Anoplopoma fimbria (sablefish): 129093750
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Entry
129093750 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129093750
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
129093750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_NWD2_C
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
NPHP3_N
AAA_16
PQQ_2
AAA_22
Beta-prop_TEP1_2nd
AAA
AAA_28
Beta-prop_WDR19_1st
NACHT
NPHP3
Motif
Other DBs
NCBI-GeneID:
129093750
NCBI-ProteinID:
XP_054457840
LinkDB
All DBs
Position
7:complement(20067627..20112161)
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AA seq
1743 aa
AA seq
DB search
MKRLNPRWKTPPXWPSGVGSRQPCPRESALRKAAISGNITALPQHVPTGRSVRVFICANP
DDTEAERNALKEHVYPKLRDFCRENYGIEFQVVDLYWGADPEEWDSPDLQRLRMKLLEEC
LKTSAGPCFVGLVGEKYGSIRVPGEVESAEFEMILDAAVEAGLDTHILEEWYCRDENSVP
PAYYLKPKAQMLKNYQNSMESSSAAKTKNDKAWRNVSEEIKRIFRTSVLQLQEKGTMKSE
QAKKFLCSALEDELDFALGKQTPAFLRKCVCYIRKIANFDRFAKIPEMTRYMDIVVGGDR
VMRNQEAYERLLKVRDEFIPTVVAASNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQFY
EDMVDIIQATVQQNFGTEADPMYDEILQHLSLCKSYAELYQFKTESLDYVQEYLLPSKGS
RMSPLVVYGGPCTGKTLLLSEVAKQAYTWLQKEMGPETDPVVIVRFIGSSLLSTDLRTLL
QSICEQIAINYRCLIHFLPNKIQEMKELLINLLGESSFNRPLVIVLDALEQLSDADEVRK
LWWLPIHLPRTVRIVVSTLPNKHGILQKLRQLIHDEGYYVELIQRDRKVCSQTLKQQLLG
VKRKVTSGQQIYVNEALAKCTLPMFVNLIYREVIHWRSHKDVDDRSLCSTVHESIEQLFY
SVENKLGQRFVFRALGYITMAKAGLTEVELEDILSLDNIVLGDVIVATYLKNPLRISYDL
VARLKEELDGYLVERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGAW
SGGRKKIFTYDNNHFTSLNISHHKNPHQQQSHEKTSSDKYSYDRQTPEQPWVFQCNLLEP
DIFFVNHRKMTELVYHLTRSGRTDDLMFGVIMNFSWLYTMIKIGQFEKALTDIDLAYSYT
QEKELKFLATTLRSIKVKVLKNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYCS
IVPLHSSMDVTYSPERLPLCSSYMQIVEILPTLAPNIVLVALEDGSVSTWDVESRQLQRQ
IDTARSVVLGIRLTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEIKGSKQGGVTGGVAFI
NGFTLSTHHALAWLEASKDVNVIDLLYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLNT
ATIFHLGNGDKLSTVTSEFSGGFVKSILVLDTLSQMVMVDNEGSLSVWNTKEITNPRLME
DYDCRGDDSEVVGIELSEDQRSILICKARSIEVLDTKVWKMVEKFKAKRTERFVAAVLSK
NGQSIVASMENTSSIFVWRRDSGQCMASLIEISGAIVKLIKSAHHNLLLSVASSGVLSVW
DIDIITAMSNIDKTGKKIQTLQLSGREDYVFTMDGSEAVHKWNFSTGFIETVFKHEGIVE
NCVLTSSGDLMVTSDDKSSQYIWQTTTGENIFRINGQRISQLLITHNDQFVVSLCEQNAS
RVWRLGTGHKVCNILVTLQSALITTANTFLVGTSKNKLLAVSLWSGSVSKKFVCDDGISI
VNFKLIPDCPDCVVFITSTETVIIWSVADESVCRRVQLPTNFLKNLEDFQISPNGKVGIV
SKGDENINVLDLHSGKLRLVHATGIIWRQKLSRDGRYLVYVCFRSCDEDDDAGVVSSLIV
MRLADGKSIGTCSLYKTPTFLSLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATSN
SRQIVNNASXKVRPKCGNHSFKTVSDCIWRESTEVFSRDSPINVSDSGEGESTTPTKKTE
LLQ
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattgaatccacgctggaagacgcccccantgtggccctcgggagtggggagc
