Anoplopoma fimbria (sablefish): 129093615
Help
Entry
129093615 CDS
T09102
Symbol
arhgef40
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family G member 4B
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129093615 (arhgef40)
Membrane trafficking [BR:
afb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129093615 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
DHC_N2
KIAA1755_C
KANSL3_1st
IQ_SEC7_PH
PH
Motif
Other DBs
NCBI-GeneID:
129093615
NCBI-ProteinID:
XP_054457659
LinkDB
All DBs
Position
7
Genome browser
AA seq
1744 aa
AA seq
DB search
MGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRILRSNDFYLQVVPFSTRCPRLA
LKCLAPGGRTVQEVLVPESQHPLVFTTEWLHSVNKERGHKRELGGGLDTCLVSTCDGVVR
LPWKEVVYPKFIHDPSEELGLMSNHEGSTSKRLPSEGGSSLGGWGGSSSGELDSWSWDEE
EDDGLPPDGLDSAPALPXRRRSEDGLGRTSRHPQLDGDYVELLEPRLGPDGGVDTRQRYL
EMHGICKTKTLPLCRRSKAIKLRKGRAWGYGRLEGSGSFRAAKRDVVTPKGDILPHRPPP
GVPEPGKGRQSYSSSVHDSDEGDKTSRDSGGLESHRPYFDSLFKERRPGVGKERDSNSLT
QPVRDNHTGKDSESGDSFVQDVTNHKVGHVIEGHSDHGSHSDSVFEDTDKPLSGDSDTTT
PTSDAPERPFTGVLESGENTNIGSKTKNSSNSKLNEERDDGKTEDRVCPRGKEVKTAGFR
APRRKRKGKGAKRRARSGGRAHQKGSKLQGKAAQPSPTTCSTLTKQPVTEENQSEQRKQA
DEPDGVPPSTPGGKEDTRKSSAEKEAGSLPVCNGQSGTSLLNHSNEEAGSGETCQNVLNG
VPSKEPPLLRELDTELLQSGKLKLTGTVDRLGRALVVTETDASEESFSEEEMARVLACYY
RITRPAAKEKGLTVLMDSRRSPPSTLCFSALKLFQVLVPGGLGSVLVLVGEQQESLSHDV
EGAEIHMVRGTAVLQQHVDKQQLPKEMDGDFTHCHSDWLAFRLSLESLTEHCESAIALLG
EALQSMDSEPMPDNIKAVPQSIDKHRQLMASVLADPRLTEPQQRGGAWLAGLTNSATGLA
QKSPDCRAALAATSKLYDSVDDALHRLVRVSNQRGRDLEALGRLAGLVDKLEKCDKEIEQ
VQSQLEDYKDPPLSLSRLSLKQQKFKTFRETANELHSETLSVLSNLEGWCELDWAGLSAV
QIRLPPVREKLRDMSHCLSDCWTTLDNTQRLLSTLTEATQWCEVVFSTSSSSPSSTCPLA
SLPPIPPSRFQDARSLAIELGGGPLLDLWTQTVERYQRTVAQVKPRFLQTDRAQNQGQGR
PKTPSASSLWDLMGTEGEGDWGLGAGGGDGGMQSWGSLASLFRPQTCSTLKIGEEKGNKK
EGAGGGGAGGAGGGKFLQNLLNPAKKSPTEAPLPPKPPRRRHPSFDLQALLAPRRGTASP
KPAESPTGGPSRNSPMSWLGRRAVADPVIATSMAAAIPGWAAGGGGGGGGGGGGSGVLIR
GVEVSSKEVVDHTGSPRQHVLLGRTERETGTDRAGSTAQSKLYLLWCRMLSSERQYVAIL
KGVEETYLPLIELSDTPASIRGKADALFPNWASLSAFHSQNLLPAMEGALVQSLLQQDCF
SKYREQFLQYSHYIRNKPELDSPLVTQAVDFFKSKLPPAXPLSPLSFPHCLQAPTQRLEQ
YCEALEELGGINPASDSALSILRHAQRHGEDLRASDLIVGCPIPVLERGELVRHGELTVC
GGARRKRAGVRNVFLYQHAVVFTKQKSPGPGRTAYSYKHSIKTGEMGLTQSVGGEGVKFE
VWVRQAPRIRDCVTLQAKDREDKAAWTHDIAHLLWTHAINNTELCLKESLCMGISSKLLL
DATGTQGSELDSIYSLNDRVHSSCSDSSSVGSQKEGGSPASGRDPRRSSGSTSYSQSQSP
STAV
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggcgatggaggattgtgtgcagggggcgctctcgtcgctttaccctcct
ttcgagagcacagcaccacccctcctctcccaggtcttctcagtcctggagtcgacctac
caacacgacagtcttcgctacctcttggactacttcgttcctgccaagcacctcctgcac
aagctccagcagcacgcctgctctcagtacctgggctgcttgttccttcactccggctgg
