Anoplopoma fimbria (sablefish): 129093514
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Entry
129093514 CDS
T09102
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129093514 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129093514 (sec24d)
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129093514 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
129093514
NCBI-ProteinID:
XP_054457528
LinkDB
All DBs
Position
7:complement(17290344..17307840)
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AA seq
1041 aa
AA seq
DB search
MSQQGYVAAPPYSQAQPGMGGYQGGFGAGPAQPLYGHYGGQPQAFTAPPTGMMKSPVSSA
AGMPPPPVSNQYNPNVQQNGAHPQRYPAPPAVSAYGQPQSPYNSMASTAPPPAQQLTNQM
SSMNLGNYAPGPMQSAPHPTSSVAQQPFQTFPPPAMGQPQMPPGPQSPHMSPHMSPQMSP
PQSPLASMPMAGPPMAGPPMAGMGRPFPGPPPSGPGGFQQPGLGAAGPAGYPQQGGQFGG
HMAGPQPGMPGAFPGAPGGLAGPPQKKLDPDSIPSITQVIEDDQAKRGGQIYSTNIRGQV
PPLVTTDFTVQDQGNASPRFMRCTTYSLPCTADLAKQCQVPLASIIKPFANLPKNETPLY
VVNHGETGPIRCNRCKAYMCPYMQFIDGGRRYQCGFCNCVNEVPVFYFQHLDHMGRRVDF
YERPELSLGSYEFVATMDYCRNNKPPNPPAYIFMIDVSYNNIKSGLVKLICDELKTLLEN
LPSEEGTESSAIKVGFVTYNKVLHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNYQD
SRTVIYNLLDQIPDMFADTNESETVFVPVIQAGMEAFKAAECSGKLFIFQSSMPTAEAPG
KLKNRDDKKLVNTEKEKTLFQPQKGVYEQLSKECVAQGCCVDLFLFPSQYMDIATMADVP
SHTGGSVYKYCNFQVETDGEHFLRDLRKDVQKSIGFDAIMRVRTSTGFRATEFFGAVHMN
NTTDIEMAAVDCDKAVTVEFKHDDALSEETGALMQCALLYTTVGGQRRLRIHNLSLNCSL
QLSELFKSCETDSLINFFAKSACRAILSQPLKNVKEILVNQTAHMLACYRKNCASPSAAS
QLILPDAMKVFPVYMNSLMKTAPLVGSTELSTDDRAHQRLLIMGMGVEDTQLLLYPRLTP
LHNMDVSSEAHPAPVRCSEERLTDSGMFLLENGHSMFLWLGQGIPPDLIQSIFNLPSLAH
LQGQMCVLPELDNPLSNKVRSIINGLIENRPNSMKLNIVRQKDKPEMLFRQFLVEDKGLH
GGASYMDFLCYVHREIRQLLT
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacagggttatgttgctgcaccgccctactcccaggcacagccagggatgggg
ggctaccaaggtggatttggagctggtcctgcacagcccctctatgggcactatggggga
cagcctcaggcgttcaccgctccaccaacaggtatgatgaaatcgccagtttcctctgct
gccggtatgcctccacctccagtgtccaatcagtacaatccaaatgtccagcagaatggt
gctcatccacaaagataccctgctccaccagctgtttctgcttatggacaacctcagtcc
ccttacaacagcatggcttctacggccccgcctccagcacagcagctcaccaatcagatg
agttccatgaacttgggcaactatgcaccaggtcccatgcagagcgcaccacatccaaca
agctctgtagcccagcagcctttccaaacttttcctcctccagcaatgggccagccacag
atgcctccaggcccgcagtcaccccacatgtcaccccacatgtccccccagatgtctcca
ccacagtcacccctagcaagcatgccaatggcaggcccaccgatggccggccctccaatg
gcaggcatgggtagacccttccccgggccgcctccttcaggccccggaggtttccagcag
cctggtcttggagctgctggtccagcaggatacccacagcaaggaggtcagtttggggga
cacatggctgggccccagccaggcatgccaggggccttccctggcgctccaggcggactg
