Anoplopoma fimbria (sablefish): 129093613
Help
Entry
129093613 CDS
T09102
Symbol
si:dkey-185m8.2
Name
(RefSeq) trichohyalin
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
129093613
NCBI-ProteinID:
XP_054457656
LinkDB
All DBs
Position
7:6204287..6211560
Genome browser
AA seq
2057 aa
AA seq
DB search
MDTTDEDSSPVIVTEGAYPVRCTEEVLLPFITDESQQAVMDPHLPPDSHSVPSVLPELRL
VLLGRKGAGKSAAGNTILGGVGGFESGKPTEECVKRRADVAGRKVTVVDTPGWEWYYPLN
STPNWVRRETLRSVSLCPSGPHAVLLVVRSCSSVTDDYISEIEEHLEPLGKGVWEHTMLL
FTRGDELGLGSMEQRILTSGPGLQKLLQKCGNRYHVVNNRSKGDGTQVRELIRKLEEMVE
GKKNGSSHLEMDNSVMVGLEADGKRRARERRKKQRQMEVQMQRTTIKAALTSDGLQASEL
DAHQSFSKSPRRLPEVRLVLLGERETGKSSAGNTILGSVGFFQAGAVTEECVRQQAEVGM
RLVTVVDTPGWEGGVAGSTPERVKREIVGSVALCPPGPHALLLTLRVDTLVRATHVKEHL
ELLGDGVWRHTILLFTHGDQLREGVDIEQHVQSGGKDLQGLLEKCRGRYHVISSVDGGGT
GNRGSSEVTELLQKVEKMAAMNRCEAFSGLVQEVRDLSRHRNQKFNQRLKDMGDKMLRQD
DELKNMREREMKRLRWFFDRKKKVKSPGKADVQREEEEEEDRRMGERKNDIGELEDRMKW
LTEDKEREIQDLSIENERISAALNQSRAERHEALLNLELKEREIEELKERIDEQQLKLLD
LERAVAESQHERKQREDTIKVKKQEWMSGVKRLEQNIELQKKEKVEWMEEVASLKAEMDE
TKRRHDDILERKEQEKNREMAEMEERLKKEMEIKLLEKDKEREEMREKASEEKQIALDNI
KQREKDMQKVEELKAQQKKEMERKMHEQETEIHDLKLQHQEEMAIKIFEMEEIMETIKVQ
HEKEIDQKLKDNIEDIERVKHQHDNEIKDAKEEKLREITELKKQFEKETEKHIQAKKREL
ADLEQKYLVKTEGKMLENEKEKEMIHLKYKTEMAQKMQEKEEEVEVLKQQHQQELARKMK
EMEELMEMSAVHQEEIDRTMKEKEDDVERVKQQYSDKIRDIEQERQREIKELKQQSAEEI
EKQLQERQREIRELEQKHAAQTEETLKEHKKEKEIMKENHEKDIFQKHQERDGLMEELKR
QHMNEIKEVMQESDKEKERLVMNLKQEMEQRLEEKEKETEEIKLTVREMKEKLQQKEEKE
IENLNLKHNMEQRLEEKERETEEIREHSKELEKQLRQTEEERERDQLNHKKQMEQKLQEK
ERVIEKCNQHIKDIEEILQRKDEERGEIILNQKKEAERRLQDREREMEEMKLELLNDTER
KVKEKEAEIESVKLQADSRERRWREEQREKDERGEKELNRLSEIIDEKTREIAKAQGLLA
DRDGEMDQAKNTSSNYLEEIEELKESIKNQTDSIIEIQQHHTEQERKKDAEIMEKLQEKD
EELRQRDRESEREIVQLRLTIEQTKYELKDLTDKMETEMTNMIQEYEKEITRRNESVESI
AKERDGARSTGEEVIEKYEESRRRVEELQEQNEKMRKETEHFKIKYEELKRESEEEVRKH
LRAYEEQVKSIEAEIQGILKERDVEVGGLKEENNKLQVEIERMKEGRGEAERQMNEMREC
VQKQSELRTKDEEFLKRENKVGEREQLLSRRGNELEAKERELVEKEVELEGKEEELSKWE
ASLEKQQKEQEETDKYEQEVSMRAQSVEKKEKELESLLRALEGRQKELNYHGQDLQEKVK
GLKDHGKELKDREYYLKNEEQELLSWKSELQMQNEHVNSTTQQLDEMGRDLALLKEELNN
KEKKLKVTLKKLGKWEQELKEREERLKKRVSGDVENGQYEVDDDERDCFHQTDAVESEED
DLHSMYREVSERREKGRGSKSDRGDEERVDQRMGTASSAAESNNCHLETLKEMETGEERE
