Anoplopoma fimbria (sablefish): 129093297
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Entry
129093297 CDS
T09102
Symbol
taf6l
Name
(RefSeq) LOW QUALITY PROTEIN: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129093297 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129093297 (taf6l)
03036 Chromosome and associated proteins [BR:
afb03036
]
129093297 (taf6l)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129093297 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
129093297 (taf6l)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129093297 (taf6l)
STAGA complex
129093297 (taf6l)
TFTC complex
129093297 (taf6l)
SAGA complex
129093297 (taf6l)
SLIK complex
129093297 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
129093297
NCBI-ProteinID:
XP_054457249
LinkDB
All DBs
Position
7:11375293..11381680
Genome browser
AA seq
645 aa
AA seq
DB search
MADREERRFAEVSRESVKLMSESAGVELGDDVAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSKVEAICGYGAQDALPFRSAKEGELFFVEDRDINLVELALATNIPK
GCAETLVRVNVSYLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLCQPAEGGSGGPPGSAVGAMGYRVSSPGLSPPPEPLSEAVLGIA
SHLQAGGAGCPWEEWSPVPLPAMYCELYSFFGDSLAVRFSTGPGFGSYPPCPSTQLGDAR
KEPCGPASNPDTARKMPQLTANLNISPRQDGSPRTDPXPPSLAATGAGRSLARSSSSASS
SSVQRSRSSSSRSGQRSAGPSRDVFPKARFTSPQTGLPVFSFLIGGRQMGRRCQGRRPFQ
TTFAPTPPIPAVPPRAYAHKLPVIGRVGKPVRRWACSHYSLHLPL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaggagcgccgcttcgcagaggtttcccgggagtccgtcaaactcatg
tccgagagtgcaggcgtggagctgggcgacgatgtggccgctctgctggccgaggacgtg
tgttaccggctcagagaggcaacgcagagcagctctcagttcatgagacatgccaagagg
aggaagctgacggtggaggacttcaacagagctctgcgctggagcaaagtggaggccata
tgtggctacggggcccaggatgctctccccttccgctcggcaaaagaaggggagcttttc
tttgtcgaggaccgggacatcaacttggtcgagttggctctggccaccaacatcccaaag
ggctgcgctgagaccctggtgcgagtgaacgtgtcttacctggacgggaaaggcaacctg
gagcctcaggggacagttcccacagcagtgcagtctctgtcggaggacctgctgaagtac
taccagcagatcactcgggccatcctgggagaggacccccacctcatgaaggtggctctg
ctagacctccagtccaactccaagatcgctgccctgttgccatactttgtttatgtcatc
agcggggtgaagtcagtgagccacgacctggagcagctcaacaggctcttgcacatggtg
aagagcctggtccagaacccctacctgtacctgggctcgtacgtgcgcagcctggtctcc
agtgtcatgtactgcatcctggagccgctggccgcctccatcaacccgctgaacgaccac
tggaccctccgggactatgcggccctgctcctcagccacatcttctggactcacggggat
ctggtgagcggtctctaccaccagatcctgctgtccctccagaaggttctgtccgacccg
gtgaggccgctctgctcccactacggagccgtggtggggcttcatgctctgggatggaag
gctgtagagagagtgctgtttccacacctccccgcctactgggccaacctccaggccgtg
ctggacgactactctgtttccaacgcccaggtcaaagcagacggacacaaggtctacgga
gccatcctggtggcagtggagcgtctgctgaagatgaaggccctgtctctgtgtcagcca
gcagaggggggctccggcggtccaccgggctctgctgtgggtgctatgggttacagggtg
agttcccccggcctcagcccccccccagagcccctgtcggaggcagtcctgggcatcgcc
agccaccttcaggcgggcggggccggctgtccctgggaggagtggagcccggtccctctc
cccgccatgtactgtgagctgtactccttctttggagacagcctggcggtccggttcagc
acggggccggggttcggcagctaccctccctgcccgtcgacgcagctcggtgatgccagg
aaggaaccctgtggccccgcctccaaccccgacaccgcccggaagatgccccagctgact
gccaacctcaacatcagcccaaggcaagatgggagccctcgcaccgacccgnnccccccc
agcctggcagcgaccggagcaggaaggtccctggctcgctcctcttcctctgcctcctcc
tcctcggtgcagcgctccagatcttcctcgtcacgttcgggccagcgttcggccggtcca
tctcgagacgttttccccaaagctcgcttcacctcccctcagacgggacttcctgtgttc
tccttcctcatcggcgggcggcaaatgggccgccgttgccaagggcgccggcctttccaa
accactttcgccccaactccgcccattcctgccgtcccgccacgcgcctacgcacacaag
ctgcccgtcatcggcagagtgggcaaacctgtgcgccggtgggcgtgttcccattactcc
cttcacctgcctctctag
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