Anoplopoma fimbria (sablefish): 129094197
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Entry
129094197 CDS
T09102
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129094197 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
129094197 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129094197 (lsm7)
03041 Spliceosome [BR:
afb03041
]
129094197 (lsm7)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129094197 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
129094197 (lsm7)
Spliceosome [BR:
afb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129094197 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129094197
NCBI-ProteinID:
XP_054458247
LinkDB
All DBs
Position
8:18469511..18472121
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagagaagaagaagaaggagagcatcttcgacttgtcaaaatacatcgac
aagccgatccgtgtgaagtttcaaggaggacgagaagccagcggagtcctgaagggtttt
gatcctctgttgaacctggtgttggacggcacaatagagtacatgcgtgatccagatgac
cagctgaagctgacagaagacaccaggcagctgggcctggtggtctgcagaggaacctcc
gtcgtgctcatctgtcctcaggacggcatggaggctataccaaacccgttcgtacagcag
caggacggctaa
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