KEGG   Anoplopoma fimbria (sablefish): 129094243
Entry
129094243         CDS       T09102                                 
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
  KO
K10357  myosin V
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    129094243 (si:dkey-110c1.10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129094243 (si:dkey-110c1.10)
   04131 Membrane trafficking [BR:afb04131]
    129094243 (si:dkey-110c1.10)
   03029 Mitochondrial biogenesis [BR:afb03029]
    129094243 (si:dkey-110c1.10)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:afb04812]
    129094243 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     129094243 (si:dkey-110c1.10)
   mRNA cycle factors
    P-body specific factors
     129094243 (si:dkey-110c1.10)
Membrane trafficking [BR:afb04131]
 Others
  Actin-binding proteins
   Myosins
    129094243 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:afb03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    129094243 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:afb04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     129094243 (si:dkey-110c1.10)
SSDB
Motif
Pfam: Myosin_head DIL IQ nSTAND3 AAA_22 Thioredoxin_14 Myosin_N Ssu72 NPHP3_N AAA_16
Other DBs
NCBI-GeneID: 129094243
NCBI-ProteinID: XP_054458306
LinkDB
Position
8:22479571..22507915
AA seq 1657 aa
MTSLELYSKGASVWIPDPDAVWVSGLLLQDYSPGDKHLLLQLSDGTEVQYPVGSPSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGASQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRSLKLDAPEHFRYTSQGGEMQIPGTDD
LSDLERTRNAFTILGVQPDQQMELFRILSAVLYLGNVNIQASGRSSDRSYIDADDRPLAV
FSKLLGVEGPQMAHWLCHRRLAVGGEMLVKPVSGQQALEARDALAKHIYGQLFTWTVQRL
NSALRTQREQTKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWSRIEFSDNQQCINLLEGQLGLFDLLDEECRMPKGSDESWVRKLYDQHLTSKPHP
HFQKPRMSNSAFVVLHFADTVQYECDGFLGKNRDTVFEELINILKASQSELVAELFQQQG
NVSSVANGSVRSGKRATREHKLTVGFQFRQSLQMLMDTLNNTTPHYVRCIKPNDLKEAFM
FDPRRTVQQLRACGVLETIRISAAGFPSRWTYEEFFNRYRLLLRGPQGQEQAQASCRRAL
PQLIPDPDQYCFGKTKVFFRAGQVALLERLRADRLRVAAVIIQSRVRGWLARIRYTRISW
ATVTIQRYCRGALARRLALTLRYTKAALVIQKNFRMGMVRQLFLMIRQATITIQAFTRGT
FARRRYRLVVAECAAVLLQARVRGWLARQTYRRVRAAVVFMQCCARRRAARRELMKLKTE
ARSVEKFRALNKGMEVKLMQLQLRADQEARESSALRETLHTEREATNAELEAFRATVKKL
ESQKQEKPQPCLIINEKEVEERRKAEEKAAQEILHLTQELQALQIEKDSICKEREDLSAR
LLDQEKAQEECVNQAVSQASAALRAELDEERRKYQGLLREFTRLEQRYDNLREMSLLTER
TKGHRRTDSTQSLEPLSPSTDPLSPTFLTPLSLSPFPSTFPYPDEVRRVSVTSPTVERRV
SVWGIETPMDQLMEMMDVAKDPAVKMKGEDLAHAYDAVRVANKFLESQLRNQCSQREEEL
EALRWQLSQATSGSSSAAQKQELDGLLEAREQECVRLRRELKELKNTVSLRRLLTQVFTP
ETTSSPTQPKPATVTGLLECRKRDEAKLIKNLITDIRVDSALSLPPGLPASVLFLCVRQA
DCSGDQTHARSLCSAAVTAVKAALKKHSNDVNMTALWLKNACLLHDLLTQHSRKQTLDSD
EVVPLTADLSDLIHALSDLCIQAYQQLLSITEKRLQNIIVPALLESETIPGLSGSAVKLG
