Anoplopoma fimbria (sablefish): 129093690
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Entry
129093690 CDS
T09102
Symbol
cdon
Name
(RefSeq) cell adhesion molecule-related/down-regulated by oncogenes
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129093690 (cdon)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Adeno_E3_CR1
Fn3_VIN3
Y_Y_Y
Ig_6
C1-set
DUF7359
Motif
Other DBs
NCBI-GeneID:
129093690
NCBI-ProteinID:
XP_054457758
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All DBs
Position
1:complement(27097895..27129744)
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AA seq
1123 aa
AA seq
DB search
MDSGLRVLLSTVLCLSQSLLIGCSSQYPSFRSEPASLVQSRGSVARLLCLVSPPSAVVSW
RFRGHPLDRDTLPGVEIHEGSLTISSLKPSHVGVYQCVARLDHGPAIASRHARVAIADIS
EYEDGRRRSLSVQEGSSVLIECPLPHSVPPALPRLRVRGERIEVSTDDYLVLPSGNLQII
SVSDQHQGMYKCGAFNPVTGETVMQSHGTKLSVKHSDSPPSVRIVYPTAPMTVSVQQSQP
LTLECIVSGSPAPAAKWFKNGKEVTPGPSHQRQHNNLAFVAVTRSDKGSYACAAETKQGT
VTSANYTVNVLEPVSVAEGLTNQLVSPGSSTRFSCVATGNPSPNITWLFNADPITPSRRF
QISGSSLVITDVTPQDEGLFQCLLDNGIGSAQSCGILTTQSDSLLVSTAGVLLEASPSLH
PMQSDEGHERFLTEEEGDTVNLPADRRGDRPTPEAPIIISPPQTHKPDLYDLEWRAGRDG
GSQINAYFVKYRKVDEMGTVVGNWHTVRVPGSEKTLRLSELESSSLYEVLMVARSSAGEG
QPAMLTFRTGKEKSTTTNKNPSKPPVIVIPPKAPEDKTGNTHFGVVIHDRVPEAPDRPTI
SMATESSVYVTWIPRANGGSPITAFRVEYRRGRSAEWVVAADNISPLKLSVEVRNLEPGS
SYKFRVVAMNMYGESPHSIPSKPYQVPQASPPIADRPVVGPHISSTDAISDTQIMLRWTY
SPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGVKPWHMIGHLQPETSYDIKMQCFND
GGESEYSNVMICETKARQSPGSPSQHPITPPYPQPQEPTSPPGGLLYLIVGCILGVMVLI
LLAFIAMCLWRNRQQNNMHKYDPPGYMYQPAEMNGHVLEYTTLPGTSRINGGVHGGYGHS
GPMLPQGCHHIHHKLPNGLALLNGSGSLFSAGHPHGHDGTLPHSTRDCEHSHPHHHHNGG
GMYTALPQTESSDCMSCQNLCNNNRCYNKTNGTFSSGTLPVMHRVAPCQQDGLEMVPLGQ
VSSQCHGPDSHMHSGDQEADTGCQPDEHRESSPSQHSCCLVGNNENCPADNTAEEELECM
DMEGPVVCWESLGLPDLDCDEKPGWISSNSLAGELIQPSPQEV
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctaagggtcctcctgtccactgtgctgtgtctcagccagtccctcctt
atcggctgctcatctcaatatccctctttccgttctgagcctgcctccttggttcagagt
cgaggctctgttgctcgtctgctctgcttagtgagtcctccatcagcggtggtttcctgg
cgcttcagaggccatcccctggaccgggacaccctgcctggcgtggagatccacgagggc
tccctcaccatctcctcccttaagcccagccacgtgggcgtctatcagtgtgtggcacgc
ttagaccatgggccggccatcgccagccgccacgctcgtgtggccatagcagatatatca
gaatatgaagatggccgacggcggtcattgtcagtgcaggaaggcagctcagttcttata
gagtgtcctctaccgcacagcgtccctccagcccttcctagactaagagtacgaggggag
cggatagaagtgtcaacagatgactatttagtgcttccgtcaggaaacctccagattatc
tctgtttcagaccagcaccagggcatgtataaatgtggtgcattcaaccctgttactggg
gaaaccgtcatgcagtctcatggaaccaagctgtcagtgaaacattcggattctcccccc
tcagtgcggatagtttacccaaccgccccaatgactgtttcggtgcagcagtcacagccg
ctgacgctggagtgcatcgtgtctggtagtcctgctccagcagccaaatggtttaagaac