aggcagccctgcccgcgggaatcggcgctgcgcaaggcggccatcagcggcaacatcacc
gcgctgccgcaacacgtccccaccggccgcagcgtcagggtcttcatctgcgccaacccc
gacgacacagaggcggagaggaacgcactaaaagagcacgtctaccccaaactacgggac
ttctgcagggagaactatgggattgaattccaggtggtggacctgtactggggcgcggac
ccagaggagtgggacagtccagatctacagagactcaggatgaagctcctggaggaatgt
ctaaagacctcagcgggaccatgttttgttggtctggtgggagaaaagtacggcagcatt
cgagtgccgggggaggtggaatcagcggagtttgagatgatcttggatgcagctgtggag
gcggggctggacacacacatcttggaagagtggtactgtagggatgaaaactctgtgcca
cccgcatactacctcaaacccaaagcccaaatgctcaagaactaccagaactctatggag
tcaagcagcgcagccaagaccaagaatgacaaggcctggaggaatgtgtcggaggagatc
aagaggatcttcagaacatcggtgctgcagcttcaggagaaggggaccatgaagagcgaa
caggccaagaaattcctttgctctgccttggaggatgaattagactttgcccttgggaaa
caaactcctgcctttctcaggaaatgcgtctgctacattcgcaagatcgccaacttcgac
cgcttcgccaaaatccctgagatgacccgatacatggacatcgtggtcggcggcgaccgc
gtcatgcgcaaccaggaagcctacgagcgcctcctgaaggtgcgggacgaattcatcccc
acggtcgtcgctgcctccaacctccgtgtctattcctccgtcacccactgcgacatgaag
ttgggctactcccaagaagtggagagccactatgtagagggtctgtgtaaacagttctac
gaggacatggtggatatcattcaggccacggtgcagcagaactttggcacggaggccgac
ccgatgtacgatgagatcctgcagcacctgtcgctctgcaaaagctacgcagaactctac
cagttcaagaccgagtcgttggattacgtgcaggagtatcttctgccgtccaaggggagc
agaatgagccccctggtggtgtacgggggaccctgcactgggaagactctgctgctgtct
gaggtggccaaacaggcctacacatggctgcagaaagagatgggccctgaaaccgaccca
gtggttattgtccgttttattggctccagcctgctctccacagacctacgcaccctcctc
cagagcatttgtgaacagatcgcaataaactaccgctgcctgattcactttttgcctaac
aagatccaggagatgaaggagctcctgatcaaccttctaggggaatcttcattcaaccgg
cctttggtcatcgtcctggatgccctggagcaactctcagatgctgacgaagttcgcaag
ctgtggtggctccccatacatctgcctcggacagtccgcattgtagtctcgacgttgccc
aataaacatgggatcctgcagaagctccgacagctcatccatgatgaggggtattatgtg
gaattaatccagagggaccgcaaggtctgcagccaaacattaaaacagcagctgctgggg
gtgaagagaaaggtcacctcaggccaacagatctatgtcaacgaggcacttgccaagtgt
acattgccaatgtttgtcaacctcatctacagagaagtaattcattggaggtcccacaaa
gatgtggacgacaggtccctgtgctccacagtgcatgaaagcatagaacagctcttctac
tcagtggagaacaagttgggccaacgatttgtcttccgagcattaggttatatcaccatg
gccaaggctgggctaactgaggtcgagctggaagatattctgtcccttgataatatagtt
cttggggatgtcattgtggcgacttacctcaaaaaccccttgaggatctcatatgatttg
gttgccaggcttaaagaggagctggatggctatctggtggaacgtcaggtacgtaacgtc
accttgatggtttgggccaacagacacctgcatctcatcgcccagaagttgtatctcagc
aacgaggaggacgtccatcaaatgcacagcctcctagctgagtacttcctgggggcgtgg
tcaggaggcaggaagaagatcttcacttacgataacaaccatttcacttccctgaacatt
tctcatcacaaaaacccccaccagcagcagtcccatgagaaaacgtcctctgacaagtac
tcctatgacagacagactccagagcagccttgggtgttccagtgcaaccttttggagcct
gacattttctttgtcaaccataggaagatgacagaactggtgtaccaccttaccaggagt
gggcgcaccgatgatctcatgtttggtgtaatcatgaacttcagctggctctacacaatg
atcaagattggccagtttgaaaaggctttaacagacattgacttagcttacagctacacc
