Anoplopoma fimbria (sablefish): 129094105
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Entry
129094105 CDS
T09102
Symbol
notch2
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129094105 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
EGF_Teneurin
EGF_3
Ank_4
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
129094105
NCBI-ProteinID:
XP_054458109
LinkDB
All DBs
Position
8:21861254..21907790
Genome browser
AA seq
2533 aa
AA seq
DB search
MEQIPGFSSGKSLVFVFCFIQLSLALQCMDDKAPCVNNATCLTFNNGTEYCRCAPGFLGE
YCHHKDPCHPGFCLNGGNCSVSMLAGVPVPGSAACTCPLGYTGPHCQTPQNSTCYPNNPC
ANKGVCTLLSLDKYKCECARGWTGLQCEHEDSCLSSPCGNGGTCSSPSAGSFTCSCPPGY
TGPRCLNDTNECAATPSICQNGGQCVNTPGSYKCICDPGFTGRHCESSYIPCSPSPCLNG
GTCYQSSATSYYCHCLPGFNGTNCENNIDDCPGHQCANGGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLFGSYVCVCVNGWSGPDCSENIDDCATAACSPGSTC
IDRVASFICLCPYGKTGLLCHRDDACISNPCREGSQCDTNPINGMFNCNCAPGYVGSTCN
IDRDECSIGTNPCEHGGQCVNTDGSFTCNCVRGYAGPRCEQDVNECASSPCQNDGTCLDR
IGDYTCICMPGFEGTHCEIEVNECLSSPCLNQGKCLDQVSRFVCECPAGFSGEMCQIDID
ECSSTPCLNGAKCTDRPNGYDCECAEGFIGLLCEDNINDCDPKPCHHGECKDGIVTFSCE
CQPGYTGSICNIQVQECHSNPCQNRGRCIDLVNAYQCNCPPGTTGLNCEINDDDCASNPC
EYGECHDGINEYKCVCSPGYTGLKCEVEINECSSNPCMSGGTCMDKVNGFHCLCPPSTHG
PLCLTGTDHCARLPCDHGECIEQQHGYRCECEAGWVGQKCEQEKDECQPNPCQNGGTCVD
RHNGYTCQCQPGFRGLNCEKNINECASGPCLHQGICIDGVNSYSCQCSLPFTGKHCEVEQ
VPCASHPCEKGGVCRPSADYTSYTCRCPAGWQGPRCTADVDECIKSPCKNGGRCINGEGS
YTCKCQPGYSGHNCQTDIDDCSPNPCLNGGSCVDDVGSFSCDCRPGFEGERCETEVDECD
SQPCRNGAICRDYVDSFVCECRPGFDGILCERNILECTESSCLNNGTCIDDINAFSCRCR
PGFYGTFCEYEQNECDSQPCKNGGTCTDGLGTYRCTCPVGYNGQNCQNFVNLCSQVRCHN
GGSCSQTSTSWTCHCPMGWTGLYCDVPNMSCQDFAARTGLEVENVCKNAGRCMNVGNSHR
CQCQPGYTGSYCDEMVDECQSNPCRNGATCKDYQGTYECICKPGYQGVNCEYDVNECHSR
PCLHGGTCIDLINRFTCACPPGTHGLQCEVNEDDCAPKSGSFEPRCLHGGQCVDGVGRYT
CSCPPGFVGEHCEGDLNECLSGPCHAPGSLDCVQLVNDYQCRCRLGYTGRHCESMVDLCL
SKPCHKGGVCSMNMSSVHGYTCSCVPGFTGFNCGEIEGYSCAKLRCQNGGRCVESPGHLS
CQCQPGFSGPHCENEERCPWNCQNGGTCIKDPSNLYQYSCRCPMYFSGPYCENKHVTRTS
CPYLQCAQHSGDKVCDDQCNNHECQWDGGDCSLNWEKPWFNCTAGVACWDRFKNGRCDKE
CDNPGCLFDSFECQETPPSCKYDRYCADHFGNGVCDQSCHTEACGWDGLDCSTDTPAKVI
DGTLVIVVRLQPKELLGDLRGFLRSLGALLHTNLQVKLDNNKKPMVYPYYGEEQGRHIQR
RRSKRELDREVIGSVVHLELDNRECSQSSIDCFSNTNEAASFLAAAHIKAELPYPLVSVK
SEPTIDPPVPTPLMYLVGVAVVIILLILVLGMLAAKRKHKHGALWLPDGFLANKNDKRRE
PVGQDDFDMKNFKTQDGAMIDGGQSQRWLEDDVPSKKPRTEDKPLLPIAMDGGVDRREWT
LQHRKAADISLTPPQADLDADLDVNVKGPDGFTPLMLASLRNGGGPDCSLHGEEEEESGG
DEPGPSVISDLIAQGASLKAQTDRTGETALHLAARYARADAAKRLLDAGADPNAHDNMGR
TPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLVLAARLAVEGMVEELIHCHADIN
AVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLD
HYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGGNSSVMCGAN
GVSFIGMRPGPQGKKSRRGGGGAKVGGVGGGAKELKDMKAKRRKKPAGGEGPGVGAAVGA
GSGGGTGGGNANGVKAAGLPESSVTMSPVDSLESPHSYTGDVSGAASTTANSPPLLSSPT
