Anoplopoma fimbria (sablefish): 129094243
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Entry
129094243 CDS
T09102
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129094243 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129094243 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
afb04131
]
129094243 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129094243 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129094243 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129094243 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
129094243 (si:dkey-110c1.10)
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Myosins
129094243 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129094243 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
129094243 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Thioredoxin_14
Myosin_N
Ssu72
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
129094243
NCBI-ProteinID:
XP_054458306
LinkDB
All DBs
Position
8:22479571..22507915
Genome browser
AA seq
1657 aa
AA seq
DB search
MTSLELYSKGASVWIPDPDAVWVSGLLLQDYSPGDKHLLLQLSDGTEVQYPVGSPSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGASQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRSLKLDAPEHFRYTSQGGEMQIPGTDD
LSDLERTRNAFTILGVQPDQQMELFRILSAVLYLGNVNIQASGRSSDRSYIDADDRPLAV
FSKLLGVEGPQMAHWLCHRRLAVGGEMLVKPVSGQQALEARDALAKHIYGQLFTWTVQRL
NSALRTQREQTKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWSRIEFSDNQQCINLLEGQLGLFDLLDEECRMPKGSDESWVRKLYDQHLTSKPHP
HFQKPRMSNSAFVVLHFADTVQYECDGFLGKNRDTVFEELINILKASQSELVAELFQQQG
NVSSVANGSVRSGKRATREHKLTVGFQFRQSLQMLMDTLNNTTPHYVRCIKPNDLKEAFM
FDPRRTVQQLRACGVLETIRISAAGFPSRWTYEEFFNRYRLLLRGPQGQEQAQASCRRAL
PQLIPDPDQYCFGKTKVFFRAGQVALLERLRADRLRVAAVIIQSRVRGWLARIRYTRISW
ATVTIQRYCRGALARRLALTLRYTKAALVIQKNFRMGMVRQLFLMIRQATITIQAFTRGT
FARRRYRLVVAECAAVLLQARVRGWLARQTYRRVRAAVVFMQCCARRRAARRELMKLKTE
ARSVEKFRALNKGMEVKLMQLQLRADQEARESSALRETLHTEREATNAELEAFRATVKKL
ESQKQEKPQPCLIINEKEVEERRKAEEKAAQEILHLTQELQALQIEKDSICKEREDLSAR
LLDQEKAQEECVNQAVSQASAALRAELDEERRKYQGLLREFTRLEQRYDNLREMSLLTER
TKGHRRTDSTQSLEPLSPSTDPLSPTFLTPLSLSPFPSTFPYPDEVRRVSVTSPTVERRV
SVWGIETPMDQLMEMMDVAKDPAVKMKGEDLAHAYDAVRVANKFLESQLRNQCSQREEEL
EALRWQLSQATSGSSSAAQKQELDGLLEAREQECVRLRRELKELKNTVSLRRLLTQVFTP
ETTSSPTQPKPATVTGLLECRKRDEAKLIKNLITDIRVDSALSLPPGLPASVLFLCVRQA
DCSGDQTHARSLCSAAVTAVKAALKKHSNDVNMTALWLKNACLLHDLLTQHSRKQTLDSD
EVVPLTADLSDLIHALSDLCIQAYQQLLSITEKRLQNIIVPALLESETIPGLSGSAVKLG
TSRKRAGSDPRNVGGDAQTMASVLRVLGALHTALSHQDLPRTLMEQAFHQLTYLISASAF
NSLLLRKDMCCWNRGMQIRYNVSLLEEWMRSRSLQTGGAVATLEHLIQAVQLLQAGKKTE
ADAQALVQTCTALSSQQIVKILTLYTPNSDLDERVTLNFIRTVQGLLKGRSDGQPPQLLM
