Anoplopoma fimbria (sablefish): 129094303
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Entry
129094303 CDS
T09102
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129094303 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129094303 (rexo1)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
RNases
129094303 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
KIAA1549_1st
Motif
Other DBs
NCBI-GeneID:
129094303
NCBI-ProteinID:
XP_054458387
LinkDB
All DBs
Position
8
Genome browser
AA seq
1270 aa
AA seq
DB search
MLKSTGFFRGIDCPFYAEYSEGKGSRNGCNRPYCHFRHSQQRRASYGAPADVKKQRDLHS
AEKEQGYDPFNPEVVRPQEKENGKSAGSGDLSGALELVNKAIEEVRSEVEREKRKLSRIG
DEPYNPSQKKKVSSSDAVKSKPPPSHMAYDPGSYQITSVGYNPTPGCSKYTLDSDKQGNN
SNSMEYVPTSVRKPLSRTHTHQLPSPPPSPKYSTSTSSSKCKYTVDNSKPSTDMEYDPLS
NYSAGIAAKSKKDRRAQAVKAELRKTHKLSDKSDEEYVVAVKKTRQQSVDLKKYTFSDSD
GESSGTEYRPALLSSLQQRKGNSGSLWEAVGKEREERPESKLNALTLRNKEDLAEDSDSQ
EEIKEKDSLEKKKVASQTSHEKSGKSEKVHKVGKEANKTTGSKTSSSSSSSKDNGSIKKP
NQDYAKKENKTHGKRDDRKNSVKVKTPDQVQREGRDKTRSDGKIKSVEKVKMDGSKRDRD
AENGARESKKPKLLEKEKDQIKYKDRQHKNGKLDSSKREKDAKKINKSSSSSMSSSSNIK
ESSANSKDKVKQNISSPNRKKRLEEKRRSLSLSHVDLFGDESPEEVEPMVVDDDDDDDDD
EVLVRKSADALKRGRLNKRKASELTPSSSDDEGDHGVEGSASGNDEVDDVAINFSSFQED
LDFDSDPMEECLRIFNESKDVKTEDKGRQTKQPSRLAEEEESTESTLTTLFPGQKKRVSH
FGAKGSTDSAAVARPYRRLSAQEVCYQRMQMAQQQAAQISASVTAASQSSSPFSGDRKRV
AHRPFPQTTSSKTNVKPAASRVSSPSQIQQAVKAQTTAGILPKTVTTVTQRRVAHTPTMK
SSSMKRPVIPIEFGAKVPNNIRQRYLTTFIDECVKFCPSKDVAFQMALDEEKLVYERSSS
KSIYLNVAVNALKKLRSKSISGPSPVPKDPGLVVNRRALSHEELLGGRHAAKTSFTVNRT
GKQLEEKLTGATLYRKLTAYLMTEEQLQEHGYPRTNPEAAGKAIMYNLPEKKAITDPLNK
ICCRCGAEYKINVNGNCIRKEECCFHWGRLRKNKGAGGWETNYSCCAAAVGAPGCQVCKQ
HVQDGRKETFDGYVTTFSKALPPDGNGGVFALDCEMCYTKQGLELTRVTVIDSELKVIYD
TFVKPESKVVDYNTRFSGVTEEDLESATITLRDVQAVLLSMFSAESILIGHSLESDLLAL
KLIHSTVVDTAIVFPHRIGLPYKRALRNLMAEHLKRIIQDNVEGHDSSEDASACMELMFW
KIKEDAKVKR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaatccaccggcttcttccgagggattgactgcccgttttacgccgaatacagc
gagggtaaaggaagcagaaatgggtgtaatagaccgtactgccacttcaggcacagccag
cagagacgggcgtcctacggagcaccagcagatgttaagaagcagagagaccttcactcc
gcagagaaagaacaaggttatgatcccttcaacccagaagtcgtgaggccccaggagaag
gagaatggaaagtctgctggctcgggagacctcagcggggccctggagctggtcaacaag
gccatcgaggaggtccgcagcgaggtggagagggagaagaggaagctctctcggattggg
gatgaaccatataatcccagccagaaaaaaaaagtgtcttcttctgatgctgttaaaagt
aaacctcccccttcacacatggcatatgaccctgggagctatcagatcacatctgtaggt
tataatccaacccctggctgcagcaagtataccttggattcagacaagcaggggaacaat
agtaactccatggaatatgttcctacttcagtgagaaagcctttatctcggacacacaca
catcaactcccctcgccaccccccagtcccaagtactcaaccagcacatcctcctctaag
tgtaaatacacagtggacaattcaaaaccatctacagatatggagtatgatccgttgtcc
aactactcggcaggaatagcagcgaaaagcaagaaggaccggcgtgcacaagctgttaag
gcggagctgagaaagacgcacaaactatcagataagtcggacgaggagtatgttgttgca
gtgaaaaaaacacggcagcagagtgttgatttaaaaaagtacactttctctgactctgat
ggggagagctctggaacagagtatcgacccgccttgcttagcagtctccagcagagaaaa
ggaaacagtggctcactttgggaagctgtggggaaggagagggaagagagacctgaaagt
