KEGG   Anoplopoma fimbria (sablefish): 129093346
Entry
129093346         CDS       T09102                                 
Symbol
sf3b2
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129093346 (sf3b2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afb03041]
    129093346 (sf3b2)
Spliceosome [BR:afb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129093346 (sf3b2)
 Complex B
    129093346 (sf3b2)
 Complex C
   U2 SnRNP specific factors
    129093346 (sf3b2)
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 129093346
NCBI-ProteinID: XP_054457321
LinkDB
Position
7:5763117..5773918
AA seq 871 aa
MASDGPPGTEPLPSDIGSAIAALNTWSHPELHAKLAELGAPTMGPREELMDRLKGYMIQT
GILLSKPSDDKSMGSQMSGIPPMPPMPMPPMPPGIGMLQAMSMMPGGXPPPGIHMGMEPP
GLPPPGLSQDDQLKMAQHRAAMVLQQEERAKQQAAVMMEQERQQEMVKMHQGPGPRAMPP
MGAVRGMDPRGPLPPGVSMMPTQKQRVPPPPGEDNREVWQSEEVSVSGPKIPQALEKILQ
LKEIRQEQLTDPAEEEDDEAAETDMNSSAPVMSETEDDDSQISKKDKNRKRRNRKKKSKK
KRALEKKEQAEHQQEQEKKDGSDKEKEKEKDKDKDKEKEKEKEPEVEIEYITEEPEIYDP
NYIFFKRIFEAFKLTDDVKKEKEKEPEKTEKQETAVLRKKGFEDEKKDSDDSDDDMRPDV
PKLSKKKLRRMNRLTVAELKQLVARPDVVEMHDVTAHEPKLLVHLKATRNTVPVPRHWCF
KRKYLQGKRGIEKPPFELPDFIKKTGIQEMREALQEKEDAKTMKTKMREKVRPKMGKIDI
DYQKLHDAFFKWQIKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRIALGMPVGPNAH
KVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPDNCTFGYHAGGWGKPPVDEMGKPLYGDV
FGTNAADFQAKAEEEEVDHAPWGELEPSDEESSEEEEEEESDEEKPDETGFATPADSGLI
TPGGFSSVPAGMETPELIELRKKKIEEAMDGNETPQLFTVLPERRTGPVGAAMMASTHIY
DVSGAMAARKAGGGQESQGVEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMV
AEHAAKQKQKKRKAQPQDTRGGAKKYKEFKF
NT seq 2616 nt   +upstreamnt  +downstreamnt
atggcatccgacggaccgccgggaaccgaacctctcccgtccgacataggcagtgctatc
gcggctctgaacacatggagccacccggagctccacgccaagctggcggagctgggagca
ccgacgatgggtcccagagaggagctgatggacagactgaaggggtacatgatccagact
gggatcctcctcagcaaacccagtgatgacaagtcaatgggctcccagatgtcaggtatc
cctccgatgcccccgatgcccatgccacccatgcctcctggcattggcatgctccaggct
atgagcatgatgcccggagggncccctccacccggcatccacatgggcatggagccccca
ggtctgcctcctcccggcctgtcgcaggatgatcagctgaagatggcccagcacagagca
gccatggtgttacagcaggaggagagagccaagcagcaggctgcggtgatgatggaacag
gagcgtcagcaggagatggttaagatgcatcagggtccggggcccagagccatgcctcct
atgggtgcagtgagaggtatggatccacgtgggccgctgcctcctggtgtcagtatgatg
ccaacccagaaacagagagtgccacctcctccaggagaagataaccgagaggtgtggcag
agcgaggaggtgagcgtcagtgggcccaagatccctcaagctctggagaaaatcctccag
ctgaaggagatcagacaggagcagctcaccgaccccgcagaagaggaagatgatgaggca
gcagagacggacatgaactcctctgcacccgtcatgtctgagacagaagatgatgacagc
cagatctctaagaaagataaaaaccgcaaacgcagaaaccgcaaaaagaagagcaagaag
aagcgagccctggagaagaaggagcaggcggagcatcagcaggagcaggagaagaaggat
ggcagcgacaaagagaaggagaaggagaaagataaagataaggacaaagagaaggagaag
gagaaagagcccgaggtggagatcgagtacatcacagaggagccggagatctacgacccc
aactacatcttcttcaagagaattttcgaggcgttcaagctgaccgatgacgtgaagaaa
gagaaggagaaggagcccgagaagacggagaaacaggagacggccgtgctgcggaaaaag
ggctttgaggacgagaagaaagacagcgacgacagtgatgatgatatgagaccagatgta
cctaaactctcaaagaagaagctgaggaggatgaacaggctgactgtggctgagctcaaa
cagctggtggctcgtccagacgtagtggagatgcacgatgtgacggcccacgagcccaag
ctgctggtccacctgaaggccaccaggaacacggtgccggtgccccgccactggtgcttc
aaaagaaagtatctgcagggcaagaggggtatagagaagcctccgtttgagctgcccgac
ttcatcaagaagacggggatccaggagatgagggaggccctgcaggagaaggaggacgca
aaaaccatgaaaaccaaaatgagggagaaggttcgtcccaagatgggaaagatcgacatc
gactaccagaagctccacgacgccttcttcaaatggcagatcaaacccaagctcacaatc
cacggagacctttactacgaggggaaagaatttgaaactcgtctgaaagagaagaagccg
ggcgatctgtctgatgagctgcgtatcgctctgggcatgccagtcggacccaatgcacac
aaggtgccccccccctggttgatagccatgcagaggtacggcccccctccctcctacccc
aatctcaagatccccggactcaactccccaatcccagacaactgtacgttcggttaccac
gctggaggctgggggaagccgccggtagatgagatgggcaaacctctttacggcgacgtg
ttcgggaccaacgctgcagacttccaggccaaagcggaggaggaggaggtggaccacgca
ccgtggggagaactggagccttcggatgaggagtcgtcggaggaagaggaggaggaggag
agcgacgaggagaaaccagacgagaccggattcgccacaccagcagacagtgggctgatc
acccctggaggcttctcatcagtacccgccggcatggagacccccgagctgatcgagctg
aggaagaagaaaatcgaggaggccatggatggaaacgagacgccacagctgttcacggtg
ctcccagagagaagaactggccccgtaggagccgccatgatggcctcaacacacatctac
gacgtgtcgggggccatggcagcccgtaaggcgggcggcgggcaggagtcccagggcgta
gaggtggccctggctccggaggagctggagctggaccccatggccatgacgcagaagtac
gaggagcacgtccgggaacagcaggcccaggtggagaaagaggacttcagcgacatggtg
gctgagcatgctgccaaacagaagcaaaagaagaggaaggcccaaccacaggacacacga
ggcggcgccaagaaatacaaagagttcaagttctag

DBGET integrated database retrieval system