GMRGGGGGEMSRQKDLERSKVIQDSTFLSASQGHRCSNLPGSGLRVVVLGESWSSSSPAG
ITILFGEAFKPDGSSFRSWRGQVAGRQLAVAEPLGLKWRHGPDPTDTTQRTSILDSVSWC
RPGPHVVLLLVPAFMTCTRKYRRAAEEHMGLLGEDIWRHTLVLFTWGETLGESAEQHILR
NGELAGLVERCGGGIMW
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atggacacgacagatgaggacagtagtccagtcatcgtcacggaaggtgcttatccggta
cggtgcactgaagaagtacttctacctttcatcacagatgagagtcagcaggccgtcatg
gacccacacctccctccggactcccacagcgtcccctcggtcctaccagagctcagactg
gtcctactgggcaggaaaggagcggggaagagcgcggcgggcaacaccatcctgggagga
gtgggaggcttcgagagcgggaagcccacagaggagtgcgtgaaaaggcgagccgatgtg
gcggggaggaaagtcacagtggtggacacgccgggttgggagtggtactacccgctcaac
agcactcccaactgggtgaggagagagactttacggagtgtgtcgctttgcccctctggg
ccccacgctgtgctcctggtggtgcgatcctgctcctcagtaacagacgactacatcagt
gagatagaggagcacctggagccgctgggaaaaggagtttgggagcacaccatgctgctg
ttcaccaggggagacgagctgggcctcgggtccatggagcaacggatcttgacgagcggc
ccgggactccagaaactcctccagaagtgcgggaacagataccatgtcgtgaataaccgg
agcaaaggagacgggacgcaggtcagagagctgataaggaagctggaggagatggtggag
gggaagaagaacggaagcagtcatctagagatggataatagcgtcatggtgggtctggaa
gcagacgggaagaggagagcgagggagaggaggaagaaacagaggcagatggaggtgcag
atgcagagaacgaccatcaaagctgcgctaacgagcgatggtcttcaggcttccgagttg
gacgcccaccagtcgttctccaagagtccccgacgtttacccgaggtcaggctggttctc
ctgggcgagcgtgagacaggaaagagctccgctgggaacaccatactgggcagtgtgggc
ttcttccaggccggggcggtaacagaggagtgcgtccgtcagcaggcagaggtgggcatg
cggctggtgacggtggtggacacaccgggctgggagggaggtgtagcgggttccacgcct
gagagggtgaagagggagattgtcggtagcgtggccttgtgtcctccggggccccacgcg
ctcctgctgactctgagggtggatacactggtgagggcaacacatgtgaaggaacatctg
gagcttctgggcgatggtgtgtggagacacacgatactgctgttcacacacggggatcag
cttcgagagggggtggatatcgagcagcacgtccagagtgggggcaaggacctccagggg
ctgctggagaagtgcaggggccggtaccacgtcatcagcagcgtagacggaggagggaca
ggaaaccgaggctccagtgaggtgacggagctcctgcagaaggtggaaaagatggcggca
atgaacaggtgtgaggctttctccggactggttcaggaggtcagggatctgagccggcac
aggaaccagaagttcaaccagcgcctgaaggatatgggggataaaatgcttcgtcaggat
gacgagttgaaaaacatgagagagagggagatgaaaagactccggtggttttttgacagg
aagaaaaaggtgaagtcacccggaaaggctgacgttcaaagggaagaagaggaggaggag
gacaggaggatgggcgagaggaagaatgacatcggagagctggaggacaggatgaaatgg
ctgacagaggataaagagagagaaatacaggatctgagcatagaaaacgagagaatcagc
gcagcactaaaccagagtcgagcagaaaggcacgaggcgcttctcaacctggagctaaaa
