Anoplopoma fimbria (sablefish): 129093635
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Entry
129093635 CDS
T09102
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129093635 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129093635 (chrnb1)
Ion channels [BR:
afb04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129093635 (chrnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Baculo_ME53
Motif
Other DBs
NCBI-GeneID:
129093635
NCBI-ProteinID:
XP_054457683
LinkDB
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Position
7:complement(13813650..13835953)
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AA seq
494 aa
AA seq
DB search
MKSLDLVLLTCCLGSLCTLGGASEVEKALMKQLFIGYNLKVRPASSPEERVVVRVGMVLS
SFVGLNMKNEEMSVTVVMNLEWTDHRLSWKPKENDGIEVMRIPAGKVWLPDIVLINNNDG
VFDVALYVHVQAYSNGRVTWTPPALYCSSCGVKVTYFPFDWQNCTMQFRSYTYDFTEIDV
QYALDSKGKEIREIQLDESYTEGGEWIIVHKPCRKNMNDDLYEDMTFYLIIERKPLYYVL
NIILPCILITVIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVN
YIMFTMILVTFSVILSVVVLNLHHRSPNTHSMPMWVRKIFIHLLPPYLCMLRPKAETPLS
LETIPRREKKVYNISKVADEYFIRKPDSSILFPKPNRFHPEGMITDLRKFIDGPSSYLTL
PDELKSAIGAITYIAEALQAEKDYEALKEDWQYVAMVVDRMFLWIFVVFTTVGTLAIFAD
ASFNHTPTDPFKAP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcctggatctggtcctgctgacatgttgcttaggcagcctctgcacactggga
ggtgcgtcagaggtggagaaggctctgatgaagcagctctttattggctacaacctgaag
gtgcggccagcatccagccctgaagagagggtggtggttcgtgtgggtatggtcctttcc
tccttcgttggactgaacatgaaaaatgaagagatgagcgtcactgttgtcatgaatctg
gaatggacagaccatcggttgtcatggaaacccaaggagaacgatgggattgaggtgatg
cgtatccccgctgggaaggtttggctgcctgacatagtcctcataaataataatgacggg
gtgtttgatgtggcactctatgtccacgtccaggcttatagtaacggcagagtaacctgg
actccccctgctctctactgcagctcttgtggagttaaggtaacctatttcccgttcgac
tggcagaactgcaccatgcaattccgctcctacacgtacgactttacagagatcgatgtg
cagtatgcactggactcaaaaggcaaggagatcagagagatccaactggacgaatcttac
actgagggtggcgagtggataatagtccacaagccgtgcaggaaaaacatgaacgatgat
ctatacgaggacatgaccttctacctcatcatagagaggaagcccctgtactacgtcctc
aacatcatcctcccctgcatcctcatcaccgtcatcgccatctttaacttctacctgcca
cctgacgcaggagagaagatgggtttgtcaatcaacgtgttgctcaccctcactgtgttc
ctgctgctgctggcggataagatcccagagacctcactgggcgtcccgatcattgtcaac
tacatcatgttcaccatgatcctggtcacattctctgtcatcctcagcgtggtcgtccta
aacctgcaccaccgctcacccaacacccactcgatgcccatgtgggtccgtaagatcttc
atccacctgctgcctccttacctgtgcatgctaaggccaaaagcagagaccccgctgtcc
ctggagaccattccccgtcgagagaagaaggtgtacaacatcagcaaggtggcagatgaa
tacttcatccgcaagcccgactcctccatcttgttccctaagcccaacaggtttcatccg
gaggggatgattacagatctgagaaagttcattgacggccccagtagctacctcacactc
cctgacgagctcaagtcagccataggggccatcacatatatcgctgaggctctgcaggcc
gagaaggactacgaggctctgaaagaggactggcagtatgtggccatggtggtggaccgc
atgttcctctggatcttcgtcgtcttcaccactgtgggcaccttggccatctttgctgat
gctagcttcaaccacacacccaccgaccccttcaaagccccctga
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