SRPMLPPVSHMLGQQQGWVGMTKHGYGGHMFGLVSHQMGGSHPGMGQHHGQGPMLTPMNV
TMSREQLPPIVTFQMMAPGGSQAMLKQPQQGQVQVTQSQGQSQSQGHSQQGPGRLRCSQG
MMYQMPEQMGMSHGLSHALQHPHTVSHGGHGGIEGQSRPLPSYPPMQSPVDKYPTPPSQH
SYTTTGSEGTTPGHSAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPT
MHCRRHTTHTFQSRCSCSRSRSRCSRPLSRLSTATCRFLHRAARGKHKQTDIGVLCSRIT
TRELKLELFLVSR
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatccccggtttctcctcgggcaaatcactagtgtttgtcttctgcttcatc
caactctctttggctctgcaatgtatggatgataaggcgccttgtgttaacaatgctaca
tgtctgaccttcaacaacggcactgagtactgcaggtgtgcaccaggctttctgggggag
tactgccaccacaaagacccttgtcaccctggcttctgcctgaatggagggaactgctcc
gtgtccatgttagccggcgtacctgtgccaggaagcgccgcctgcacctgcccgcttggc
tacaccggaccgcactgccaaactccccagaactccacgtgttaccccaacaacccctgt
gccaacaagggtgtctgcaccctgctgtctcttgacaaatacaagtgcgagtgtgccaga
ggatggacaggactgcagtgtgagcatgaggacagctgtctatctagtccctgtggcaac
ggtggaacgtgcagctctccgtctgctggcagcttcacatgctcctgtcctcctggatac
accggtcctcgctgccttaatgacacaaatgaatgtgctgccacaccctctatatgccag
aatggaggccaatgcgtcaacacccctggctcttacaagtgtatctgtgacccagggttt
actggcagacactgtgaaagctcctacatcccttgctcaccctcaccgtgcctaaatgga
ggcacctgttaccagagctctgcaaccagctactattgccactgccttccaggtttcaac
gggactaactgtgagaacaacatcgatgactgccctggtcatcagtgtgccaatggagga
acctgcatggatggagtcaatacatacaactgccagtgtccaccagagtggactggtcag
cactgtactgaagatgtggacgagtgtcgtctgcagccaaacacttgccagaatggagga
acctgcagcaacctgtttggcagctatgtctgcgtgtgcgttaatggctggagtggaccc
gactgctctgaaaacatcgatgactgtgctacagcggcatgcagcccaggctccacatgc
atcgaccgcgttgcctctttcatctgtctctgcccctacggaaagacaggcttgctctgc
catagagacgacgcctgtatcagtaacccctgcagagagggttctcagtgcgacaccaat
cccatcaatggcatgtttaactgtaactgtgcacctggatatgtaggcagcacctgcaac
atcgacagggacgaatgcagcattggtaccaacccttgcgagcacggtggtcaatgtgtg
aacaccgatggctccttcacgtgtaactgtgtgaggggttatgctgggcctcgatgtgaa
caagatgtcaacgagtgtgcttcgagcccctgccagaacgatggcacctgtctggatcgt
attggggactacacctgcatctgcatgcctggatttgaggggactcattgtgagatagag
gtgaatgagtgcctcagctcgccctgtctgaaccagggtaaatgtctggaccaggtcagc
cgctttgtctgcgaatgcccagcaggcttcagcggtgaaatgtgccagatagacatagat
gagtgttccagcacaccctgtttaaatggggccaagtgtaccgaccgacccaacggatat
gattgtgaatgtgctgaaggcttcattggtctactttgcgaggacaacatcaatgactgc
gatccaaagccatgccaccacggtgagtgtaaagacggcatcgtcaccttctcctgcgag
tgccaacctggatacacaggctccatctgcaatatccaggtccaggagtgccacagcaac
ccatgtcagaaccgaggacgctgcattgacctggtcaatgcctaccagtgtaactgccca
ccaggaaccacagggttgaactgtgagatcaatgatgacgactgtgctagcaacccctgt
gagtacggagagtgccatgatggcattaacgagtacaaatgcgtgtgctccccaggatat
acaggacttaaatgtgaggtggagatcaacgagtgtagctcaaacccgtgtatgagtggt
gggacctgcatggacaaggtcaacgggttccactgcctgtgtccgcccagcacccacggc
cctctgtgcctcactgggaccgaccactgtgctcgtttgccttgtgatcacggagaatgt
atagaacagcaacacgggtatcgttgtgagtgtgaagccggctgggtgggacaaaagtgt
