Anoplopoma fimbria (sablefish): 129093563
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Entry
129093563 CDS
T09102
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
afb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129093563
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129093563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129093563
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129093563
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
129093563
NCBI-ProteinID:
XP_054457591
LinkDB
All DBs
Position
7:18269928..18402096
Genome browser
AA seq
2242 aa
AA seq
DB search
MCLLTQFTLLLWKNFTLRKRQKVRLVVEVVWPLFLFFILVWVRSTNKPLYKGQCHYPNKA
MPSAGVLPWFQGMMCNINNPCLNYPTPGETPGQVNNFNNSIIAGMLIELQTLLVNRSILS
KAQLLADDLNQWDSVLSQSNPGDAQPVILRSILRDDETFSTHLKQNLSLPPTVVQSLMNA
EIKLNPMMGIPRPGNLRSILCEGADLDEYIQFSSRAEKEAFQNVSCSRDPQQLINAQQVL
LQNLDARKVLSEAPSALDLNRTDTVSLTGKTIQDALPVIEEMARLQNSMIFKAASSLDFQ
RDMIGSINMLLCGKQLDISLRSTRQMDNNTSVSVTSNSSDAFCQTLLDTLEGTPGLRYIW
STFKPLLQGKVLYTPDTPAVRLMVKEANSTFNALAMLKELADLWDELGPRVWDFLQNSRQ
VNALRALLANPVSAAVLNQRLNGTEWTAEQLANFLYNGHPEDRPPGMPPYDWRNAYNATS
EILKLLSNFLGCLDLNKFEAAPTENHLVSRALELLKNDTFWAGVVFENLQLNSSQPPPYV
KYKIRMDIDDAERTSEVKDRSWSPGARDNSFNDLRYIWGGFSYLQDMMDHGIIRVQTSKT
QPLGVFAQQMPYPCFVDDRFFRFLASSLPLYMTLAWIYSVAMIVKGIVAEKEARLKETVR
IMGLRDSIYWLSWAVSSALPLAFSALLLSFILKYGKVLQYSDPSVIFVFLLVFCLATITQ
CFFISVFFSKANLAAACGGLIYFVLYLPHVLCYAWRDVMGFQAKVAVSLLSCVAFGYGCE
NFAKYEEQGVGIQWNNINKSPEEGERYTFIVSILMMLFDAAFYWVLTWYIENVFPGQYGI
PKPWYFPFTASYWCGTASTTDIDPGVLQNSTEHNDYLEKPSPNMKAGVSVRNLVKIYKTG
KKLAIDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGHDILTDMDSI
RKYLGMCPQHNVLFDDLTVEEHIYFYARLKGRSCGEVKIEMDQMIKDVGLSHKRKDLAKN
LSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMD
EADILGDRIAIISQGRMRCCGSSLFLKKRFGSGYYLTLVRDGTEKMAAQRDGIIHHQSKE
EEDCPSRNGSPDDGIGSQSWDNSDPSAYLTAVDQIVRRHVPEAVFLESIGQEITYILPYC
GARDGTFALLFQMLDQAMADLGLTSYGISDTTLEEIFLKVAEDSGVDAEIPTTKELLVRD
CKRGSRTSKRNSIASVHMKTEQVSGMSELKEKFTSKVEDVQRNASVSGRGSTVITGWELI
RRQFLALFIKRFHHARRSRKGLIAQVVLPAVFVCLSLIFSLILPPFTEYPSLELQPWMYD
LPQTTFYSNDGPDNVEVSKVVETLVNKPGFGIRCMNGDPIPKLPCSSSGSDWFTPSVDQS
VTDIFLNGNWSMSNPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRIQNTTDTLLDLTGRN
MTDFLVKTFERSGKTRYGGISVGGINSQVRLSEAEIEASFRDLTDLFSSFQDNVTDQIFQ
KAETLLKKLGTRDNLKVWFYNKAWHGMASFLGVANNAILRGNLPVGQDPSKYGISVSNHP
LNLTKQQLSYVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNP
AVYWLANFAWDMCNYIIPCLIVIVIFLCFQQKAYVSPPNLPALILLLILYGWSITPLMYP
ASFIFSVPSTAYVVLTCINLFIGINGSIATFVMELFDDDNVSRINDIVKNVLLIFPHFCL
