Anoplopoma fimbria (sablefish): 129093278
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Entry
129093278 CDS
T09102
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04814
Motor proteins
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129093278
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129093278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129093278
03036 Chromosome and associated proteins [BR:
afb03036
]
129093278
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129093278
Membrane trafficking [BR:
afb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129093278
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
129093278
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
129093278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Motif
Other DBs
NCBI-GeneID:
129093278
NCBI-ProteinID:
XP_054457215
LinkDB
All DBs
Position
7:14858470..14871437
Genome browser
AA seq
1274 aa
AA seq
DB search
MSSAGTVESTKPPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDDAKGKNDGTVQ
GKRYFTCEENHGIFVRQSQLQVVEDGSGATSPETPDSGSSKIPRQRDIPETPRTTKQTPV
NVKKSSTRRSAKWSTPSRLTPATSLPSLLVRSSGRSSLMASRESLASSLSGDVSEAALSP
HQGALGAPVMPQPSGSPAAVAAQVPATPSKVEPAISKQEEESMRAQVKDLEEKLETLKMK
RTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQADLQKQLKEAKKDAREAQESKDHYMEEM
SDTADAIEMATLDKEMAEERAESLQVEVESLKEKVEELSMDLEILRHEISEKGSDGAASS
YHVKQLEEQNGRLKEALVRMRDLSTSEKQEHVKLQKQMEKKNTELETLRTQKEKLQEEVK
QAEATIDELKEQVDAALGSEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQEN
ARETEMELREQVDLSSAKVREAEKKVEAAQETVADYQQTINKYRDLTASLQEANRELISQ
QNANAEVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVAQSNRQVSLLTSFMPDSFLR
HGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGNLAQGTALRGPAGEQRSFASGLVY
SLNLLQATLHKYEQALNTCGVEVFKRMGTLYSEMIFHERSLDYFIDLLHKDQLDETVQVE
PLTKAIKYYQQLYSVHLADQTEDCTVQLADHIKFTQSVLDCMGVEVARLRAFMAAGQEGS
GLAVLLKDLDTSCSDIKQFCKKIRRRMPGTDVAGVPAALNFGPQEVSELLMECRRQQTRV
VAVLQEVAAAGAQMIAPLAEQEGLNALKLEDIACKAVEQVYGSQGLNGPECLRQSCSSII
TAMNKMATAMQEGEYDADKPQAKTHPVEMRASTVRAEMTDAEGLGVKLEDRETVIKEVKK
SLKIKGEELSEANVRLSLLEKKLDTSTKDADERVEKIQTKLDENLALLKKKEKEFEETMD
ALQADIDQLEAEKTELKQRINSQSKMTIEGLRAPPASGIASIVQGSAGAGLPPSLAGPLQ
VVDSPLLRQQVDAQRLGIKHLKNENNRLKAEKMRAQLASLPPLCPPKLPKASKDSSMPPD
GLNTGIYRRTDQLLATLLKLSSEVKVVDITGKTAVSAGAQLFEQTARLQNLSDALDKLKG
EVAEHVVSNQSGAKASSDFATFPASCFLKAKEEKQGGTVFVGRVTIPCTRGQEQVHRLVL
SQQQLQKVHRLLMA
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcaggaacagtggagtctaccaagcctccaaagattggctctatagtggag
gtgacagggaagggtcagcgtggtactgttgcctatatcggtgcaaccctctttgcctct
ggaaaatgggtgggcgtcatactggatgatgccaaaggcaagaacgatggtactgtgcag
gggaaacgctacttcacctgtgaggaaaatcatgggatatttgtcagacagtcccagctc
caggtggtggaagacggctctggcgccacctcaccagaaactcctgattcaggctcttca
aagatacccagacagagagacattcctgagactcccagaacaaccaagcagacacctgtg
aacgttaagaagtcctcaacccgccgctctgccaagtggagcactccaagtcgtctcaca
cctgccacctccctcccctccctcttggttcgttcctccggccgctccagcctcatggca
tctcgtgagagcctggcgtcctctctgtcgggtgatgtcagtgaagcagccttgtccccc
caccagggtgcactgggggctcctgttatgcctcagcccagcgggtcccctgcagcagtg
gcagcccaggtcccggctactccaagcaaggtggaacctgccatttccaagcaggaggag
gaatcaatgcgagctcaggtcaaggacctggaggagaagctggaaacactgaagatgaag
cggacagaggacaaagccaagctgaaagagcttgagaaacacaagatccagctggagcag