gagagagagattgaggaactgaaagaaagaattgacgagcagcaactgaagctgctcgac
cttgaacgtgccgttgcagaaagtcaacatgagagaaaacagagggaggataccattaaa
gtgaagaaacaagagtggatgagtggggttaagagattggaacaaaacattgagttgcag
aaaaaagagaaagtggagtggatggaagaagttgcttctttaaaagcagaaatggacgag
actaaaagacgccacgatgatattctcgagagaaaagaacaagaaaaaaacagggagatg
gcagagatggaagaaagactgaaaaaagagatggaaataaaactacttgaaaaagataaa
gagcgggaagaaatgagggagaaagcatcagaggagaagcagatagctctcgataatata
aaacaacgtgaaaaagatatgcagaaagttgaagagttaaaagcacaacagaagaaggag
atggagagaaaaatgcatgagcaagagactgagatacacgacctaaaactgcagcatcag
gaagagatggccatcaaaatctttgaaatggaagaaataatggagacaattaaagttcaa
cacgaaaaagaaattgatcagaagttgaaagacaatatagaagatatagaaagagtcaaa
caccagcatgacaatgaaataaaggatgcaaaagaagaaaaactcagagagattacagag
ctgaaaaagcagtttgaaaaagaaacagagaaacatattcaagcaaaaaagagggagtta
gcagatttagagcaaaagtatcttgtcaaaacagaaggaaaaatgctagaaaatgaaaaa
gagaaggaaatgattcatctcaaatacaaaacagaaatggctcagaagatgcaagagaaa
gaggaagaggttgaagtgttaaaacagcagcatcaacaagaactggcaagaaaaatgaaa
gaaatggaagaactaatggagatgagtgctgtacaccaggaagaaatagatagaacgatg
aaagagaaggaggacgatgtggaaagagtcaaacaacagtacagtgataaaataagggac
attgagcaagaaagacaaagagagataaaagagctgaaacagcagtctgcagaagaaatt
gagaaacaattgcaggaacgacaaagagagataagagagttggagcaaaagcatgctgcc
caaacagaagaaacgctaaaagaacataaaaaagagaaggaaattatgaaagaaaatcat
gagaaagacatttttcaaaaacatcaggagagagacggactaatggaggagttaaaacgt
cagcacatgaatgaaattaaagaagtaatgcaagaaagtgacaaggaaaaagaaaggctt
gttatgaatctcaagcaagagatggagcaaagactggaggaaaaggaaaaagaaacagag
gagataaaactgaccgtgagagagatgaaggaaaagctgcaacaaaaggaagagaaagaa
atagaaaatttgaatttaaagcacaacatggagcaaagactggaggaaaaagaaagagaa
acagaggagataagagaacattcaaaagaactggagaaacaactgcgacaaacagaggag
gaaagagaaagagatcaattaaatcacaagaaacagatggagcaaaaactccaagaaaag
gaaagagtgatagaaaaatgtaatcagcatataaaggacattgaggaaatcctgcagagg
aaagacgaagagagaggagaaattattctgaatcaaaagaaggaggcagagcggcgactg
caggacagagaacgagagatggaggagatgaaactagagcttttaaacgacacagagaga
aaagtaaaggagaaggaagccgagattgaaagtgttaaactacaggctgactccagggag
agaagatggcgggaagagcagagggaaaaggacgagagaggagaaaaagagttaaaccga
ctttcagaaatcattgacgagaaaacaagagaaattgcaaaagcacaaggtcttcttgca
gacagagacggtgagatggatcaggcaaaaaacacaagttcaaactacttagaagaaatt
gaagagctgaaagaaagcattaaaaaccaaacagacagtatcatcgagatacagcagcat