gctggaccacctcagaagaaactggaccctgactctatccccagcataactcaagtcatc
gaggatgaccaagcaaaacgagggggacagatctacagcacaaacatcagaggacaggtt
ccacctctggtcaccactgacttcacagtacaggaccaaggcaatgccagtcccaggttc
atgcgctgcaccacctactccctaccctgcaccgctgatctggccaaacagtgccaagtg
cccctggcctccatcataaagccctttgccaatttgccaaagaatgagactcctctgtat
gttgtgaaccacggtgagacaggcccaatccgctgcaatcgatgcaaggcctacatgtgt
ccctacatgcagtttattgatggggggcgtcgctaccagtgtggtttctgcaactgtgtc
aatgaagtgccagtcttctatttccaacatcttgaccacatgggccggagggtggacttc
tatgagaggcccgagctgtccctgggatcatacgagtttgtagccaccatggattactgc
aggaacaacaagcctccgaatcctcctgcctacatctttatgattgatgtgtcctataac
aacattaaaagtggactggtcaaactgatatgtgatgagctgaagactctactggagaat
ctgcccagcgaggaaggtacggagagctctgccattaaggttggctttgtcacctacaac
aaggtcctccacttctacaacgtgaagagcgctttggcccagccccagatgatggtggtt
tcagacacagcggagatgtttgtcccgctgcttgatggcttcctcgtcaactatcaggac
tccaggactgtcatctacaacctcctggaccagatccctgatatgtttgcagacaccaac
gagagtgaaacggtctttgttcctgtcatccaggccggcatggaggcattcaaggcagca
gaatgcagcggaaagctcttcatcttccagtcctccatgcccacggctgaggctcctggc
aaactgaagaacagggatgacaaaaagctggtcaacactgagaaagagaaaaccctgttc
cagcctcagaaaggagtgtatgagcagctgtctaaggagtgtgtggctcagggctgctgc
gtggatctcttcctctttccaagccagtatatggacattgcaaccatggctgatgtgccc
tcgcacaccggtggctccgtctacaagtactgcaacttccaggtggagactgacggggag
cattttctgagagacctcagaaaagatgtgcagaaaagcatcggatttgatgccatcatg
cgtgttcgtaccagtacaggtttcagagccacagagttctttggtgccgtccatatgaac
aacaccacagatatagagatggcagctgtggattgtgataaggctgtgaccgtagagttc
aagcatgacgacgcgctcagtgaggagactggggcactcatgcagtgtgccttgctgtac
accaccgtcggtggacagcggcgtctccgcatccacaacctcagtctgaactgcagcttg
cagttgtctgagttgttcaagagctgtgagaccgactcactcatcaacttctttgccaaa
tcagcttgccgtgccatactgagccagcctctgaagaatgtgaaggaaatccttgtcaac
cagacggcccacatgctggcctgctacaggaagaactgtgccagcccctctgctgccagc
cagctgatcctgcctgatgccatgaaggtgtttccggtttacatgaacagccttatgaaa
actgcccctttggtcggcagcacagagctctccacagacgacagagcccatcaaaggctg
ttgatcatgggcatgggtgtggaggacacacagctgctgctctacccccgcctcacccca
ctgcacaacatggacgtaagcagtgaggctcatcctgctccagtgcgctgctcggaggag
cgtctgaccgactctggcatgttcctgctggagaacggccactccatgtttctgtggctg
ggccaagggatccctccagacctcatccagagcatcttcaacctgccctccctcgcccac
ctgcaaggacaaatgtgtgtgctgccagaactggacaacccgttgtcaaacaaggtccga
tccatcatcaacggtctgattgaaaacaggccgaattctatgaagctcaatatcgtgagg
cagaaggacaaaccagagatgttgttccgtcagttcctggtggaggataaaggcctgcac
gggggagcttcctacatggacttcctttgctacgttcaccgagaaatcaggcagctgctc
acctaa
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