Anoplopoma fimbria (sablefish): 129093775
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Entry
129093775 CDS
T09102
Symbol
zmp:0000000529
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129093775 (zmp:0000000529)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
129093775 (zmp:0000000529)
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
PD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
129093775
NCBI-ProteinID:
XP_054457872
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All DBs
Position
1:29184851..29191418
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AA seq
697 aa
AA seq
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MAGDGGALKDANEIKSQFRTREGFYKLLTLSDSQQRAGLPRGPAAGGXGAGPGAAPGGGA
GGVGLLQGPGAAAAAAAGAAAAAAAAAAASSSSSSSSSAAASSSSSPAGFLPPVRVSMVK
LQPEDPGEESERVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHDFNQYSAT
AESVALIVGFSAGQVQYLDPIKKETSKLFNEERLIDKSKVTCLKWLPKSENLFLASHASG
HLYLYNVDHPCGTAAPQYSLLRQGEGFAVYACKTKTPRNPLLRWAVGDGGLNEFAFSPDG
VHVACVGQDGCLRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLVTVWSFA
ESRVVARGHGHKSWVNVVAFDPFTTSLEDEEPMELSGSEEDLHQGAPNNSMHFGRVRTSS
TLSRLSRHSSKGGGSASVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRAFTNTFGPSLS
NSGSGAVNSTSVVSGSGTVEGHHHPPNTNTGAANPPTLPLPLPRSLSRSNSLPHPAVANA
SKGQGATEGSGGSGVGGGSAVGGNSTPFSIGRFATLSLQERKSDKSGCSSGVEKEHKRYH
SLGNISKSNDKINVAPRSNRLDAAKVLGTTLCPRMYEVPLLEPLVCKKIAHERLTVLVFM
DDCIITACQEGLICTWARPGKANLTAQNGNSPSGTVV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggccggagacggaggcgctctgaaggatgccaacgagatcaaatcccagttccggacc
agagagggtttctacaagctgctcaccctgtccgactcccagcagcgggccgggctgccg
cggggcccggcggccggtggcnncggagccggacccggggcggcaccgggaggaggggcc
ggaggggtcgggctgctgcagggccccggggccgccgctgctgctgccgccggggcagca
gcagcagcagcagcagcagcagcggcctcctcctcctcctcctcctcctccagcgccgcg
gcctcctcctcctcctctcctgcgggcttcctgccgccggtgcgggtctctatggtgaag
ctgcagcccgaagacccgggagaggagtcggagcgggtctgcttcaacatcggcagggag
ctttatttctacacctacaccaacatcaagaaggctgtagacctcagcaagccgatcgac
aagaggatctacaaggggactcagccgacatgtcacgacttcaaccagtactccgccacg
gcggagagtgttgccctcatcgtgggtttctcggccggacaggtccagtacctcgacccc
atcaagaaggaaaccagtaaactcttcaatgaggagaggttgatagacaaatccaaggtg
acgtgtctaaaatggctccccaagtccgaaaacctgttcctggcctcccacgccagcggc
cacctctacctctacaacgtggaccacccgtgtggcaccgcggccccgcagtactctctt
ctgcgacagggagagggcttcgctgtatacgcctgcaagacaaagacgccgcgcaaccca
ttgttgcggtgggccgtgggcgatggaggcctcaacgagttcgccttctccccggacggc
gtgcacgtggcgtgcgtgggccaggacggctgcctgcgcgtcttccactttgactcgatg
gagcttcagggggtgatgaagagctacttcggcgggctgttgtgcgtttcttggagcccc
gacggtaagtatctcgccacgggcggagaggacgacctggttaccgtctggtcgtttgcg
gagagccgcgtcgtcgcaagaggtcacggtcacaagtcctgggtgaacgtggtggcgttc
gaccccttcacgacttcccttgaagacgaggagcctatggagctaagcggcagcgaggag
gacctccaccagggggcgccaaataactccatgcactttggccgggtccgaacgagcagc
acgttgtcgcgtctttctaggcacagctctaaaggtggcggttcagcgtcggtcacgtac
cggtttggctcggtggggcaggacacccagttctgtctgtgggacttgacggatgacgtg
ttatacccacgcctgccgctgtcccgcgcctttactaacacttttggaccatcgctgtcc
aactctggcagcggggcggtaaatagcacttcagttgtgagtggaagtggaacagtcgag
gggcaccaccacccgcctaacaccaacaccggcgccgcaaacccaccaacgctcccctta
ccgcttcctcgctccctctcccgctccaactctctgccccaccctgctgtggcgaacgcc
tcaaagggccaaggcgccacggagggcagcgggggaagcggagtgggtggagggagtgca
gttggggggaacagcacaccgttcagcatcggccgcttcgccaccctgtcgctccaggag
cgaaagtcagacaagtccggctgcagcagtggggtggagaaggagcataagaggtaccac
agtctgggcaacatcagcaagagcaatgacaagatcaacgtggcgccaaggagcaaccgg
ctggacgccgccaaggtcctgggcaccacgctgtgcccgcgcatgtacgaggtgcctttg
ctggagccgctggtgtgcaaaaagattgcacatgagaggctgactgtcctggtgttcatg
gacgactgcatcattacagcctgccaagagggtctcatatgcacctgggcgcgaccgggg
aaggcgaacctgacagcacagaacgggaactctccgagcggcacggtggtatag
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