cctctgtgtttaggcgagaaagtggtcgtacagctctccaccctggactggaggatcctg
cgcagtaatgacttctacctgcaggtggtgcccttctctacacgctgcccccggctggcc
ctaaaatgtctggcccccggggggcgcaccgttcaggaagtcctggtaccggagtcacag
cacccccttgttttcaccactgagtggctgcacagcgtgaacaaggaacggggccacaag
agagaacttggaggaggacttgacacctgcctggtcagtacatgtgacggtgtggttcga
cttccttggaaggaggtcgtctacccaaaattcatccacgacccttctgaggagctgggc
ctgatgtccaaccacgagggcagcacatccaaacgcctccccagtgaggggggcagcagc
ctcgggggctggggtggctcatcctccggggaactggactcctggtcctgggatgaggag
gaagacgatggtttaccaccagatggtttggactctgcgcctgcgcttcccnggcgaagg
cgcagcgaagacgggcttgggcggacatcgaggcaccctcagctggacggggactatgta
gagctgttggagcccagattgggtcctgatggaggggttgacacaaggcagaggtacctg
gagatgcatggaatttgtaagaccaagactttgcccctgtgcaggagaagtaaagccatc
aaactccggaaggggagggcttggggatatgggagactagaagggtcaggaagctttcga
gctgccaaaagggacgtagttaccccaaaaggtgacattttaccacatagacctccacca
ggtgtccctgaaccgggcaaagggaggcaatcttactcttcttctgtccacgactctgat
gaaggagataaaaccagcagagactctggaggcctggaaagccatcggccttatttcgat
agcctgttcaaagagaggaggcccggcgtgggcaaggagagagatagcaacagcctcacc
cagccggtcagagacaaccacacgggtaaagactcagagagcggcgatagttttgtccag
gacgtgactaaccacaaagtcgggcatgtcatagagggtcactcagatcacggatctcat
tcagactctgttttcgaggatacagataaaccactgagcggagacagtgacaccacaacc
ccaacatcagacgcaccagagagacccttcactggagttttagaaagcggagaaaatacc
aacattggatctaaaacgaaaaattcgtcgaactcaaagttgaacgaggaaagggatgac
ggaaagactgaggacagagtttgccccagaggaaaggaagttaaaactgcaggattcaga
gctccaaggaggaaaaggaagggaaagggggccaaacggagggctaggtctggtgggcgt
gcacaccaaaagggatcaaagctgcagggtaaagctgctcaaccaagtcccaccacctgc
tctactttgacaaagcagccagtcacagaggagaaccaatcggagcaaagaaaacaggcg
gacgaacctgacggagtgccaccttcaactccgggggggaaagaggacacaaggaaaagc
agcgcagagaaagaagccggatcgttgcctgtctgcaacggccaatcaggcacatcctta
cttaaccactctaatgaggaggcggggtcaggagagacatgtcagaacgtactaaatggt
gttccatctaaagagcctcccctgctgagggaactggacacagagcttctccagtcaggg
aagctaaagttgacaggtacagtggacaggctgggacgcgctctggtggtcacagagacg
gatgcatcagaggagagcttctctgaggaggagatggcccgggtcctggcctgctactac
agaatcactcggcctgcagctaaagaaaaaggtctcacagtgttaatggacagcagacgc
tctccgccctccaccctctgcttctctgctcttaaactgttccaggtgttggttcctggc
ggtcttggatctgttctggttttggtgggagagcagcaggagtccctttctcatgatgtg
gaaggagcagagatccacatggtgcgaggaacagcggtgcttcagcagcatgttgacaag
cagcagctgcccaaagagatggacggagacttcacacactgtcactcagactggctggcc
ttcagactaagcctcgagagtctgacggagcactgcgagagcgccatcgcacttctcgga
gaagcactgcagtctatggactctgagcccatgccagacaacatcaaggctgttccccag
agcatcgacaaacacagacagctcatggcgagcgtcctggccgacccacgcttgacggaa
ccacagcaaaggggcggggcgtggctggcgggactgaccaatagtgcaaccggactggca
cagaagtcaccagactgcagggctgctctcgccgcgacctctaaactctacgacagcgtg