GRGLIDMAKNQAMATLFSGFGEDRFEDPLSWEMVGKNLCAMSIQGAVMFTVTILIQYKFF
CKPRLISGKSLSAEEEDIDVARERKRLYEGKAQNDLLSIYDLTKVYSRKSAPAVDRLCVG
VPAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNMGYCPQFD
AIDELLTGREHVEFYARLRGVPEKEVTMVAEWGIRKLGLVKYSSKSAGTYSGGNKRKLST
AIALIGCPQVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMA
IMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQQSFLGSVLKEKHHNT
LQYHLPYTQGALANIFSQFTSNQQRLGVEDYSVSQTTLDQVFVNFARQQHGEEDSKAYDN
AVDTSDELPMKSVKTSQEAEKV
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgaagtggtatggcctctgtttctcttcttcatactggtg
tgggtgcggtccaccaataagcctctctataaaggccaatgccactacccaaataaagcc
atgccgtcggctggcgtgctgccatggtttcaaggtatgatgtgtaacatcaacaatccc
tgtttgaactatccaacgccgggggagacgccaggccaagtcaacaacttcaacaactcc
ataattgccgggatgttgatagagctgcaaaccctcctagtgaacagatccattctcagc
aaggcacagttgctggcagatgacctcaaccagtgggattcagtcctgtcgcagtctaac
cccggtgatgctcaaccagtgatcctaaggagtattctcagagacgatgaaactttctcc
actcacctgaaacagaatttgtcgctgccaccaacagtggtccaaagcctcatgaatgct
gagattaaactcaatccaatgatgggcatcccaaggccaggcaacctgaggagcatcctg
tgtgagggggcagatctggatgaatatatccaatttagcagccgagctgaaaaggaggct
tttcaaaatgtcagctgctcccgtgatccacaacagctgattaatgcccagcaagtgctc
ctgcagaacctggatgcgaggaaagtgctttctgaggcaccttcagctttggatctcaat
cgaacagacacagtctcactgacggggaaaaccattcaagatgcattaccagtgattgag
gagatggccagactgcagaactccatgatctttaaggccgcaagttctttggatttccaa
agggacatgattggcagtatcaatatgctactttgtggaaagcagcttgacatcagttta
cgctcaactagacagatggataacaacacgtctgtctctgttacgagcaacagttccgat
gctttttgtcagactcttctcgacaccctggagggcacacctggtctgcgctacatttgg
agcaccttcaagccgttactgcaagggaaagtcctctacacacctgatacacctgctgtt
cgcctcatggtgaaagaggcaaatagcacattcaatgccctggctatgctgaaagagctg
gctgatttgtgggatgaactcgggccacgtgtctgggattttcttcaaaacagccgtcaa
gtcaatgcattacgggctttgctggcaaatccagtgtctgctgctgtcctcaaccagcgt
ctgaacggcacggaatggacagcggagcaactggccaacttcctgtacaatgggcatcca
gaggatcgaccccccggcatgccgccctacgactggcgaaatgcttacaacgccacatcg
gaaatcctgaagcttctctccaacttccttggttgtttagacctgaacaagtttgaggca
gcccctaccgaaaaccatctggtgagcagagcgctggagcttctgaagaatgatacgttc
tgggctggcgttgtctttgaaaacctccagctgaactccagccaaccccctccatatgtc
aaatacaaaatccgcatggacattgatgatgcagagcgtaccagcgaagtgaaagacagg
tcatggtctcccggggctcgagacaactcctttaacgacctgcgctatatatggggaggc
ttctcctacctgcaggatatgatggaccatggtattatacgagtacaaacgtcaaagacc
caaccactcggtgtttttgcacagcaaatgccatacccctgcttcgtagatgacaggttc
ttccggtttctggcaagctccctccccttatacatgactttagcctggatctactcagtt
gccatgatcgttaagggcatcgtcgcagagaaagaggcgaggcttaaggagaccgtgagg
