Anoplopoma fimbria (sablefish): 129094297
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Entry
129094297 CDS
T09102
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129094297 (mindy4)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129094297 (mindy4)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
129094297 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
M60-like_N
Motif
Other DBs
NCBI-GeneID:
129094297
NCBI-ProteinID:
XP_054458378
LinkDB
All DBs
Position
8:18171756..18178765
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AA seq
713 aa
AA seq
DB search
MAVLVEEVSSSVVREYLSRKGLKRTIACMDEEHPRTESSINNRSHLRQILNMEALYRNNK
AQISPLKTLLEIIVKHHIEGLKKDQITSSKSDPLQSARAVSVIANSPAVMSPGVNDTRPE
DSTAFVISKHVKLRSDIGEICPSKPIYTSLLPETDGLSSQNQTSIWSYDSEDHKRQPLLA
SLQDNESFIRREPEKKSSTTESTQRSRTNRIRRGMIAGPISSTCQESNKRRQNRRLEVPQ
QQLRKEEENKQSRDGLLVTGTHQKSSESSLTAINSADCSGGQWELWSAPDRLQREISFEK
VQKDILITTKAKSFSRPNVADLDVAEMVLDDIDDDEDLRELSKVSFQRTVAEPSYAGRPM
DQHTAMELKAILIGSRQNCFSVEWRNQGFTFSETHDLRYGIVQKKGGPCGVLASIQAFVL
KKMLFENIESSNSVLQRLRPSNTTRRKCLALAAAEILWRAGGEKQATIAINSGRNHFTPT
GYYKSEGVLEKITCFTVDKIKDLHFLLERHIDQFETGVLGCILLTISALLSRSIEKVRED
MDVPTNTLIGAHGYCTQELVNLLLFGRAVSNVFDNDMELDSGNGNMTLLKGVKGHCDVGL
LSLFEHYNICKVGAYLKSPRYPIWVVCSESHFSVLFGLQRELLTNQDQSLEFDLYYYDGL
ANQQEEIRLTVAVGESALSCQDVHTDLIPPLEHCIRTRWKDAFVNWNDTEPIL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgttagttgaagaggtgtcttcgtccgttgtccgcgaatacctgagtcgcaag
ggactcaagaggaccattgcttgtatggatgaagagcatccacgcacagaatccagcatc
aacaacagatcacacctgaggcagattctcaacatggaggctctctacagaaataataaa
gctcagatctcccccctgaaaacattactggagattattgtgaagcatcacattgagggc
cttaagaaggaccagatcaccagcagtaagagtgatcccctgcagtcggctcgagccgtg
agcgtgattgctaattctcctgcagtaatgtcaccaggggtgaatgacacaaggccggag
gatagcacagcttttgtgatcagcaaacatgtcaaattgaggtccgatataggagaaata
tgtccgtctaaacctatatatacatcattattgcctgagacggatggactgtccagtcag
aatcaaacaagtatctggtcttatgactcagaagaccataaacgccagccactgttggct
tccctccaggacaacgagagcttcatcagaagagaaccagagaaaaagtcttccaccact
gagagcacccaaaggagcagaactaatcgaattagacgtggcatgattgctggaccaata
tctagcacatgtcaggagtcaaacaaaagaaggcagaatcgaaggctcgaagtgccccag
cagcagcttagaaaagaagaagaaaacaagcagtctagggatggacttttagtgactggc
acacatcaaaaaagctcagagagcagcctaactgcaatcaactcagctgactgctcagga
gggcaatgggagttgtggagtgcaccagacagattgcagagggaaatcagctttgaaaaa
gtgcaaaaagacatactgataactacaaaagcaaagtctttcagcaggccgaatgtggct
gatttggatgttgctgagatggttttagatgacattgatgatgatgaggatctgcgagaa
ctctccaaagtgtcctttcagagaaccgtcgctgaacccagctatgcaggccgcccgatg
gaccagcacactgccatggaattgaaagcgattcttattggttccagacaaaattgtttc
agtgttgagtggaggaatcagggtttcaccttctcagaaacacatgacctgagatatgga
attgtgcagaaaaagggtggtccttgtggagttctggcatccatccaagcctttgttcta
aagaaaatgctgtttgaaaacattgaaagcagtaattcagtccttcagaggttaagacct
tccaacacaaccagaagaaagtgtctggctttagcggccgctgaaatactgtggagggct
ggcggtgaaaaacaagccacgattgcaataaattcagggagaaatcatttcaccccaact
ggatactacaaatctgaaggagtgcttgaaaagataacatgtttcacagtggataaaatc
aaagacctgcatttccttctggaacggcatattgatcagttcgagacaggggtgttggga
tgcatactactcaccatatctgcacttctctcccgatccattgaaaaagtaagagaggat
atggacgtgcccaccaacacactcatcggagcccacggctactgcactcaggagctggtc
aacctgttgctctttggcagagcagtttctaatgtctttgacaatgacatggagttggac
tcaggcaatggcaacatgactctactgaagggagtgaaaggccactgtgacgttggcctg
ctgtccttgttcgaacactataacatctgtaaggtaggagcttacctgaagtctccccgt
taccccatttgggtggtgtgcagtgaaagccacttcagcgtgctgtttggcctgcagagg
gagctgttgaccaatcaggaccaaagcctggagtttgatctttactattacgatggactg
gccaatcaacaggaggagatccgcctcactgtcgctgttggcgaatcggccctgagctgt
caagatgtccacactgatctcattcctccactggagcactgtatccgaacaaggtggaaa
gatgcatttgtcaactggaatgacacagagcctattctctga
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