TSRKRAGSDPRNVGGDAQTMASVLRVLGALHTALSHQDLPRTLMEQAFHQLTYLISASAF
NSLLLRKDMCCWNRGMQIRYNVSLLEEWMRSRSLQTGGAVATLEHLIQAVQLLQAGKKTE
ADAQALVQTCTALSSQQIVKILTLYTPNSDLDERVTLNFIRTVQGLLKGRSDGQPPQLLM
DVRRVFPVTFPYSPPPGLRTEQLVIPDSLKISFLRRA
NT seq 4974 nt   +upstreamnt  +downstreamnt
atgacatcactggagctttacagtaagggagcgagtgtgtggattcctgaccccgatgca
gtttgggtgtcaggcctgctccttcaggactacagtcctggagacaaacatctactgcta
cagctctctgatggaacggaggtccaatacccagtggggtccccctctgatctcccaccg
ctggggaaccccgacatcctggagggggaaaatgatctgacagctctgagtttcctccat
gaacctgcggtcttgcacaacctgcgggttcgattcctggactacagcagcatctacaca
tactgtggtattgtgttagtggccatcaatccctatgaccagctccccatatacggagag
gaggtgatcgatgcttatagcggtcaggacatggccgacatggaaccccacatcttttct
gtggcagaggaggcctaccgcactatgaccagggaggagaaaaaccagtccatcatcatc
agtggagagtctggatcgggaaaaacggtctcagccaaattcaccatgcgatactttgct
gtggttggaggagcatcacagcagaccagcgtggaggagagggttctggcttccaaccca
attatggagtctattgggaacgctaaaaccactcgaaatgacaacagtagtcgttttggg
aagtacatcgagatcggctttggcagaaaaggggacatcattggggcgaacatgaggacg
tatctactggagaagtcaagggttgtcttccaagcatcagcagagaggaactaccacatc
ttctaccagctgtgtgcttccagagagttgcctgaaatgagatccctaaaactggacgct
cctgagcatttccgctacaccagccagggaggggagatgcagattcctggtactgatgac
ctgtcggacctggagcgcacgcgcaatgctttcaccatcctgggtgtgcagcctgaccag
cagatggagctcttcaggatcctatcagctgttctgtatctgggaaatgtcaacattcaa
gccagtgggagaagttctgaccggagttatattgatgcagacgaccgacctctggccgtc
ttctccaagctgttaggagtagaaggacctcagatggcccactggctgtgtcaccgcaga
ctggctgttggaggagagatgctggtcaaacccgtgtccggacaacaggccctagaagct
agagatgcactggccaaacatatctacggccagctgtttacctggaccgtccagaggctc
aactctgctctgcgcactcagagagaacagaccaaatcctttataggggtactggacatc
tacgggtttgagacctttgaccggaacagtttcgagcagttctgcataaattatgcgaat
gaaaaactgcaacagcaattcaacaggcatgtgttccacttggagcaggaggagtacgtc
cgtgaagagctggcctggagcaggattgagttcagtgataaccagcagtgcatcaatctc
ttagagggacagctgggcctgtttgatcttttagacgaggagtgtcggatgcccaaaggt
tcagatgagagctgggtgaggaagctgtacgatcaacacctgaccagcaagccacaccct
cacttccagaaacctcgcatgtctaacagcgccttcgtcgttctgcactttgctgacaca
gtgcaatatgaatgcgatggctttttgggcaagaatcgagacacagtctttgaggagctc
attaacatcctcaaagcaagtcagtctgagctggtggccgaactgttccagcagcaggga
aatgtttcctctgtggctaatgggagtgttcgttcagggaaaagagccaccagagagcat
aaactgacagtgggcttccagttccgtcagtccttacagatgctaatggacactctgaac
aacaccactcctcactatgtccgctgtattaaacccaacgacctcaaagaagcttttatg
tttgaccccaggaggacagtccagcagttgagagcctgtggggtgctggagacgattcgc
atcagtgctgcaggttttccatccagatggacgtacgaggagttcttcaacagataccgt
cttctgcttcggggtcctcagggtcaggagcaggctcaggcctcgtgcagacgagccctg
cctcagctcatcccggacccagaccagtactgctttggaaagaccaaagtatttttccgg
gccggtcaagtggctctcctggagaggctgagagctgacaggcttcgtgtggctgctgtg
atcatccagagccgggtcagaggttggctggcacggattagatacaccaggatctcctgg
gctactgtcactatacagagatactgcaggggagctctggccagacgactggccctgacg