atcatgggcctcagagactccatctattggctgagctgggcagtgtccagcgcactgcca
ttggccttcagcgctcttctcctttcctttatactgaagtacggcaaagtgctgcaatac
agcgacccctcggtcatctttgtcttcctgctggtgttttgcctggccaccatcactcag
tgcttcttcattagcgtcttcttctcgaaggccaacttagcagcggcgtgcggtggcctc
atctactttgtcctctacctgccccacgtcctctgctacgcctggagggacgtcatgggt
tttcaggccaaggttgcagtgagtttgttgtcatgtgtggcctttggctatggctgtgag
aacttcgccaagtacgaggagcaaggcgtcggtattcagtggaacaacatcaacaagagt
ccagaagagggagaacgctacaccttcatcgtgtccatcctcatgatgctctttgatgct
gccttttactgggtgctcacctggtacattgagaatgtctttccaggccaatatggaatc
ccgaagccgtggtacttccctttcactgcatcttactggtgtgggacagcctcaacgact
gacattgaccccggcgtgctgcagaactccaccgaacataacgactatctggagaaacca
tcacccaatatgaaagcaggggtctcagtccgcaatctcgttaaaatctacaagaccgga
aagaagctcgccattgacggactgagtatggacttctacgagaatcagatcacatctttc
ctcggccacaatggagccggaaaaacaaccacaatgtcaattctgacaggactgttccca
cctacatcaggaacagctctcatcaacggacacgacatcctcactgacatggacagcatc
cgaaagtacttgggaatgtgcccacagcacaatgtcctgttcgatgacctgacagtggag
gagcatatctacttctacgccaggttgaaaggacgcagctgtggcgaggtgaaaattgag
atggaccagatgattaaggatgtcggtttatcgcataagaggaaggatctcgctaagaac
ctgtcaggtgggatgcagaggaagctgtccgtggctatagcgtttgttggcggctcaaaa
gtcgtcatcttagatgagcccacagcaggagtcgacccctatgcccgcaggggtatctgg
gaactgctgttaaaatacaaacaaggtcgcaccatcattttgtcaacacaccacatggat
gaggcagacatcttaggtgatcgcatcgccatcatctcccaaggcaggatgcgttgctgt
ggctcctcactcttcctaaagaagcgttttggcagcggctactacctcactctggtccga
gatgggacggagaagatggcagctcagcgtgatggtatcatacaccatcagtccaaagag
gaggaagactgtccttcgaggaacggcagcccggatgatggtatcggcagccagagctgg
gacaactctgatccctcagcatatttgacagctgtggatcaaattgtgcggcgccatgtc
cctgaggcggtcttcttggagagcatcggtcaggagatcacctacatactgccttactgt
ggagccagagatgggacctttgctttgctgtttcaaatgctcgaccaggccatggctgac
cttggcctgaccagctacggcatctctgacaccacgctggaggagatatttcttaaagtg
gcagaagatagtggagtggatgcagaaataccaacaacaaaggagctgttggtgagagac
tgcaaaagaggctcccgcacatccaagcggaacagcatcgccagcgtccacatgaaaaca
gagcaagtctctggaatgagtgagttaaaggaaaagttcacaagtaaagtggaagacgta
cagaggaacgccagtgtcagtgggaggggatccacggtcatcaccggatgggagctgatc
aggaggcagttcctggcgctttttatcaagcgctttcaccacgcccgaaggagccgcaag
ggactcattgcccaggtggtcctgcctgctgtttttgtgtgcctgtctctgatcttctcg
ctcatcttgccaccattcaccgaatatccgagtctggagctgcaaccctggatgtatgat
ttgcctcaaaccaccttttacagcaatgatgggccagataatgtggaggtgtctaaggtg
gtcgaaaccttggtgaacaagcctggctttgggattcgctgcatgaatggagacccaata
ccgaagttaccatgttcttccagtggctccgattggttcactccatccgtggatcagtcc
gtcactgacatcttcctcaacgggaactggagcatgtccaacccctccccctcctgtcag
