Anoplopoma fimbria (sablefish): 129093799
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Entry
129093799 CDS
T09102
Symbol
cnga1b
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129093799 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129093799 (cnga1b)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129093799 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
EMC3_TMCO1
Borrelia_P83
DUF6474
MDM10
Ion_trans_2
Sec62
RR_TM4-6
GmrSD_N
Motif
Other DBs
NCBI-GeneID:
129093799
NCBI-ProteinID:
XP_054457897
LinkDB
All DBs
Position
7:complement(685237..691823)
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AA seq
675 aa
AA seq
DB search
MAKVTPTVPSPIYRLTPPTIVLQDMEEEPGDRTNQRAGPGVLFNVNNSNNNEEEEEKKKK
KKEKKERKEKKEKEKQEKKERKEKKQKEKEEKEKEKEKEKEKEKEKKAKEEAPKEIEVID
PAGNTYYHWLAVITIPVMYNWTLIIARACFEELQTDYLGLWFFVDFVCDLTYIADMIFRT
RTGYLEQGLLVKDEQKLRERYKNSFQFKLDLVSMIPTDLLFLVVGVKYPEIRLNKLLRFN
RMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSVSKAIGFGSDRFVYPDPAD
PEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYLFVVTDFLVGVLIFATIVGNVGSM
ITNMNAARANFQARIDAIKQYMTFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVLKYLPD
KLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYII
KEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSKD
DLMEALTEYPDAKALLEEKGKQILMKDGLLDLELAAQGPDPKEIEEKVDRMTSALDTLQT
RYARLLAEHEATHSKLKHRVNRLERKLAPPRLEKKKKQKKKKLGXNQEEQEREVFRGVTK
KRFTSRHRFISAFQS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgactccaacggtcccgtcccccatctacaggttgactccgcccaccatc
gttctacaggacatggaggaggagccaggtgacagaaccaatcagagagccggacctgga
gttctgtttaacgtcaacaacagcaacaacaatgaagaagaggaggagaagaagaaaaag
aagaaagagaagaaagagagaaaagagaagaaggagaaggagaagcaggagaaaaaggag
aggaaggagaagaaacagaaggagaaggaggagaaggaaaaggagaaagagaaggagaag
gaaaaggagaaagagaagaaggccaaagaggaggctcccaaggagatcgaagtgattgat
ccggcgggtaacacctactaccactggctggctgtcatcaccatccccgtcatgtacaac
tggaccctgatcatagccagggcgtgtttcgaggagctacagaccgactatttgggacta
tggttctttgtggactttgtgtgcgacctcacttacatcgcagacatgatcttcagaaca
aggactggttacctggagcagggtctgctggtgaaggacgagcagaagttgcgtgagcgc
tacaagaacagcttccaattcaagctggacctggtctccatgattcccaccgacttgctg
ttcctggttgttggcgtcaaataccccgaaatccgcctcaacaagctgctcaggttcaac
aggatgctggagttcttccagaggacggagaccaggactaactaccccaacgccctccgt
atctccaacctcgtcatgtacatcgtcatcatcatccactggaacgcctgcctctactac
tccgtctccaaggctatcggtttcggtagtgacaggttcgtgtatcccgacccggcggat
ccagagtttggtcgtctggtgaggaagtatgcctacagtatgtactggtccacactgacg
ctcaccaccattggagagactccgccccccgtggagaactccgagtacttattcgtcgtc
actgacttcctggttggcgtgttgatctttgccaccatcgtcggtaatgtcggttccatg
atcaccaacatgaacgctgccagagccaacttccaggctcgcatcgacgccatcaaacag
tacatgaccttccgaaaggtaacgaaggacctggagaagcgagtgatcaaatggttcgac
ttcctgtggaccaataagaaagcagtggacgagagggaggtgttgaagtacctgcctgac
aaactgagagccgagatcgccatcaacgtccacctggacaccctgaagaaggtccgaatc
tttgcggactgcgaggctggtctgctggtggagctggtgctgaagctgcagcctcaggtc
tacagtccgggagactacatctgcaagaagggcgacatcggcagagagatgtacatcatc
aaggagggaaagctggccgtcgtagccgacgacgggatcaagcagtttgtcgtcctgagt
gacggcagctactttggcgagatcagcatcctggcgattaaaggcagcaaggcgggaaac
aggcggacggccaacatccggagcatcgggtactccgacctcttctgcctctccaaagac
gacctgatggaggcgctgacggagtatcccgacgccaaggccctgctggaggagaaggga
aagcagatcctgatgaaggacggactgctggacctggagctggcggctcagggccccgac
cccaaagagatcgaggagaaggtggaccgcatgacgagcgcgctggacaccctgcagacg
cgttacgcccgactgctggccgagcacgaagccactcacagcaaactgaaacaccgagtc
aaccggctggagaggaagctggcaccgccacgactagagaagaagaagaagcaaaagaag
aagaagttgggttaaaaccaagaggagcaggaacgggaagtctttagaggagttacaaaa
aaacgattcacttcacgtcaccggttcatttcagcgtttcagtcttga
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