
ggcagcaaccaccggatcagaccaccacctgccgtcgtcaagacggagagcccctggaat
ggcaaagcaagagggggctccagccaacagaaccgccccgtgaggcggccttgcactgag
ctgctgaaatacctaacagccaccgatgacatcctgctccacaccaaagccagcgaagcc
aagagcacctgggggggtgccagtagcagggacaagggttgcctgggtcttggtgcttct
tcctcttcctcttcgccatcctcgtcatccacctcctcgttctcctccctctcctccaac
tcgtcttcctcttcctccaccacctctaagaagaagtcagctgtgccatctcatcaacaa
caacaacaacaacaacaacagcagcaacagcagcaacagccgccgccgcagcaccaccag
cgaggtgagagccgggctgcaggcgagtgtagtgtggctggtgttggggctgggaagtgg
cagcgttgcactcacgatgacggggttgaggagtcggagggtgcttctatccctgtcggc
cacagaacctccacctgcggccatgcccgccccaaactcgagcacgggccgcccagtgaa
gaaggaaggccgccaggcgatgcgggccgcctggcagtcgctaggtttattaggtatatg
cattcttattccctccctccccgagaggtgagtcacagctgtgagcattgccgagaggct
gagggcgccactcaggctagtgagggctttggcaggcaaggccgtagaaacagtagaggt
gccagccgtgcacctcataggcacatcacagtaactattaagaaaagggaagagaagccg
gggcaccccttacttagccagctgctcacctccaaacggaggcctgctcggtatcgagcc
cacctactcccacctcagatcaccccttcacccaccattcagagcaaatcagcaggtaag
aggtcagagagcccagcagaggctccctcaaaggtggaggaggaagagttgggagggagc
aatgattgtagaaacctgaaagtaagtcagcttgaagagcctgactcagggtccctgttg
tcgcctctgacctttgacctagagagctgggttaaccagccagactcaggtctagacatg
ggctttggactagagcaccggtggctaagccaggggttctgtggggaggatgttgaccat
gatgatgatgatgatgatggtgttgatgatgatgaccatgtcacgggcagccccgctgcg
gtgctctcacagggcccaccaagcccactcttcccagatactagaattgcagagcccgcc
cctccctgcatcatacaagggcatgggcacccacacaggcaggcactcagcgagcacccc
gacgaccagggcctcccgttgttagccaaaccaaccaccttgccacttcctttgacccca
gagtctccaaatgaccacaagggatcaccgtatgagaacaaaaccattgaacgcacatta
agtgtggagattgctggaaccccaggtctgacaccaccaaccacgcccccccacaaagcc
agtcaagagaatcctttcaaagcatcgctcaaaaccaagttgtcttcatgttcctcatca
gccttggcatgcaaaagagccaggctgagcgaattgggccccggcgctctggccccggcc
ccaggtgcctcaggcgggggccccaccaggaagggtccagaacagactgagctttatgct
cagctgagcaaagcgtccaccgctctaccttacccggtcacccaacacgctgttgggggc
ggccttgaggagcatcgcggcactagcaacaataagcgggtggcgccccgtggctacagt
gaccatgactattgccaggcatcagctagcactaagaaggacggcggcacagccactgtt
accatgactccagcagcagcgaaaatgacggtcacctcaggtgccagcgctgctcccgtg
cccactgcaggcaaagtgggggataggcatgtccagcgtaaggactcaggcatgccacca
ccccgttcatcatcttcatcttcttgttctccattatcagcttcatctggtcgtttggct
cagcagcaaaatgttgcctctgtgaatggagaagcagcccgggtccaggagttagggaag
cagacccttacacaaaccgcccagatcccctcacaagaggccactattgactgggaccaa
tttcactcttctgccatcagcaggaagctcctgtgtgaccaggaaatcagagaagaactc
aacaagcactttggtcaccccttaaaagccctttatagccagggtggcaaggagagagaa
ccaggcagcaaaccaagtaaggctgcagccgctaagtcccttgaggagacagagaatggc
tcctgcttccagaggccgcctggctccagctacctccacccagggttcctgcccttccaa
gacgagctagagctgggtgggagccgtgagagtcgttttctctatccctgggagggcacc
ccgctggaccttctctttgactgccccccctgttctccctcctgttccccaccatccagc
tgctccccttcacgaggctccgtctccccaccttcctccctccccctctcgcccagcggg
cctttctgctggaccagcagcggatcccgctcccgttctcgttcccactctggctcccgc
aacacctcctcgcaccttcggaggcgctccctctccagctcacctgacagacgcccctcc
tggtctcgtcaaaacacagattcaagcacctttcgttccaggactcacaaaagcccccac
cctcagtctcgatctcctctcagccgcaggccaaggtatgacagctacgaggactaccag
cacgagaggctgaagagggaggagtaccgccgggactacgagaagcgcgagttcgagcgg
gccgagcaaagagagaggcaaaagcaaaaagcaatagaggagagacgggtggtgtacgtg
ggccgactgaggtccgactgcacccggacagagttgaagcggcgctttgaagtctttggc
gagattgaagaatgtgcagtgaacctgagggacgatggggacaattttggcttcatcacg
taccgctacacttgtgacgcctttgccgcccttgagaacggacacaccttacgcaggtca
aacgagcctcagttcgagctgtgctttggcggacaaaagcagttctgcaaatcacattac
acagacttggactcccattcggacgactttgatccagcctccacaaaaagcaagtacgac
tccatggattttgacagcttgctgagggaggcccagcgcagcctgagaaggtaa
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