tgcagcacgccaaagcgaaccatcatgttacctgactgtccacctggtgcaggggggctc
cctccacctcagaggattcagaacacaacagacacattgttggatctaactggacggaac
atgacagacttcttggtcaagacttttgaacgctcgggtaaaacaaggtacggaggcatc
tccgtcggaggcatcaactcccaagtccgtctgagcgaggcagaaatcgaagcttcattc
agggatctaacagacctattcagttcctttcaggataatgtgactgaccagatcttccag
aaggctgagacgctgctgaagaagctgggaaccagggacaacctaaaggtgtggttctac
aacaaggcatggcatggcatggcgtccttcctcggtgtggcaaacaacgccatcctgagg
ggaaatctgccggtcggacaggatcccagcaagtatggcatctctgtgtccaatcacccc
ctcaacctcaccaagcagcagctctcctacgtggccatggccacaacctcgactgacgtg
gtggtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtcctcttc
ctcatccaagagagggtgaacaaagccaagcatctgcaatttgtcagtggagtaaaccca
gccgtctactggctggccaattttgcctgggacatgtgtaactacatcatcccgtgcctg
attgtgattgtgatcttcctctgcttccaacaaaaagcctacgtttcacctcctaacctg
cctgctttgattctgctgcttattttgtatgggtggtccatcacccccttgatgtacccc
gcctccttcatcttcagcgtgcccagcacggcctacgtggtgctgacctgcatcaacctc
ttcatcggtattaacggcagcatcgcgacctttgtaatggagctctttgatgatgataat
gtctcccgcatcaatgacattgtgaagaacgtgctgctgatattcccccatttctgtctg
ggcagaggactaatcgacatggccaagaaccaggcaatggccaccctcttcagcggtttt
ggagaagaccgtttcgaggacccactcagctgggaaatggtgggaaagaacctttgcgcc
atgtccattcagggagctgtcatgtttaccgtcacaatcctcatccagtataagtttttt
tgcaaaccaaggctcatttcaggaaagtcattatctgcggaggaagaggatatcgatgtt
gctcgggaacgcaagcgcttgtatgaagggaaggcccagaacgaccttctgagcatctat
gacctcactaaggtatactctcggaagagcgcccctgctgtggacaggctatgtgtggga
gtacctgccgcagagtgttttggcttgctgggaatcaacggggctgggaaaaccaccacg
ttcaagatgctgacaggagacatcccagtctccggtggagaggccttcctaaatggatac
agcatacgaaccgaaatgagggacgtgcaccagaacatgggctattgtcctcagtttgat
gctattgatgaactgctgactggacgagagcatgtggagttttacgccaggttacgaggg
gtaccagaaaaagaggtcaccatggtggccgagtgggggatccggaaattggggctggtc
aaatattccagcaagtcggcaggaacctacagtggcgggaacaaacgcaaactttctaca
gcgatagccctgatcggttgtcctcaagtgattttcctggatgaaccaacaaccgggatg
gaccccaaagcccggcgcttcctgtgggactgcatcctgagcgtcatcaaagagggacga
tcagtcattctcacatcacacagtatggaggagtgtgaagcactgtgcacacgcatggcc
atcatggtcaatgggcgcttcaagtgcctcggaagcatccagcatctgaagagcagattt
ggtgatggctacactgtgattgtgagggttggtggctctcctcctgcgctgaagccagta
gaggacttcgtccagcagtccttcctgggcagcgtcctgaaggagaagcatcacaacaca
ctgcagtatcatctcccatacacacagggggctttggccaacatcttcagccagttcacc
agcaatcagcagaggctgggtgtggaggactactccgtgtcccagactacgctggatcag
gtctttgtgaactttgcgaggcaacagcacggggaagaggactctaaggcctatgacaac
gcagtggacacttcagatgagctgccaatgaagtcggtgaagacctcccaagaagcagag
aaggtgtaa
DBGET
integrated database retrieval system