cttcaggagtggaagaccaaaatgcaggagcagcaggctgaccttcagaaacaactcaaa
gaggccaagaaggacgcccgtgaggcacaggagtccaaggaccactacatggaggagatg
tcggacacggcagacgccatagaaatggccacactggacaaagagatggctgaagagcgg
gcagagtcattgcaagtggaggtggagtctctgaaagagaaagtggaggagctctcaatg
gacttggagatccttagacatgagatttcagagaaaggctcagacggagctgcctcaagt
taccatgtcaaacagctggaggagcagaatggcagactaaaggaggcgttggttcggatg
cgtgacctgtctacttcagagaagcaggagcatgtgaagctgcagaagcagatggagaag
aagaacactgagctggagactctgaggactcagaaagaaaaactgcaggaggaggtcaag
caggcggaggctactatcgatgaactcaaggagcaggtggatgctgctctggggtcagag
gagatggtggagaccctgactgagaggaaccttgacctggaggagaaagtcagagagctg
agagaaaccgtcactgatttggaggccataaacgagatgaacgatgagctccaggagaac
gcccgggagacggaaatggagctgagggagcaggtggatctgagttcagcaaaggtcaga
gaggctgaaaaaaaggtggaggctgcccaggagactgtagcggattaccagcagaccatc
aacaaatacagagatctcaccgccagcctacaggaggccaacagagagctgatcagccag
cagaatgcaaatgctgaagttcagcaaccacctgctgaactatttgacttcaagattaag
tttgcagagaccaaggcatatgccaaggccattgagatggagctgaggaaaatggaagtg
gcacagtcaaacagacaggtttccctcctcacctccttcatgccggactccttcctccgt
catggtggagatcatgactgtattctggtccttctgctcatccccaggctcatctgcaaa
gctgagctgatcagtaaacaggcccaggagaagtttgacttgaatgggaacttggctcag
ggaaccgcgctgagaggacctgcaggagaacagcgcagtttcgcctcaggactggtctac
tccctcaacttgctgcaggccactctgcacaaatatgaacaggctctgaatacctgcggc
gtggaagtttttaagcgcatgggtacactctactctgaaatgatcttccatgagcgctct
ctggattatttcatcgacctgctgcataaagatcagctagatgagactgttcaggtggaa
cctctgactaaggccatcaagtactatcagcaactgtacagcgtccatctggcagatcag
actgaagactgcacagtgcagctggctgaccacattaagtttactcaaagtgtcctggac
tgcatgggagtggaggtagctcgtctacgggccttcatggcagcaggtcaggagggctct
ggcttggctgtccttctaaaggacctggacacttcctgttctgacatcaaacagttctgt
aagaagatccgccgtcgcatgcctggaacagatgtagctggagtacccgctgctctcaat
tttggaccacaggaggtgtcggagttgctgatggagtgcaggcgccagcagacccgtgtg
gtggctgtgctgcaggaagtggccgcagctggagctcagatgatcgctccgctggcagaa
caggaggggctcaacgctctcaaactggaggacatcgcctgcaaggctgtggagcaggtg
tatggctctcaaggcctaaacggcccagaatgtctgcgacaatcctgtagctccatcatc
actgccatgaacaagatggccacagccatgcaggaaggagagtatgacgctgacaaacca
caggccaagactcatccagtggagatgagagcatccaccgtcagggccgagatgactgac
gctgagggtctaggagttaaactagaagatagagagaccgtcatcaaggaggtcaagaag
tccctgaagatcaagggtgaggagctgagtgaggccaacgtccgtctgagcctgctggag
aagaaactggacacctccaccaaagatgcagatgaacgggtggagaagattcagaccaaa
ctggacgagaacctcgccctgctaaagaagaaagaaaaggagtttgaggagacaatggat
gccctgcaagctgatatcgaccagctggaggcggagaagacagagctgaaacaacgcatt
aatagccaatccaagatgaccatcgaaggcctgagagccccgcctgcctcgggaattgcc
tccattgttcagggatctgcaggagcaggtctgcctccatccttggctggaccgctgcag
gtggtagactcccctctcctcaggcagcaggttgacgcccagagactgggcattaaacac
ctcaagaatgaaaacaacagactcaaggcagagaagatgagagcccagctggcctccctg
cctccactctgccctcccaaactgccaaaagcgtccaaagatagttccatgccaccagat
gggctaaacacaggcatctatcgcaggactgaccaactgctggctactctgctcaagctg
agttcagaggtcaaagtggtggacatcacaggaaagacagcagttagtgccggtgcacag
ctgttcgagcagacagctcgcctacagaaccttagtgatgctctggacaaacttaaggga
gaagtagctgaacacgtagtgtcaaatcaatctggggcgaaggcttcctctgactttgcc
accttccctgcctcctgtttccttaaggccaaggaagagaagcagggaggaacagtgttt
gtaggacgtgttaccattccatgcacccgtggacaggaacaagtccaccgcctcgtccta
tcacagcagcagctgcagaaagtgcaccgcctcctcatggcctag
DBGET
integrated database retrieval system
