Anoplopoma fimbria (sablefish): 129094231
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Entry
129094231 CDS
T09102
Symbol
uba52
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03010
Ribosome
afb04120
Ubiquitin mediated proteolysis
afb04137
Mitophagy - animal
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
129094231 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129094231 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129094231 (uba52)
04137 Mitophagy - animal
129094231 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
afb03011
]
129094231 (uba52)
04121 Ubiquitin system [BR:
afb04121
]
129094231 (uba52)
Ribosome [BR:
afb03011
]
Ribosomal proteins
Eukaryotes
Large subunit
129094231 (uba52)
Archaea
129094231 (uba52)
Ubiquitin system [BR:
afb04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
129094231 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
TBK1_ULD
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
129094231
NCBI-ProteinID:
XP_054458290
LinkDB
All DBs
Position
8:13453132..13455099
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPXAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaagacgttgacggggaagaccatcacccttgaggttgagcccagt
gacactatcgaaaatgtcaaggcaaagatccaggacaaggaaggaattcctcctgatcag
cagcgtctgatcttcgctggcaaacagcttgaagatggacgcacactgtctgactacaac
atccagaaagaatccactctgcatctggttctgcgtctgcgtggtggcatcattgagcct
tctctcagacagctggcccagaaatacaactgtgacaagatgatctgccgcaagtgctat
gcccgtctgcaccccngtgctgtcaactgtcgcaagaagaagtgtggacacaccaacaat
cttcgccccaagaagaagctgaagtag
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