Anoplopoma fimbria (sablefish): 129094191
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Entry
129094191 CDS
T09102
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129094191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094191
Membrane trafficking [BR:
afb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129094191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
129094191
NCBI-ProteinID:
XP_054458239
LinkDB
All DBs
Position
8:complement(18512946..18554057)
Genome browser
AA seq
1683 aa
AA seq
DB search
MAESSLNNSWPSFSKLLMKRWSYKRASECKPCSEPCGPPSAPLRVQPHAPSGTGSSSSSL
SPASIAEDVFFGSNNKDQDACSEVSDYDCPCAEVNSSLEDLLCLSSSLRDSEYFKDLEGG
IPAAQSTASTVTTNPESNNLTVGFQVCLNTDDNPAINQPVQTSLSTHSAQVNAPSSSPFY
IHPEEERHKNFVVTQLSPKLLPGCIIDSGDPTGPALGLSLTINLNGLLGSMETEKGITGS
EEVTEQATMESDGELDLDSLPILVRSMSTSRRHSWGVPLSPINLGRRLSLDTMGMESDGE
REDDEEGEKGLLQSTEPQNYSCTDCPGEKTDGSSLRGPCPRARVTSMACGVPGRHLYSRS
DILATDECSHTAHISRVVQTSKQAARAAGAEEFDPEEHLHSTEGHSHIAKERNNRSDTKV
SGNVTWYEFLSHETEDGGEDRTEKVEKGTKVKRTLSSLRNRVTGSFNKDKGKNREKEQQR
ERGKEKERDSKEKEKVCRRRSSNGHYLVPGAFSSCATCSLCSKTLQSKHGLQCMNCAVNV
HKSCKSLLGDCTSSRNKRDSSQRKYSSGSQSLALKDRHREQEHSGLDGHPGFHCTPGMTI
SSWGLSTQHTAAHTSSSTATSSFGHSLCHNNSSGSLPGEMDETDALRSKRCNEDAISLAP
STTESIIVEDAHYAAVRADLESDAQDLEVESWSLAVDQQYIKKQSKEAVKRQDVIYELMQ
TEMHHVRTLKIMLCVYVRELKENLQMDSGRLDCLFPRLENLLELHTHFLSRLKERQRENL
VSPNERNYTINRVADILISQFSGEIGERMKDSYGDFCSHHTEAVSYYKEQLQNNKKFQNV
IRKVNNLSIVRRLGVSECILLVTQRITKYPVLVERILQNTEAGTEEQEELTRALGLIKDT
IVQVDTLVNLHEKNSRLRDIHNKMEPKAQGKIKDGRVFRREDLAQGRRPLLHAGTVNWKA
ASGRLKDILAVLLSDVLLLLQEKDQRYVFATVDNKPSVISLQKLIVREVAHEEKAMFLIC
ASSNEPEMYEIHTASKEERNTWMRNIRQAVESCPHTEERLFSEEEEARAFRFREFQERLS
QKDAVVVQALTEKLQLFADMAESVAGLEDTASRSRLLLRGDASDLQQGETLLKGAITEVE
NLQNLLQSGVREETPTSRLEEGSGSGVLPRRADTFGGYDSSRSILSKNGSVKKKFSGETR
NRDRSQRASSDPQLKDLCGSHTLEQTVDETCCSPARWNRIWSNSFPEAEFFDRVLMLSQR
LYSLQAIISQQDSHIELQRASLTERASMPGRHRGNVLLEQEKQRTIALQREELASFHKLQ
SQHRQEQQRWERERERHRQQVEATEARLRQREEECRRLEEHLAEERRELESQRKTYQEDL
ERLRESTRSVEKEKERLEHQKKIKRKTIEVAPLSGSLNGELLMSSGLNTSTSVSDQPLPQ
KPLVRPSLSVAPADYPERPELMLWREASSSTLPLKTEVPLHLFSTTNQQHKLVGVQQQIP
TKLAAFSSGKGKGGKIGKASHRTDSTASVDMKQMLPMKLSAREENALKAKRSISPHQQPP
LSAPPQLLPLHHHADQISPPDNGGPDTQSTSSISTSHSQNVQKPPLPPAQSHPQPSMQPP
SIPPHSQSTGSLQSQPHLQPQALSPNAQAHVQVNVHGLPHSHSMPPPYKIPTEDLNKEDV
IFF
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcttctcttaacaactcgtggccctccttctccaaactcttgatgaagaga
tggtcctacaagagagcttcagagtgcaagccatgtagtgagccctgtgggcctcccagt
gccccgctcagagtccagcctcatgctcccagcgggacaggatcctcctcctcctcactc