gagcaggaaaaggatgagtgccagccgaatccgtgccaaaatggtggcacctgtgtggac
cgacataatggctacacctgtcagtgccaacctggattcagaggtttgaactgtgaaaag
aacataaatgaatgtgcatccgggccctgtctgcaccaaggcatttgtatagatggagtc
aacagttattcctgccaatgtagcctgccgttcacaggtaaacactgtgaggtggaacag
gttccctgtgcctctcatccatgtgagaagggaggagtctgtcgcccgtctgcagactac
acatcctacacctgtcgatgtcctgctggttggcaaggtccacgctgcactgccgatgtg
gatgaatgcataaagagcccttgcaaaaatggtggtcgttgcattaatggcgagggcagc
tacacgtgtaaatgtcaacctggatacagcggacacaactgtcagacggatatcgacgac
tgctcgccaaacccgtgcctgaatggaggctcttgcgtggacgatgtcgggagtttctcc
tgtgactgccggccgggttttgaaggggagcgctgtgagactgaggtagacgagtgtgac
agccagccctgcaggaacggtgccatctgcagggattacgtcgacagctttgtgtgcgag
tgccggccaggctttgatggaatcctgtgtgaacgcaacatccttgaatgtaccgagagc
tcctgtctgaataacgggacttgcattgatgacatcaacgccttctcttgccgttgccgt
cctggtttttacgggacgttctgtgaatacgagcagaatgagtgcgactctcagccctgt
aagaatggaggcacctgcaccgatggcctgggaacctaccgctgcacctgccccgttgga
tacaatggacagaactgccagaacttcgtgaacctctgcagccaggtgcgctgtcacaac
ggcggctcctgctctcagacatcgacctcctggacctgccactgtccaatgggatggacg
ggactttactgtgacgtccctaacatgtcctgccaggactttgccgccaggaccggtctg
gaggttgaaaatgtgtgtaagaacgccgggcggtgcatgaatgtgggcaattctcaccgg
tgtcagtgccagccaggatacacgggcagctactgtgacgagatggtggatgagtgccag
tcaaacccttgtcgcaacggagctacatgcaaagactatcagggaacatacgagtgcata
tgtaaaccaggctaccagggagtgaactgtgagtatgatgtcaatgaatgccactccagg
ccctgcctccatggaggaacctgtatcgacctcatcaaccgcttcacctgcgcctgccca
cctggaacacatgggctccagtgtgaagtgaacgaggatgactgtgcccccaagtctggc
tcctttgaaccccgctgtcttcatggaggacaatgtgtggacggcgtgggccgttacaca
tgctcctgccctccgggattcgttggagaacactgtgagggggatctcaatgaatgcctg
tctgggccctgccacgcccccggcagcctcgactgtgtgcagctggtcaacgactaccag
tgccgctgtcgccttggatacacgggtcgtcattgtgagtccatggtggatctgtgtctg
tccaagccgtgccacaaaggtggtgtctgctctatgaacatgagctcagtacatggctac
acctgctcctgcgttcctggctttactggcttcaactgtggcgaaatagagggttacagt
tgtgcaaagctacgctgccagaatggtggtcgctgtgtggagtcacctggccacctgtcc
tgccagtgccagccgggcttcagcggaccacactgtgagaacgaagagagatgtccatgg
aactgccaaaatggaggaacctgcatcaaagacccgtccaacctgtaccagtacagctgc
cgctgtcccatgtacttctcgggaccatactgtgagaacaaacatgtaacacgcacatcc
tgcccctatctgcagtgtgcgcagcattcaggggataaagtgtgtgacgatcagtgtaac
aaccatgaatgtcagtgggatggaggcgactgctcgctcaactgggagaagccgtggttt
aactgcaccgccggtgttgcatgctgggatcgctttaagaatggacgttgtgataaggag
tgtgacaaccctgggtgcctctttgacagctttgagtgccaggagaccccaccgtcctgc
aagtacgacaggtactgcgcagaccactttgggaacggtgtctgtgaccagagctgccac
acggaggcttgtggctgggacggcctggactgctccacggacactccggccaaagtgata
gacggcacgctggtcatcgtggtccggctgcagcctaaggagctgcttggagacctgagg
ggtttcttgcgctccctgggagccctgctgcacaccaacctgcaagtgaagctggataac
aacaagaagccaatggtttacccttactatggggaggagcaaggacgacatatacagagg
agaagaagcaagcgggagctggacagggaggttattggatctgtggtgcacctggaactc
gataaccgtgaatgttcccagagctctatcgactgtttctccaacaccaatgaggctgcg
