Anoplopoma fimbria (sablefish): 129093340
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Entry
129093340 CDS
T09102
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129093340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129093340
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
afb04031
]
129093340
Membrane trafficking [BR:
afb04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
129093340
GTP-binding proteins [BR:
afb04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
129093340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
TniB
Motif
Other DBs
NCBI-GeneID:
129093340
NCBI-ProteinID:
XP_054457315
LinkDB
All DBs
Position
7:3736667..3745465
Genome browser
AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRSGDI
SIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatatggctctatcagttccggctgatcgtcatcggggactccacggtgggg
aagtcgtgtctgatccgccggttcacggagggccgcttcgcccaggtgtccgaccccacc
gtcggcgtggacttcttctcccggctggtggagatcgagccgggcaagaggatcaagctg
cagatctgggacaccgccggccaggagcgcttcaggtccatcaccagggcctactaccgt
aactccgtgggcgggctcctcctgttcgacatcaccaaccgccgctccttccagaacgtc
cacgattggctggaggaggctcgcagccacgtccagccccacagcatcgtcttcctactg
gtgggccacaagtgtgacctggaggcacagcgccaggtgacccgccaggaagcagagaag
cttgcgggggcttacgggatgcgctacgtggagacgtcggcccgcgacgccatcaacgtg
gagcacgccttcaccgagctgaccagagacatcttcgctctggtgcggtccggcgacatc
tcaatccaggagggctgggagggcgtgaagagcgggttcgtcccaaatgttgttcactcc
tcggaggaagtgaccaagagtgaccgccgctgtctgtgttga
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