gatgacgccctccaccggctcgtccgggtgtccaaccagagaggtcgcgacctggaggct
ctgggacgactagcggggctggtggacaaactggaaaagtgtgataaggagattgagcaa
gtccagtcacagcttgaagactacaaggaccctcctctgtctctcagcagactctcgctc
aaacagcagaaattcaagacgttcagagaaacagccaatgagctgcacagcgagactctg
tcagtgctcagcaatctggagggctggtgcgagctggactgggcgggcctgagcgccgtc
cagatccggcttcccccggtcagggagaagctgagagacatgtcccactgtctgtctgac
tgctggaccaccctggacaacacacagaggctgctgtccacgctgaccgaggccacccag
tggtgcgaggtggtgttctccacctcctcctcctccccctcttccacatgccccctcgcc
tccctccccccgatcccaccgtcccgtttccaggacgcccgttccttggccatagagctt
ggcggcgggcctctcctggatctctggacgcagactgtggagcgctaccagcggaccgtg
gcgcaggttaaaccgcggttcctccagacggacagggcccagaatcagggccaggggagg
cccaagacgccgtccgccagcagcctgtgggacctcatgggcacggagggagagggcgac
tgggggttgggagccggaggaggcgacggggggatgcagtcctgggggtccctggcgtcg
ctgttcagaccgcagacctgctccacactgaagataggagaggagaaggggaataagaag
gagggagcagggggaggaggagcgggtggagccggaggagggaagttcctgcagaacctt
ctgaatcccgcgaagaagagtcccacagaggccccgctccctcccaagccgcccaggagg
cgacacccgagctttgacctccaggctctcctggctccccgcagaggcacggcctccccg
aaacctgcagagtccccgaccggcgggccgagccgcaactcccccatgtcgtggctgggg
aggcgggctgtagctgacccggtgatcgccaccagcatggctgcagcgatcccaggatgg
gccgcaggaggaggtggaggaggaggaggaggaggaggaggaagtggggtgttaattcga
ggggtggaagtcagcagcaaggaggtggtggaccacacggggtcgccgcggcaacacgtg
ctgctcgggaggacggagagggagacggggacggatagggccgggtcaactgcacagagt
aagctctacctgctctggtgcaggatgctgagttcagagaggcagtatgtggccatcctg
aagggggtggaggagacgtacctccccctgattgagctctcggacaccccggcctccatc
agggggaaggcagacgccctcttccccaactgggccagcctcagtgccttccactcgcag
aacctgctcccggccatggagggcgctctcgtgcagagcttgctgcaacaggactgcttc
agcaaatatagggagcagtttctccagtactcccactacatcaggaacaaaccagagctg
gactctccgctggtcactcaggctgtcgacttctttaagtccaagcttcccccggccntc
cccctctcccccctgtccttccctcactgcctccaggctcccacccagaggctggagcag
tactgcgaggccctggaggagctgggagggataaaccccgcctctgactccgccctctcc
atcctgagacacgcccagaggcacggcgaggacctcagggccagcgacctcatcgtcgga
tgtccgatccccgtgttggagcgtggcgagctggtgcggcacggcgagctgacggtgtgc
gggggggccaggaggaagcgggcgggcgtgaggaacgttttcctctaccagcacgccgtc
gtcttcaccaaacagaagagccccggaccgggacgcacagcctacagctacaaacacagc
atcaagaccggtgagatgggtctgactcagagcgtgggcggggagggagtgaagtttgag
gtctgggtccgtcaggctcctcgaatcagagactgcgtcacgctgcaggccaaggacagg
gaggacaaggcggcctggactcacgacatcgcccatctgctgtggacgcacgccatcaac
aacacagagttgtgtctgaaggagtccctctgcatggggatttccagtaagctgctgctg
gacgcgacaggaactcaaggctcagaactggactccatctacagcctcaacgacagagtc
cacagtagctgctcagactcctcctctgtcggcagtcagaaggaggggggatccccggcg
tctgggagggaccccagaaggagctccggatcaacaagttactcccagagtcagtctccc
tctacagccgtgtaa
DBGET
integrated database retrieval system