tccccggcctctatcgctgaggatgtcttctttggcagcaacaataaagaccaggatgca
tgttcagaagtcagcgactatgactgcccctgtgcagaggtgaacagtagtctggaggac
ctgctgtgcctaagctcttcccttagagactctgagtacttcaaagacctggaaggaggg
atcccggctgcacagtcgactgcatccactgtaaccacaaacccagagagcaataaccta
actgttggcttccaggtgtgcctcaacacagacgacaatcctgcaatcaaccagcctgtg
cagacttctttgagcacacactccgctcaggtcaatgcaccatcttcttcccccttctat
atacaccctgaagaggaacgtcataaaaactttgtggtcactcagcttagtcctaaatta
ttgccaggttgtatcattgacagtggtgatcccacaggccctgctttagggcttagcttg
acaattaatctgaatggactgttgggatcaatggaaaccgaaaaaggaataacaggatca
gaggaagtaacggagcaagccactatggagtcagacggagagctagacctagacagcctt
cctattctggtcagatccatgtcgacgtctcggaggcacagctggggcgtccctttgtcc
cccatcaacctggggaggagactcagtcttgataccatgggcatggaaagcgatggagag
agagaggatgatgaagagggagagaaaggtctcctccagtccacggagccgcagaactac
agctgcacagactgtcctggagagaagacagatggctccagcctgaggggcccctgtccg
agagccagagtcactagcatggcctgcggtgttcctggcaggcatctgtactcccgctca
gacatcctcgccacagatgaatgttcccatactgcacacatttctcgtgttgtgcagaca
tccaaacaggccgcaagggcagcaggagcagaagagttcgaccctgaagaacacttacac
tccactgaaggacacagccacatagcgaaagagaggaacaacagatcggacaccaaagtt
tcaggaaatgtcacttggtacgagttcctctctcatgagactgaagatgggggggaggat
cgtacagagaaggtagagaaaggcaccaaggtgaagaggactctcagctcactgaggaac
agggtgaccggctccttcaataaggataagggtaagaacagagaaaaagagcagcagaga
gagaggggcaaggagaaggagcgagactctaaagagaaagagaaagtgtgccgcagaaga
agcagcaatggacattatttggtgccgggcgctttctccagctgtgccacctgctcgctg
tgcagcaaaaccctgcagagcaagcatggcctgcagtgcatgaattgtgctgtgaacgtt
cacaagagctgcaagtctctgctgggtgactgcaccagcagcaggaataagagagattct
tctcagaggaaatactcatcaggatctcaaagccttgcgctaaaagaccggcacagagag
caggagcattcgggcctggatggccacccaggatttcactgcaccccaggcatgaccatt
agttcgtggggactaagcactcagcatactgccgcccataccagcagctccaccgcaacc
tccagctttggccacagcctctgtcacaacaacagctcaggatccctccctggggagatg
gatgagacagatgctctccgctccaaacgctgcaacgaagacgccatttccctcgctccc
tccaccaccgagtccatcatcgttgaagatgcccactatgcagcagtgcgggctgatctg
gagtctgatgcccaggacctggaggtagagtcctggagtttggcggttgaccagcagtat
attaagaagcaatctaaagaagcggtgaagcgacaggatgtgatctatgagctgatgcag
acagagatgcaccatgtgcgaacgctgaagataatgctttgcgtgtatgtccgagagttg
aaggagaacctccagatggactctggcaggctggactgtctgttcccccgtttggaaaac
ctcctcgagcttcacacacatttcctgtctcgtctcaaagagaggcagcgagaaaacctt
gtttcgcccaacgagaggaactacactatcaacagagtggcagacattctgatctcacag
ttctcaggtgagataggagaaaggatgaaggacagttatggagatttctgcagtcaccac
acggaggctgtcagctactacaaagaacagctgcaaaacaacaaaaagttccaaaacgtc
atacggaaagtcaacaacctctccattgtgcgaaggttaggagtgagcgagtgtattctg
ttggtgacgcagcgcatcaccaagtacccagtactagtggagcgcattctgcaaaacact