ggtaaggaggtcacaccggggccttctcaccaacgacagcacaacaacctggcctttgtt
gcggtgaccaggagtgataaagggagttacgcctgtgctgctgagaccaagcaggggact
gtgaccagcgctaactatactgtgaatgttcttgagcctgtgtctgtcgcggagggcctg
accaaccagcttgtctctcctggctcctccactcgttttagctgcgtagcgacaggaaac
ccttctccaaacatcacctggctgttcaacgctgaccccatcaccccatcgcgccgcttt
cagatctctggatcatctcttgttattacggacgtgacaccacaggatgagggcttgttt
caatgtctgctggacaacgggattggctcggcacagtcatgtggaatccttacgacacaa
tcagattcactgcttgtctccactgctggtgtgctgctggaggcttcaccgtcgctccat
cccatgcagagcgacgagggccacgagcgcttcctgaccgaggaagaaggcgacacagtc
aacctgccagctgacaggaggggcgaccgtcctactccggaggcgccgatcatcatcagc
ccgcctcagactcacaaacccgatttgtacgacctggagtggagggcggggcgggatgga
ggcagtcaaatcaacgcctattttgtgaaataccgtaaagtcgatgaaatgggaacagtg
gtggggaactggcatacagtccgtgtccctggcagtgagaagaccctgcggctgtcagag
ctagagtcctccagtctctacgaggtgctgatggtcgctcgaagttcagcaggcgagggc
cagccagccatgctcaccttccgcaccggcaaggagaagagcaccacgaccaacaagaat
ccgtccaagcctcctgtcatcgtgatcccccctaaagctccagaggacaaaaccggcaac
acacactttggtgtcgtcatacacgacagagtacccgaggcccccgaccgccccaccatc
tccatggcgactgaaagttcggtgtatgtcacctggatcccgagagccaatggcgggtct
ccaatcacagctttccgtgtggagtacagacggggccgcagtgcagagtgggttgtggct
gcagataacatctcacctctcaagctgtctgtggaagttcgcaatctggagcctggttcc
tcctacaagtttcgagttgtagccatgaacatgtatggcgagagtcctcacagcattccc
tcgaagccgtaccaggtgccacaagccagcccgcctatcgcagaccgtcctgtggtcgga
cctcacatctcatctacagacgccatcagtgatacacagatcatgctgcgctggacttat
agcccctcgagtaacaacaacactccaatccaaggcttctacatttactaccggcccaca
gacagcgacaatgacagcgactacaaaagagatgtggtcgaaggtgtaaaaccctggcac
atgattggacatctccagcctgagacctcctatgatatcaagatgcagtgctttaatgat
gggggagagagcgaatacagcaacgtcatgatctgtgagaccaaagcacgtcagtccccg
gggtcgcccagccagcaccccatcacccccccttacccccaaccgcaggagcctaccagt
ccacctggaggactcctgtacctgattgtgggttgcattttgggagtgatggtgcttatc
ctgctggctttcattgccatgtgtctgtggaggaatcgtcagcagaacaacatgcacaag
tacgacccgcccggctacatgtaccagccagcagagatgaatggccatgtcctcgagtac
accactctgcctggcaccagccgcatcaatgggggcgtccacggtggctacgggcacagt
ggtcccatgttaccccaagggtgccatcacatccaccacaaactccccaacggcttggcg
ttgctcaacggctccggcagcctgttctcagctggccacccacacggccacgatggcacc
ctgccccacagcacccgcgactgcgagcactcgcacccccaccaccaccataacggtgga
ggcatgtacacagctcttccccaaacagagtcgtctgattgtatgagctgtcagaacctc
tgcaacaacaacagatgttacaacaagaccaacggcactttctccagcggcactctgcct
gtaatgcatcgcgtggcgccatgccagcaagacggtctggagatggtgcctctgggccag
gtttcgtcgcagtgccacggccccgacagccacatgcactctggtgaccaggaagcggac
acagggtgccagccagacgagcacagggagtcctcgccctcacagcattcctgctgtctg
gttgggaacaatgaaaactgtccagcagacaacactgctgaggaggagctggagtgcatg
gacatggaggggcctgtggtgtgctgggagagtcttggcctgccagacttggactgtgac
gaaaagcctgggtggatctccagcaacagcctggcaggcgagctgatccaacccagccca
caggaggtctga
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