Anoplopoma fimbria (sablefish): 129094178
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Entry
129094178 CDS
T09102
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129094178
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129094178
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
129094178
NCBI-ProteinID:
XP_054458221
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All DBs
Position
8:3197239..3216913
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AA seq
523 aa
AA seq
DB search
MDGDVAVGVKRGSDELSMYSSSPTSMTANGSDSKKQRLDESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNCYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDPGVLDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGESANKDHSLLGTPSGALASYSSGGGYSSSLSLSQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDGVGEDDLRLLFSNSGGTVKAFKFF
QDRKMALIQMTSVEEAIQTLMELHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcagttggtgtgaagagaggctcagatgagctcagcatgtacagt
agcagcccgacctctatgactgcgaacggcagtgacagtaagaaacagcgactggacgaa
tcccctccttccagagttctccacatcaggaaacttcccaatgaagtgtcagagactgaa
gtcattgccttgggactgcccttcggaaaggtcaccaatatactgatgctgaaggggaaa
aaccaggcgttccttgagttgggcacagaagaagcagccattactatggtgaactgctac
acagctgtcacgccacaggtcagaaacactcccgtcttcatccagtactccaaccataag
gaactgaaaacagactcggctctgaaccagagggcccaggcagtgttgcaggcggtgtca
gcagttcaggatggaagctctccatcctcagaccccggagtgttggacctagctccaccc
cccagtcctgtcctgcgaattatcatcgacaacatgttttatcctgtgacactggacgtt
ctacaacagatcttcagtaagtttgggaccgtgatgaagattataaccttcaccaagaac
aaccagtttcaggctcttctgcagttcagcgacccagtcaatgcacagcaagctaaactg
tctttggatggacagaacatctataattcatgctgtactctgcggatagacttcagtaaa
ctggtcaacctcaacgtcaaatacaacaacgacaagagtcgagattacaccagacccgac
cttcctaccggagatggggagtcggccaacaaggatcattctctattgggtaccccatcc
ggagcgctagcttcctactctagtggaggagggtactcatcttctctctccctctcgcag
ggtggaggagccatcagtcctctcagtgctgcagcagcagcagcagcagccgctggccgc
gttgctctgtctgggtccggagtgtcgggagtcctgttggcatccaacctgaatgaagag
atggtcacgcctcaaagtctctttaccctcttcggagtctatggtgacgtccagagggtg
aagatcctctacaacaaaaaggacagtgctctgatacagctgtctgatggcaaccaggct
cagctggcaatgagccacttgaatggtcaaaaggtgtttggtaaagtgatgagagtgact
ctgtctaaacatcaaaccgtggctttgcctagagaaggattggatgaccaactgctaact
aaagatttttctggctcaccactccatcgctttaagaagccgggatccaaaaacttccag
aacatctttcctccctcagcaacacttcacctctccaacgtccgggatggagtgggagag
gatgatctacgtcttctgttctccaacagtggaggaaccgtcaaggccttcaagttcttc
caggatcgtaagatggccctgatccagatgacgtcggtggaggaggcgatccagactctg
atggagcttcacaactacgacatgggagggaatcaccacctgaaagtttccttttcaaag
tccacaatctga
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