DVRRVFPVTFPYSPPPGLRTEQLVIPDSLKISFLRRA
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactggagctttacagtaagggagcgagtgtgtggattcctgaccccgatgca
gtttgggtgtcaggcctgctccttcaggactacagtcctggagacaaacatctactgcta
cagctctctgatggaacggaggtccaatacccagtggggtccccctctgatctcccaccg
ctggggaaccccgacatcctggagggggaaaatgatctgacagctctgagtttcctccat
gaacctgcggtcttgcacaacctgcgggttcgattcctggactacagcagcatctacaca
tactgtggtattgtgttagtggccatcaatccctatgaccagctccccatatacggagag
gaggtgatcgatgcttatagcggtcaggacatggccgacatggaaccccacatcttttct
gtggcagaggaggcctaccgcactatgaccagggaggagaaaaaccagtccatcatcatc
agtggagagtctggatcgggaaaaacggtctcagccaaattcaccatgcgatactttgct
gtggttggaggagcatcacagcagaccagcgtggaggagagggttctggcttccaaccca
attatggagtctattgggaacgctaaaaccactcgaaatgacaacagtagtcgttttggg
aagtacatcgagatcggctttggcagaaaaggggacatcattggggcgaacatgaggacg
tatctactggagaagtcaagggttgtcttccaagcatcagcagagaggaactaccacatc
ttctaccagctgtgtgcttccagagagttgcctgaaatgagatccctaaaactggacgct
cctgagcatttccgctacaccagccagggaggggagatgcagattcctggtactgatgac
ctgtcggacctggagcgcacgcgcaatgctttcaccatcctgggtgtgcagcctgaccag
cagatggagctcttcaggatcctatcagctgttctgtatctgggaaatgtcaacattcaa
gccagtgggagaagttctgaccggagttatattgatgcagacgaccgacctctggccgtc
ttctccaagctgttaggagtagaaggacctcagatggcccactggctgtgtcaccgcaga
ctggctgttggaggagagatgctggtcaaacccgtgtccggacaacaggccctagaagct
agagatgcactggccaaacatatctacggccagctgtttacctggaccgtccagaggctc
aactctgctctgcgcactcagagagaacagaccaaatcctttataggggtactggacatc
tacgggtttgagacctttgaccggaacagtttcgagcagttctgcataaattatgcgaat
gaaaaactgcaacagcaattcaacaggcatgtgttccacttggagcaggaggagtacgtc
cgtgaagagctggcctggagcaggattgagttcagtgataaccagcagtgcatcaatctc
ttagagggacagctgggcctgtttgatcttttagacgaggagtgtcggatgcccaaaggt
tcagatgagagctgggtgaggaagctgtacgatcaacacctgaccagcaagccacaccct
cacttccagaaacctcgcatgtctaacagcgccttcgtcgttctgcactttgctgacaca
gtgcaatatgaatgcgatggctttttgggcaagaatcgagacacagtctttgaggagctc
attaacatcctcaaagcaagtcagtctgagctggtggccgaactgttccagcagcaggga
aatgtttcctctgtggctaatgggagtgttcgttcagggaaaagagccaccagagagcat
aaactgacagtgggcttccagttccgtcagtccttacagatgctaatggacactctgaac
aacaccactcctcactatgtccgctgtattaaacccaacgacctcaaagaagcttttatg
tttgaccccaggaggacagtccagcagttgagagcctgtggggtgctggagacgattcgc
atcagtgctgcaggttttccatccagatggacgtacgaggagttcttcaacagataccgt
cttctgcttcggggtcctcagggtcaggagcaggctcaggcctcgtgcagacgagccctg
cctcagctcatcccggacccagaccagtactgctttggaaagaccaaagtatttttccgg
gccggtcaagtggctctcctggagaggctgagagctgacaggcttcgtgtggctgctgtg
atcatccagagccgggtcagaggttggctggcacggattagatacaccaggatctcctgg
gctactgtcactatacagagatactgcaggggagctctggccagacgactggccctgacg
ctgcgctacaccaaggctgctttagtaatccagaagaacttccgcatggggatggtcaga
cagctgttcctcatgatccgacaggccaccatcaccatccaggccttcaccagaggcaca