gaagccggtacagaggagcaagaggaactgactcgagcactgggtctgattaaagacacc
atcgttcaggttgacacgctggttaatctccatgagaagaactctcgactccgagacata
cacaataagatggagccaaaggcacaggggaagatcaaagatggccgagtgtttcgcagg
gaggacttggcgcagggcaggagacctttgctgcacgcgggcacagtcaactggaaagct
gcttctggcaggctcaaagatattcttgcagtgcttctgtcagatgtgttgctcttgcta
caagagaaggatcagagatacgtatttgctacagtggataacaagccgtcagtgatctcc
cttcagaagctgattgtcagggaagtggcccatgaggagaaagccatgtttcttatctgc
gcctcctccaatgagccagagatgtacgagatccacaccgcctccaaggaggagcgaaac
acttggatgagaaacatacggcaagctgttgagagctgtcctcatacggaagagaggctg
ttcagcgaggaggaagaggcacgagctttcaggttcagagaatttcaagagcggctgagc
cagaaggatgcagtggtcgtccaggcccttacagagaagctgcagctgtttgcagacatg
gcagagtccgtggcaggtctagaggacacagcttcacgttccagacttctgctccgagga
gacgcctcagacctccagcagggggagaccctgctcaaaggagcgatcactgaggtggag
aacctccagaacctgctgcagtctggagtgagggaggagactccaacctctcggctggaa
gaggggagcggttctggtgttctgcccagacgagctgataccttcgggggctacgacagc
agccgcagcatcctcagtaagaatggcagtgtgaagaagaagttttctggtgagaccaga
aaccgagacagaagccagagagccagctctgaccctcagctcaaagacctttgtggcagc
cacaccctggagcagacggttgatgagacatgctgctctcctgccagatggaaccgcatc
tggtccaactccttccccgaggctgagttctttgacagagtgctgatgctctcccaaagg
ctctacagtctgcaggccatcatttcacagcaggacagtcacatcgagctgcagcgggcc
tcgttgacagagcgggcctccatgcccggccgccacagagggaacgtgctcctggagcag
gagaaacagcggactatcgctctgcagagagaagagctggccagcttccacaagctgcag
tctcaacaccggcaggagcagcaacgctgggagagggagagggagaggcaccggcaacaa
gtggaggccaccgaggcccggctccgacaaagggaggaggagtgcagacggctggaggag
catctggcagaagagaggagggagctggagagtcagaggaagacgtaccaggaggacctg
gagaggctgagagagtccaccagatctgtggagaaggaaaaggaacgtctggaacaccag
aagaagatcaagaggaagactattgaggtggctcccctgtctggcagtctgaacggggag
ctcctcatgtcctcgggcctcaacacctccaccagtgtctccgaccagcccctcccccag
aagcccctggtgcggcccagcctctccgtcgcaccagccgactatccagagcgccccgag
ttgatgctgtggcgggaggcgagctcctccaccctaccgctgaagacggaggtgccgctt
catctcttcagcaccaccaaccagcagcacaagctggtgggggtgcagcagcagatcccc
accaagctggccgccttcagcagcggcaaagggaaaggaggcaagattggcaaagcctca
catcgcactgacagcactgcctcagtggatatgaagcagatgctgccgatgaagctgtcc
gcccgagaggaaaacgccctcaaggccaagcgttccatcagcccccaccagcagcccccg
ctgtcggcccctcctcagcttcttcccctacatcaccacgcagatcaaatcagtcctcca
gacaatggtgggccagacacccagtccacctcctccatcagcacctcccactctcaaaat
gtccagaagccccccttgccccctgcacagtcccatcctcagccctccatgcagcctccc
agcatccctccccactcacagagcaccggctccctccagagccagccccatctgcagccg
caggccctcagtcccaacgcccaggcccatgtccaggtaaacgttcacgggctcccccac
agccacagcatgccgccaccgtacaagatccccacagaagacctcaataaggaggatgtc
atcttcttctaa
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