Anoplopoma fimbria (sablefish): 129094209
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Entry
129094209 CDS
T09102
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03272
Virion - Hepatitis viruses
afb04514
Cell adhesion molecules
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129094209
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129094209
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129094209
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129094209
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129094209
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Spectrin_Anc-1
Syntaxin
KELK
FapA
Motif
Other DBs
NCBI-GeneID:
129094209
NCBI-ProteinID:
XP_054458261
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Position
8:12724329..12742266
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AA seq
558 aa
AA seq
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MFDKQHYESPPVYSPPFSSPSNNGFGPPGSFHGPQSDYNANPPPPGSYYIEDKPQHFYKW
LSPPGIIKAMLATVIVLCVAIFACVASTLMWDMQYGMGMGMGYGSGYGGGGYGGGGYGGG
SYGSGYGGYGGGYGGGYGGGYGGGYGNSYGSYISPYSAKTAMIAMAAINFIGALSFFITS
FSKSNMVRTRKFFLALMITSIIMAILQGIISIVYIVGVNPMAQGTSSMMYNPMLMMCQNL
YQTSYSQMGGVGGFPIYNQYLYHYCFVDPQEGIAMVCGFLVVIAFGVAAFFAHKTRGKIW
RYGKPNIYWEEPLVGGKASEGRDVEEWVNNVEESRSVQDAPTLLLSEKGAGLLSASANSV
ISYPPAKVDSSSYNEDTYDNKEYSERTTSRPSEAFSHGGRTSSSPSEETGGGRKPSANRG
KRRRRNPELDESQYETEYTTGGETGNELDGEEWENTYPDITSDAQRQDYKREFDMDLRQY
KRLCTEMDDINDQMNKLSRQLDTLDETSAKYQAAAEEYNQLKDLKQTSDYRSKKKECRRL
RHKLFHLKRMVKDYDKNH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagcagcactacgagagtccacctgtctacagtcctcctttcagctcgcca
tccaacaacggctttggccctccaggaagcttccatggccctcagagcgactacaatgca
aacccacctccaccgggatcttactacattgaggacaaaccgcagcacttctacaaatgg
ctgtcacctccgggaatcatcaaggccatgctggctacagtgattgtgttgtgtgtggca
atatttgcctgcgtggcctccaccctcatgtgggacatgcagtatggaatgggcatgggc
atgggctatggcagtggatacggtggcggtggatacggtggcggtggatacggtggcggt
agctacggctcaggatacggtggttatggaggaggttatggaggaggttatggaggaggt
tatggaggaggctacggcaacagctatggctcctacatctcaccttactcagccaaaacc
gccatgattgccatggcagccattaacttcataggggcactgtcgttcttcattaccagc
ttctctaaatccaacatggtccgcactaggaagttctttttggccctcatgataaccagc
atcatcatggctatcctgcagggtatcatcagcatcgtctacattgttggggtgaacccc
atggcccaaggcacctccagtatgatgtacaatccaatgttaatgatgtgccagaacctc
taccagaccagctactcacagatgggaggagtgggaggcttccccatttacaaccagtat
ctctaccattactgctttgttgacccacaggagggaattgccatggtgtgtggattcctg
gttgtcattgcctttggtgttgcggctttctttgcacacaaaacaagagggaagatctgg
cgctacgggaaaccaaatatctactgggaagaacctcttgttggcgggaaggcctcagag
ggcagagacgtagaggaatgggtgaacaatgtggaggaaagccgcagtgttcaagacgcc
ccaaccctgctgttgtcagagaagggagccgggctgctcagcgcctcagcgaacagtgtc
atctcctaccctccggccaaggtggacagcagctcctataatgaggacacctacgacaac
aaagagtactcagagaggaccaccagcagaccatcagaagccttctcccatggtggaaga
accagctccagcccgtcagaggagactggcgggggtcgcaaaccctccgccaacaggggc
aagagacgcaggcgtaacccggagctggatgagtctcagtatgagacagagtacaccacc
ggaggagaaacaggcaatgaactagacggagaagagtgggagaatacgtacccagatata
acatctgatgctcagcgtcaagactataagagagagtttgatatggaccttaggcaatac
aagcgcctgtgtactgagatggacgacattaatgaccagatgaacaaactcagccggcag
ctggacacacttgatgagacctctgccaaataccaggctgcggcagaagaatataatcag
ttgaaggatctgaagcagacatcagactacaggtctaagaagaaggagtgtcgcaggctg
agacacaagctgttccacctcaaacgcatggtgaaggactacgacaagaaccactga
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