aagctaaatgcactgacactgaggaataaagaggacttggcagaggactcagacagccag
gaagaaattaaagaaaaggacagtttagagaaaaagaaggtggctagtcaaactagtcac
gagaaaagtggcaaatctgagaaagtgcataaagttggaaaggaagctaacaaaacgact
ggcagtaagactagtagtagcagcagcagcagtaaagacaacgggtccattaagaagcca
aaccaggactatgcaaagaaggaaaacaagactcatgggaaaagagacgataggaaaaac
tcagttaaggttaagacacctgatcaagttcagagggaaggaagagacaaaacgagaagt
gatggtaagatcaaatctgtggaaaaagtaaaaatggacggaagtaaacgagatagagat
gcagaaaatggtgcaagggaaagcaagaaacccaagctattagagaaggaaaaggatcag
attaagtataaggaccgccaacacaaaaatggtaaacttgatagcagtaaaagagaaaag
gatgcaaagaaaattaataaaagcagttcaagcagcatgagcagcagtagtaacattaaa
gagagttctgcaaacagtaaagacaaggtgaagcaaaacatcagctcgccaaaccggaaa
aaaagacttgaggagaaacggcgaagcctgagcctcagccatgttgatctatttggggat
gagagcccagaggaggttgaaccgatggtggtggatgatgatgatgatgacgacgacgac
gaagtgttggtgagaaagtctgctgatgctttaaagagaggtcgtctgaacaagaggaaa
gcgtcagagctgactccgtcttcttctgacgatgagggtgaccacggcgtggagggcagt
gcgtcaggtaacgacgaggtcgacgatgttgcaatcaacttttctagtttccaggaggat
ctggactttgactcagatcccatggaggagtgtttgcggatcttcaatgaatccaaggat
gtgaagaccgaagacaagggaaggcaaactaaacagccctctaggcttgccgaggaggag
gaaagcaccgagagcactttaaccactctttttcccgggcaaaagaagagagtctcccat
tttggtgccaaaggaagtactgactctgcggctgtggcgcggccgtacaggagactctca
gcccaggaggtctgctaccagcgaatgcagatggctcagcagcaagctgctcagatctct
gcttcagtcacagctgcctcccaaagctccagccccttttctggagacaggaagagagta
gctcaccgtcccttcccacagacaacatcctccaaaacaaatgttaaaccagctgccagt
cgagtttcatcccccagccagatccagcaggctgtcaaggcccaaaccacagctggcatc
ttgcccaagactgtaaccacagtcacgcagaggagggtggcacacacacccaccatgaag
agtagttcaatgaagcgccccgtcatccccattgagtttggggccaaggttcccaacaac
atccgtcagcgctacctcaccactttcatagatgaatgtgtcaaattttgcccatcaaag
gacgttgccttccagatggcacttgacgaggagaagctggtgtatgagcgcagtagcagt
aagagcatctacctcaatgtagcggtcaacgccctaaagaagctccgcagcaagagcatc
tccggtccatcgcctgtccccaaggacccggggttagtggtcaacaggagggctctgtcc
cacgaagagcttctgggaggtcgtcatgctgctaaaaccagcttcactgtcaacaggacc
ggtaaacagctggaagagaaactcactggagccacactgtacaggaagctgacggcgtac
ttaatgacggaggagcagctccaggagcacggatacccgagaacaaacccagaggctgcc
ggcaaagccatcatgtacaacctcccggagaaaaaggccatcacagacccattaaacaag
atatgctgtcgatgtggagccgagtataagatcaatgtcaatggcaactgtatacggaaa
gaggaatgttgctttcactggggacgtttgcgcaaaaataaaggcgccggaggctgggag
accaactacagctgctgtgctgcggctgtcggagctccaggttgccaagtttgcaagcaa
catgttcaggacgggcgtaaagagacattcgatggctacgtcacaacttttagtaaagct
ctaccaccagatggcaatggaggggtgtttgctttggactgtgagatgtgttacacaaag
cagggcctggagctgaccagggtgacggtcatcgactctgagttgaaagtcatctacgat
acatttgtcaaacccgaaagcaaagtggtcgattacaacacgcgattttcaggtgtgacg
gaggaggacttggagagcgccaccatcactctgagagatgttcaggccgtgctgctcagt
atgttcagtgctgaatccatcctcataggacacagtctggagagcgatctcctcgctctg
aagctaatccacagtacggtcgtagacacagccattgtgttccctcaccgcatcggcttg
ccctacaaacgtgccttgaggaacctgatggccgagcacctgaaacgcatcatccaggac
aacgtggagggccatgactcgagtgaagatgcgtctgcctgcatggagctgatgttctgg
aagatcaaggaggatgcaaaggtcaaaagatga
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integrated database retrieval system
