Anoplopoma fimbria (sablefish): 129093348
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Entry
129093348 CDS
T09102
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129093348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129093348
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129093348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H
zf-RING-like
zf-HC5HC2H_2
T5orf172
FANCL_C
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
129093348
NCBI-ProteinID:
XP_054457323
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All DBs
Position
7:complement(11120136..11125071)
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AA seq
263 aa
AA seq
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MVVEVESFFGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEM
VLIIHGFPSDIAALRFEWAWQHPHSSRRLSHISRRSRKESSLQFHWRIVSNMLRAAPWNR
LPLTARWLKQEYRMDFEPGLQPPLHIPIAFGSVRAKKKLQLAGEEEDEEETSRCFLCKVL
VKVSEKLSCFHPSCGMSSHVICLAKHFLKSEPSHLLPVEGECPACRRSVLWGSLIRHKHR
CFGDLEEFAPAASQSHWADELQI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcgaggtagaaagcttctttggtgtgtacatgttgtactgcaccaatcccaaa
ttcaaaggccgtatttacatcggcttcacggtgaaccctgagcgcaggattggacaacac
aacgccggacggcacagagggggagccaagaggaccagtggaagaggaccatgggagatg
gtcctcataatacatggctttccctcggatattgctgcccttcgttttgagtgggcgtgg
cagcaccctcactcctccaggcgtctctcccacatctcccggcgctccaggaaagagtcc
agtctgcagtttcactggcgcatcgtctccaacatgctgcgggcggcgccatggaacaga
ctgccgctgacggcccgctggctcaaacaggagtacaggatggactttgagcccggcctg
cagccaccgctgcacatccctatagcttttgggagtgtgagagccaagaagaagctgcag
ttggcaggagaggaggaggatgaggaggagacatccagatgttttctctgtaaagtgctg
gtcaaggtgtcagagaagctgagctgtttccacccgtcctgtggaatgagcagtcatgtg
atctgcctcgccaaacatttcctgaagtcggagccgtcccacctcctgcctgtggagggt
gaatgtccggcctgccgtcgctctgtgctgtgggggagtctcatccgtcataaacaccgc
tgcttcggagacctggaggagtttgcaccggctgcgtcccagagccactgggcagatgag
ctgcagatatga
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