tttgcacgccgcagatacagactggtggtggcggagtgtgctgctgtgttgcttcaggcg
agagtgcgtggctggctggcgaggcagacgtacaggcgagtacgtgcggctgtggtgttc
atgcagtgctgcgctcgccgcagggctgccaggagagagctgatgaaactgaagaccgag
gcccgctcagtggagaagttcagagcgctcaacaagggcatggaggtcaaactgatgcag
ctgcagttgagagcggaccaagaggccagggagagctcagctttgagagagaccctgcat
acagagcgagaagccaccaacgctgagctggaggctttcagagcgacggttaaaaaacta
gagagtcagaaacaggagaagcctcagccctgcctcatcatcaacgagaaggaggtggag
gaaagaaggaaagctgaggagaaggctgcccaggagatccttcatctcacacaagagttg
caagccctgcagatagaaaaggacagtatttgcaaagagagagaggatctctctgctcgc
ttgcttgatcaagaaaaagcgcaagaagagtgtgtgaatcaggctgtgtctcaggcgagt
gcagctctgagggcggagctggatgaggagaggagaaagtatcagggtctcctgagagag
ttcaccagactggagcaaagatacgacaacctcagggagatgagtctgctcaccgagcgc
accaagggccacagaaggacggactccacccagagcttggagcctctctctccctccacc
gatccgctgtcacccacgtttctcaccccactctcactgtcacccttcccatctaccttc
ccttacccggatgaggtccgtagggtcagcgtgacgtctcccaccgtggaaaggagagtc
tcagtgtggggcatcgaaacgccaatggaccagttgatggagatgatggacgtggccaaa
gacccggcagtgaagatgaaaggagaggacttggcacatgcttacgacgctgtacgagtg
gccaacaagtttctggagagccagctgcgtaaccagtgcagtcagagagaggaggagctg
gaggctctgaggtggcagcttagtcaagcgacctctggttcttcttctgctgcacagaaa
caggaactggatggactactagaggccagagagcaagagtgtgtcagattgaggagagag
ctgaaggagcttaaaaacacagtctcactcagacgactcctgacacaagtttttacccca
gagacgacatccagtccaacccagccgaagccagcaacagtcactggtttgctggaatgt
aggaagagagacgaagccaagctcatcaagaacctcatcacagacatccgtgttgacagc
gccctgtctctgcctcctggcctgcctgccagcgtgctcttcctgtgtgttcgtcaggcc
gactgcagcggagaccaaacgcacgcacgctcgctctgtagcgccgctgtcactgctgtg
aaggcagctctgaagaaacatagtaacgatgtaaatatgacagctctgtggctgaaaaac
gcttgcctgctgcacgacctgttgacccagcactcccggaaacagacccttgactcagac
gaagtggttccactgaccgctgacctgagtgacttgatccacgcactgagtgacctctgc
atccaggcctatcagcagctcctctccatcactgaaaaacgtctgcaaaacatcatagtc
cctgctctgttagagagcgagacaatcccaggtctgtccggctcggcagtgaagctggga
acgtccagaaagcgagcgggttcggaccccaggaatgtgggaggcgatgcgcagactatg
gcgtcggtgctaagggtgctgggagcccttcacaccgctctgtcccatcaggatctgccc
cggacactgatggagcaggccttccaccagctcacctacctcatctctgcctccgctttc
aacagcctactgctgaggaaagacatgtgctgctggaaccgtggcatgcaaatacgctat
aatgtgagtcttttggaggagtggatgcggagccgaagtctgcagacagggggcgctgtg
gccacactggagcacctcatccaggcagttcagcttctgcaagctgggaaaaagacagag
gcggacgcacaggcccttgttcaaacctgcactgccctgtccagccagcagattgtgaag
attctgaccctctacactcccaacagtgaccttgacgaaagagtcacactgaatttcatc
cgtactgttcaggggcttctcaaaggccgatccgacggtcagcctccacagctcctcatg
gatgtgagacgagtgtttccagtcacatttccctactcgcctcccccaggcctccgtact
gagcagttagtcatcccagactccctcaagatctcctttctccgcagagcctag
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integrated database retrieval system