Anoplopoma fimbria (sablefish): 129094156
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Entry
129094156 CDS
T09102
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129094156 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129094156 (rorca)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129094156 (rorca)
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129094156 (rorca)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129094156
NCBI-ProteinID:
XP_054458171
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Position
8:complement(21505507..21520131)
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AA seq
475 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLTLGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQDCTGLGVREREDGDMS
DHGRTYRRSSTAALSDLDDISMLPEGLLFDLPLTPEEANGDYCNLDMLGGSAGSSSSSQS
SPEQTNLDFVDVKHGIKHEYQLLHDSGLFSHAILNPLPEGCSLLEIERITQSVLKSHIET
SQYSTEELKRMAWTLYSQEETRSYQTKSAEVMWQQCAIHITNAIQYVVEFAKRISGFMDL
CQNDQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFTAAHLFKALGCDDLVNAVFDLA
KSLSRIQMSEEEMALFSAAVLLSPDRPWLTDVQKIQKLQEKVYVALQRCLQKEGASEEKL
AKMVSKLPIMKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccgtgtaaaatctgtggggacaaatcatcagggatt
cactatggtgtcatcacctgtgaaggctgcaagggtttcttccgacgcagccagcagaac
aatgctatgtattcctgctcacgacagaggaactgtttaattgaccggaccaaccgtaac
cgttgtcagcactgcaggctgcagaagtgtctcactctgggcatgagccgcgatgcggtc
aagttcggtcgcatgtccaaaaagcagcgtgacagcctgtatgcagaggtccagaagcac
cagcagtcccaggactgcacggggctcggtgtccgcgagcgagaggacggcgacatgtcc
gaccacggccgcacctacaggagaagctccaccgccgcgctcagcgacctggacgacatc
agcatgctgccagagggtctgcttttcgacctgccgctgacccccgaggaagccaacgga
gactactgtaacctggacatgctgggcggcagtgcaggcagcagctcctcctctcagagt
tcaccagaacagaccaacttggactttgtagacgtcaaacacggcatcaagcacgagtac
cagctgttgcacgactccggcctgttctcgcatgctatcctcaacccgctgcccgagggc
tgctctctgcttgagatagagcgtataactcagagtgtgctgaagtcccatattgagacg
agtcagtacagcacagaggagctgaagagaatggcgtggaccttgtacagccaagaagag
acgcgctcataccagaccaagtcagctgaggtgatgtggcaacaatgtgccattcacatc
accaatgcaatccagtatgtggtggagtttgccaagcgcatctctggcttcatggacctc
tgtcaaaacgatcagatcatcctcctcaaagcaggctgcatggatgttcttctgatccgt
atgtgtcgggcctataaccccatcaacaacacgatgctctttgacggaaagtttacagcg
gctcatcttttcaaagcgcttggctgtgacgacctggtgaatgcggtgttcgacttggct
aaaagcctgagccgtatacaaatgtccgaggaggagatggctctcttcagtgctgctgtg
ctgctctcaccagaccgaccctggctgacagatgttcagaagatacagaagttgcaggag
aaagtctacgtggctctgcagcgctgcctacaaaaagagggagcatcagaagagaaacta
gctaagatggtgtccaagcttcccatcatgaagtccatttgcaaccttcacatcgacaaa
ctggagtttttccgcctggtccaccctgagaccgcgtacaccttccctcctctgtatagg
gaggtttttggcagtgaaatcaccttcccagactccacagagggctag
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integrated database retrieval system
