Anoplopoma fimbria (sablefish): 129093393
Help
Entry
129093393 CDS
T09102
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2
KO
K15516
fragile X mental retardation protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129093393 (fxr2)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129093393 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
129093393 (fxr2)
mRNA cycle factors
Stress granule specific factors
129093393 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
KH_2
DUF150_C
Motif
Other DBs
NCBI-GeneID:
129093393
NCBI-ProteinID:
XP_054457380
LinkDB
All DBs
Position
7:13560518..13573144
Genome browser
AA seq
675 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGYIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPAEYNKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTAERIRPLNPNSP
ASRNSFHKIPIPVPEDLRDICENDNIHKEFRKAIGANCIFYSAQTHELIVLSTNETTVKR
ASLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIGSHGAN
IQQARKVAGVTAIELEEESCTFRIYGESPEAVKQAREFLEFKEDYFQVPRNLVGKVIGKS
GKVIQEIVDKSGVVRVRIEGDNDKKLPRDEAGRQGAGRDDTASSKEGLVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAPPGRTGGPGVEREKGYLTDE
SSNSLHNSRTYGGRGRGRRPSNSQYSGYGTNSELSNASESEDISEREQRPRGIGGDERGS
RRGGRGRGNNSGRGRGGPGSKPSNSISSVLRDPDSNPYSLLEGEGELAETDISEGTGGDR
RRRSRRRRNDQEPSVMDAATESDGQAGPSENGLDDEARPQRRNRSRRRRNRGNRPEGGSA
SRDRQPVESVSVADYISRADSQSRQNLPQKENHAGPEPKENGTSATKDEITPSKGSPSKG
MTSASETLTLVNGVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaagttcgcggctcgaatggggccttctacaagggctacatc
aaagatgtccacgaagactcgctcacgattgtttttgaaaacaactggcagccagagaga
cagttgcccttcagcgacgtccggttgcctcctccagctgaatacaacaaggatattggt
gaaggagaggaggtggaggtttactcgagggccaacgaacaggagccatgtggctggtgg
ctggcccgagtccgtatgatgaagggagagttctatgtgattgaatacgcggcatgcgac
gccacatacaacgagattgtcacagcggagcgcatcaggcccctcaaccccaacagcccg
gcctcccgaaactccttccacaagatccccatccctgtcccagaagacctgagggacatc
tgtgaaaatgacaacattcacaaagagttcaggaaagcaatcggagccaactgcatcttc
tacagtgcccaaacacacgaactcattgtgctgtctacaaatgaaaccacagtaaagcgt
gcatctcttctgagcgacatgcatttccgcagcatccgtaccaagcttatgctaatgtcc
cgcaacgaagaagccaccaaacatttggagacaagtaagcagttagcatcagcataccaa
gaggaggtaaaagtcagagaggacctgatgggcctagccattggctcccatggtgccaac
atccagcaagcaaggaaggtagccggagtcacagcgatcgaactggaggaggagagctgc
acattcaggatctacggagagagcccagaggcagtaaagcaggctagagagtttctagaa
ttcaaagaagactactttcaggtacccaggaaccttgtaggcaaagtcatcggcaagagt
ggcaaagtcattcaggagattgtggacaagtcaggcgtggtccgtgtgcggattgaggga
gacaacgacaaaaagcttccccgggatgaggcaggcaggcagggggcaggcagggacgac
actgccagcagcaaagagggtctggttcccttcgtgtttgtgggaactaaagagaatatc
agcaatgctcaggctctgttggagtaccatgtgtcctacctccaggaagtggagcagctg
cgcctagagcgtctccagattgacgagcagctccgtcagatcggggttgggtaccgcgca
cctcctggtcgaaccgggggcccgggtgttgaacgggagaaaggctatttgacagatgag
agcagcaactcacttcacaattctcgcacctatggaggccgcggcagagggcgtaggccc
tccaacagccagtactctggatatggcacaaactctgaactgtccaatgcttctgagtcg
gaggacattagcgagcgagagcagcggccccgtggcattggcggggatgagagaggctcc
cgacggggcggcaggggccgaggcaataactcaggacgaggccgtggagggccggggtcc
aagccttccaactccataagctcagtgctgagggacccggacagtaacccatactctctg
ctggagggtgagggagagctggctgagacagacatcagtgaaggcacaggaggagaccgc
cgcagacgctcccgacgtcgccgcaacgaccaggagcccagcgtgatggacgctgccacg
gagtctgacggccaggccggccccagcgagaatggactggatgatgaggcgcgacctcag
cgccgcaacagaagccgccgccgtcgtaatcgtggcaaccgcccagagggaggttcagcc
agccgtgacagacagccagttgaaagtgtgagtgttgctgactacatatcccgtgctgac
tcccagagcagacagaacctgccacagaaggaaaaccacgctggccctgagcctaaggaa
aacgggaccagcgccactaaggatgagataacgccctcaaagggttcccccagcaaaggc
atgacctcggccagcgagaccctgaccttggtcaacggggtctcgtaa
DBGET
integrated database retrieval system