caagagaaagaactaaagttcctggccaccactctccgtagcatcaaggtcaaagtgctg
aagaacccagcatcactgtctgcagaactgcagcaaaggcttctgccagttgtcacctcc
ctccccaagctcagacatttacttcttgagtgtgacaaagatggcccaaagtactgctcc
attgtgcctctccactcctctatggatgtcacctacagtccagagaggcttcctctgtgc
tctagctacatgcagattgtggagatcttgcccactctagccccaaacatagtccttgta
gccctcgaagatgggtctgtcagcacctgggatgtagagagcagacaacttcaaagacag
atcgacacagccagatccgttgtgcttggaatcaggctaaccactgatgaaaagtatctg
gtcgtggctacaaccaaaaacacgttgctcatctatgataatcacaagtcctgcctttta
tctgaggttgaaatcaaggggtccaagcagggtggtgtcactggtggggtggccttcatc
aatggttttactttgtccacccaccatgctttggcttggcttgaggctagtaaagacgtc
aacgtcattgacctgctctacggttggcctctctaccagtttcactgctggtatgaggtg
acttgtgtccagtgctctccagatggaatgtacgccttctgtggtcagtacctcaacact
gcaaccatctttcatctgggaaatggggacaagttgtccactgtgacctctgagttttct
gggggattcgtaaagtccattctagttctggacaccctaagccaaatggtgatggttgac
aatgaaggcagtttgtcagtatggaacaccaaagagatcaccaacccacgtctgatggag
gattacgattgtagaggggatgacagcgaagtggtgggcattgagttatctgaagaccag
cgctccattctcatttgcaaggccagaagtatcgaggttctggacacgaaagtatggaag
atggtagagaagttcaaagccaaacgcactgaacgctttgtggctgctgttctctccaag
aatggacaaagcattgtggcctccatggagaacacctcctccatctttgtctggaggagg
gacagtggacagtgcatggctagcctgattgagatctcaggggccatcgtcaaactcatt
aaatcagcccaccacaacctgctcctttctgttgccagcagtggagtgctgtctgtgtgg
gacattgatatcatcaccgccatgtctaacattgacaagacaggcaagaagatccagacc
ctgcagctgtccggcagagaggattatgtgtttaccatggacggttcagaagctgtccac
aagtggaacttcagcaccggcttcattgagacagtcttcaagcatgagggcatagtggag
aactgtgtcctaacctcctcaggtgatctcatggtcacatcagatgacaagtccagtcag
tacatctggcaaaccaccaccggagaaaacatctttcgcatcaacggacagagaatatca
cagctgctaatcacccacaacgaccaatttgtggtgtccctctgcgagcagaacgcctcc
agagtctggagactcgggactggacacaaagtgtgcaacattttggtcaccctccagagt
gcactgatcaccacagcaaacactttcctcgtgggaacctccaaaaacaagctcctcgct
gtcagcctgtggtcaggcagcgtatccaagaagtttgtctgcgatgacggcatttccatt
gtcaacttcaagctcattccggactgccctgactgtgtggtgttcatcacatccacagag
accgtcatcatctggagtgtggcagatgagtcagtctgcaggagagtccagctgccaacc
aatttcctcaaaaatctagaggacttccagatctcgcccaatgggaaagtaggaattgtc
tccaaaggtgatgagaatattaacgtcctggatcttcacagtgggaagctgaggctcgtc
cacgctaccggtataatatggcgtcagaaattatcaagagacggacgttatctggtgtat
gtctgtttccggagctgtgatgaggacgatgacgccggcgttgtgtccagtctgatcgtg
atgcgccttgctgacggtaagagcatcggcacatgctccctatacaagacacccaccttc
ctgtccctctctcagcgggcgctaaacatcatcattggcttcgaggacggcagcatcgga
acatacacagtagtggatcgcgtagatgctgccctcaagataaagatagccacctccaac
agccgacagattgtcaacaatgcctcgncaaaggtgcggcccaaatgcgggaaccattcc
ttcaagaccgtttccgactgcatttggagggagtccacagaggtgttctccagggacagc
cctatcaacgtgtccgactctggtgagggtgagtcgaccacacctacaaaaaagactgaa
ttgctgcagtga
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