ctgcgctacaccaaggctgctttagtaatccagaagaacttccgcatggggatggtcaga
cagctgttcctcatgatccgacaggccaccatcaccatccaggccttcaccagaggcaca
tttgcacgccgcagatacagactggtggtggcggagtgtgctgctgtgttgcttcaggcg
agagtgcgtggctggctggcgaggcagacgtacaggcgagtacgtgcggctgtggtgttc
atgcagtgctgcgctcgccgcagggctgccaggagagagctgatgaaactgaagaccgag
gcccgctcagtggagaagttcagagcgctcaacaagggcatggaggtcaaactgatgcag
ctgcagttgagagcggaccaagaggccagggagagctcagctttgagagagaccctgcat
acagagcgagaagccaccaacgctgagctggaggctttcagagcgacggttaaaaaacta
gagagtcagaaacaggagaagcctcagccctgcctcatcatcaacgagaaggaggtggag
gaaagaaggaaagctgaggagaaggctgcccaggagatccttcatctcacacaagagttg
caagccctgcagatagaaaaggacagtatttgcaaagagagagaggatctctctgctcgc
ttgcttgatcaagaaaaagcgcaagaagagtgtgtgaatcaggctgtgtctcaggcgagt
gcagctctgagggcggagctggatgaggagaggagaaagtatcagggtctcctgagagag
ttcaccagactggagcaaagatacgacaacctcagggagatgagtctgctcaccgagcgc
accaagggccacagaaggacggactccacccagagcttggagcctctctctccctccacc
gatccgctgtcacccacgtttctcaccccactctcactgtcacccttcccatctaccttc
ccttacccggatgaggtccgtagggtcagcgtgacgtctcccaccgtggaaaggagagtc
tcagtgtggggcatcgaaacgccaatggaccagttgatggagatgatggacgtggccaaa
gacccggcagtgaagatgaaaggagaggacttggcacatgcttacgacgctgtacgagtg
gccaacaagtttctggagagccagctgcgtaaccagtgcagtcagagagaggaggagctg
gaggctctgaggtggcagcttagtcaagcgacctctggttcttcttctgctgcacagaaa
caggaactggatggactactagaggccagagagcaagagtgtgtcagattgaggagagag
ctgaaggagcttaaaaacacagtctcactcagacgactcctgacacaagtttttacccca
gagacgacatccagtccaacccagccgaagccagcaacagtcactggtttgctggaatgt
aggaagagagacgaagccaagctcatcaagaacctcatcacagacatccgtgttgacagc
gccctgtctctgcctcctggcctgcctgccagcgtgctcttcctgtgtgttcgtcaggcc
gactgcagcggagaccaaacgcacgcacgctcgctctgtagcgccgctgtcactgctgtg
aaggcagctctgaagaaacatagtaacgatgtaaatatgacagctctgtggctgaaaaac
gcttgcctgctgcacgacctgttgacccagcactcccggaaacagacccttgactcagac
gaagtggttccactgaccgctgacctgagtgacttgatccacgcactgagtgacctctgc
atccaggcctatcagcagctcctctccatcactgaaaaacgtctgcaaaacatcatagtc
cctgctctgttagagagcgagacaatcccaggtctgtccggctcggcagtgaagctggga
acgtccagaaagcgagcgggttcggaccccaggaatgtgggaggcgatgcgcagactatg
gcgtcggtgctaagggtgctgggagcccttcacaccgctctgtcccatcaggatctgccc
cggacactgatggagcaggccttccaccagctcacctacctcatctctgcctccgctttc
aacagcctactgctgaggaaagacatgtgctgctggaaccgtggcatgcaaatacgctat
aatgtgagtcttttggaggagtggatgcggagccgaagtctgcagacagggggcgctgtg
gccacactggagcacctcatccaggcagttcagcttctgcaagctgggaaaaagacagag
gcggacgcacaggcccttgttcaaacctgcactgccctgtccagccagcagattgtgaag
attctgaccctctacactcccaacagtgaccttgacgaaagagtcacactgaatttcatc
cgtactgttcaggggcttctcaaaggccgatccgacggtcagcctccacagctcctcatg
gatgtgagacgagtgtttccagtcacatttccctactcgcctcccccaggcctccgtact
gagcagttagtcatcccagactccctcaagatctcctttctccgcagagcctag

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