cacacggagcaggagaggaaaaaagatgctgaaattatggaaaaacttcaggagaaagat
gaagagctgaggcagagagacagagagagcgagagagagatcgtccaactgaggcttaca
atcgagcagacaaagtacgagctgaaggatctcactgacaagatggagacggagatgacg
aacatgatccaggaatacgaaaaggaaatcacgagaaggaacgagagcgtggaatccatc
gcaaaggagagggatggtgctagaagtacaggagaggaagtcatagagaaatacgaggaa
agtcggaggagagttgaggagctgcaggagcaaaatgagaagatgagaaaagagacggag
cacttcaaaataaagtacgaggagctgaagagggagagcgaagaggaagttaggaaacat
ctcagggcatatgaagagcaggtgaagagcatagaagcagaaatacaaggcattcttaaa
gagagagatgtggaggtcggagggttaaaggaggaaaataacaaattgcaagtggagata
gagaggatgaaagaggggcgaggtgaggcagagaggcaaatgaatgaaatgagagagtgt
gtacagaagcaaagtgagctcagaacgaaggatgaggagttcttgaaaagggaaaacaaa
gtaggagaaagggagcagctcctgagcagaagaggaaatgaacttgaagcaaaagagaga
gagctggttgaaaaggaggtagagttggaaggtaaggaagaggaacttagcaagtgggaa
gcaagtttggaaaagcaacaaaaagagcaggaggaaacagacaaatacgagcaggaggtg
agcatgagagcgcaaagtgtagagaaaaaggaaaaggagctagagagcttgctgagagct
ctggagggccgacagaaagagctaaattatcacggtcaagatctccaggagaaggtgaaa
gggctgaaagatcatgggaaggagctgaaggacagggagtactacttgaagaatgaagag
caggagctgctcagctggaagtcagagctgcagatgcaaaacgagcatgtgaactccacg
acgcagcagttggacgagatggggagagacctggctctactcaaggaagaactcaacaac
aaggagaagaagttaaaggtgacacttaagaaactgggcaaatgggaacaggagcttaaa
gaacgagaggaaaggttgaagaaaagagtgagtggagatgtggagaacggacagtatgag
gttgatgacgatgagagggattgtttccatcagacggatgctgttgagagcgaagaggac
gacttgcattcaatgtaccgagaggtcagtgagaggagggaaaagggaagaggaagcaag
tcagacagaggagacgaggaaagggtggatcagaggatgggaacagcatcgtcagccgca
gagagcaataactgtcaccttgaaacactaaaagagatggagacgggtgaggaaagggaa
gggatgagaggaggaggaggaggggagatgagcaggcaaaaagatctggagaggtcaaag
gtcattcaagattccacgtttttatcagcaagtcagggtcacagatgctcaaaccttcct
gggtcgggtttgagggtggtggtgctaggggagtcctggtcgtccagctcccccgccgga
atcaccatcctctttggggaggcgttcaaaccggacgggtcctcgttcaggtcctggaga
ggtcaggtcgccggacgccaactcgccgttgcagaaccactgggtctgaagtggcgacac
ggacccgatccgaccgacacgacgcagaggacgagcatcctcgacagcgtctcctggtgt
cgccctggaccgcatgtggtcctcctgctggtgccggccttcatgacctgcacacggaag
tacaggagggcggcggaggagcacatgggtttgcttggggaggacatttggcggcacacg
ctggtgctgttcacgtggggggaaacgttaggggagagcgcagagcagcacatcctgagg
aacggggagctggcggggctggtggagagatgtggggggggtatcatgtggtga
DBGET
integrated database retrieval system