tctttccttgcggcggcacacatcaaggctgaactgccttaccctctggtgtctgttaaa
agtgagccgacgattgacccaccagttccaacgcctctaatgtacctggttggagtggca
gtggttattattctgctgatcctggtgctggggatgctcgcagccaagaggaagcacaaa
catggcgccctttggctgcctgacggcttcttggccaataagaacgacaaaaggagagag
cctgtcggacaggatgactttgacatgaagaatttcaagacccaggatggagccatgatt
gatggaggtcagagtcagaggtggctggaagacgatgtcccatccaagaaaccaagaact
gaagacaaacccttgctgccgatcgctatggatggaggagttgaccgaagggagtggacc
ctgcagcatcgcaaggctgctgacatctcactgactcccccacaggccgacctggatgct
gaccttgatgtaaacgtcaagggacctgatggcttcaccccgctgatgttggcatcgctg
cgtaatggcggaggcccggactgcagcctgcatggagaagaagaggaggagagcggagga
gacgaaccagggccgagtgtcatttcagatctgatcgctcagggtgcttctctcaaggct
cagactgaccgtacgggggaaacggcgctccacctggctgcccgctacgccagggcagat
gctgctaagagacttctggacgccggagctgatcccaacgctcacgacaacatggggaga
actcctctgcatgctgccgtggcggccgacgcccagggagtcttccagattctgatccgt
aatcgtgcaacagaactggatgcccggatgaatgacggcactaccccactggtcctggca
gcccggctagctgtggagggcatggtggaagagctgatccactgccacgctgacatcaat
gctgtagacgaccacggcaaatctgctctgcactgggcagctgcagttaataatgtggag
gctacactcgtgcttttgaagaacggagccaaccgtgacatgcaagacaataaggaggag
actcctctgtttcttgcagccagagaaggcagcttcgaggcggctcaggttctccttgac
cactactccaaccgtgacatcaccgatcaccttgaccggctgccccgcgacacggctcaa
gaacgcatgcatcacgacatagtgcgcctgctggaccagtacaatttggtccacagtcca
cacaatggcccgaaccacatgggcggagggggaaactcctccgtcatgtgcggcgccaac
ggagtgagcttcatcggcatgcgccctgggccgcaggggaagaagagcaggaggggtgga
ggtggagccaaggtgggaggcgttggaggaggagctaaggagctaaaagacatgaaggca
aagagaagaaagaagcccgctggaggagaggggccgggtgtgggggctgcagtgggagca
ggaagtggaggaggtacaggaggagggaacgccaacggcgtcaaggcagcgggactccca
gagagctccgtcaccatgtcacctgttgactccctggaatcgccgcactcgtacacgggc
gacgtctccggcgccgcctccaccacggcgaactcccctcccctcctgagcagcccgacc
tccagaccaatgctgccgcccgtcagccacatgctgggacagcagcagggctgggtgggc
atgaccaagcacggctacggcggccacatgttcggcctggtgtcgcaccagatggggggg
tctcacccgggcatgggccaacaccacggccagggccccatgctgactcccatgaacgtc
accatgagccgagagcagctgccgcccatcgtcacgttccagatgatggcccccggagga
agccaggccatgctgaagcagcctcagcagggccaggtacaggtcacacagtcccagggg
cagagccagagccagggtcactcccagcaggggccgggccgactccgatgctcccaggga
atgatgtaccagatgcctgagcagatgggcatgtctcacgggctctcccacgccctgcag
cacccccacaccgtcagccacgggggccacggggggattgagggccagtctcggccgctg
ccctcctatccacccatgcagagcccggtggataagtaccccactccaccctcccaacac
agttacaccaccaccggctcggagggcaccaccccgggtcactctgcccacccacccagc
gagcacccgtatctcaccccctcacccgagtccccagacccttggtcgtcctcttcgcca
cactccaactcggactggtctgacgtcaccaccagccccacccctctggggaaccccacc
atgcactgccgtcgtcacaccacacacacattccagagcaggtgcagctgcagccgcagt
cgcagcagatgcagcaggcctctcagccgcctcagcacggcaacatgcaggtttttgcat
agggcggccagaggaaagcataaacagactgacattggggttctgtgtagtcgcataaca
acacgtgaactcaaactcgagctttttctcgtgtctcgttaa
DBGET
integrated database retrieval system
