Anoplopoma fimbria (sablefish): 129094322
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Entry
129094322 CDS
T09102
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094322 (hps3)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
129094322 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
129094322
NCBI-ProteinID:
XP_054458416
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All DBs
Position
8:8965038..8981637
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AA seq
1080 aa
AA seq
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MVHVYNCHPFSAQQIVQVEQEPGLICCGGGALFVVATGGCKVEAYSVEKEGCPFICRFAT
MGTVKSIQHSKIGDYLVTIEEKNSATYLRAYTNWRHQAEGKARVGVRLLGHLLRGASVRV
GVQMEIIEIPLSESPVAVACCSVTGDLLVGCENTLVLFALRRQNQHSLKQQNQSQLQSTW
TNSQQSSSQSQGQIVGSNQNFLDFERSVILHLPKIKPKQVALCGGYVAVQAELEVLVLKL
DASSEPETLEESSDTKKADHLEDPADFLLLPRHQELLGDRAKDCDIPVSIEKTGLEDGTG
QYTLSYVLFRRFTPDFFQGCSVEETQLHSLQLYPLFTSHQAGSLEEPSCIFCFFSLPSAG
YLYSLKGGVELLSAYQYPEKVLKAVLTDHLLHVITKNALQCFTVRCAAVATRVEDPYIDT
TMKACPPSGLEVCALRMQLFIGLRSVCVYGRHVMLLSTADAEAPEEPERTTQRRGLELKD
HTLLTGIFLAVGIDPATTPALESFLSRPFLGRKWTISSPKETSTAGHGWNLYVVDTVSPL
TLYQEMVEYSQRYAETNPQAQSLRHLLSEAHLLLRTSLLQTSEQQRSTEEDSAPSLQTGT
DGPAERQTAEQTDRQELEEALRQNCAQLGDCFSRGSQKDCHLALPYYRMSGLSVTEIITR
NRPLPSSPHSYGPGFLFYLKHYLFEETEQILSQEVADEVIDIFSQSEPSELVSVCASPSL
INISPAQTLRILQHLEDTAGVSVPLTTTMATMMLRLDDLPQYTHLMERHAEMLLVYGFIE
EPRLLLHGGVRGQYTHIRPTALTRQLAKSQPGLLVAAMVALHENNKVQLEQADHIFKELG
CENCLQVDFWEAMLMASSQETIIQELLFRVASVYIDRLTNTTSDTNANKLQTPSRRRPLK
SADDLINSCSHYGALSPWLTVLNPAHTTSSQHQEALFKLQSLLCGPSLSVGSVVPLMERL
SEETLWGFSLHLLCATRRGQYDISIEKLLDRCPQAIIAYANHQLQDKHMVLWWQKLLPEL
CNRTRAAADNSILLAALKETLVVVAMETSPTEFLELMPDDGTASYFLPYLLTCSQRHLLA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgccatcctttctccgcacagcagatagtacaggtggagcag
gagcctggactgatctgctgtggaggtggagccctgttcgtggtggctactgggggatgc
aaggtggaggcctacagtgtggagaaggagggctgccctttcatctgtcgctttgccacc
atgggcactgtgaagagcattcagcacagcaagataggagattacctggtgaccattgag
gaaaagaacagcgccacctacctgagagcctacaccaactggcgccaccaggcggagggg
aaggcccgtgtcggggtgcgtttgttgggccacctgctgcgtggggcgtctgtgcgggtc
ggagtgcagatggagatcattgagatccctctatcagagtctcctgttgccgtggcgtgt
tgctcagtaacaggagaccttctggtcggctgcgagaacactctggttctgtttgctttg
aggagacaaaaccagcatagcctgaaacagcagaatcaaagtcagcttcagagcacctgg
acgaactctcagcagagctccagtcagagtcaaggtcagatcgtaggttcaaaccagaac
ttcctggattttgaacgctcagttatcctgcatcttcctaaaatcaagcctaaacaggtg
gcgctgtgtggaggatatgtagcggtccaggcggagctggaagtgctggttctgaaactg
gacgcatcttctgagcctgaaaccctggaagaatcatcagacacaaagaaagcagatcat
ctggaagacccggctgactttctgctccttccaagacaccaggagttgctcggtgatcga
gccaaagactgtgacatccctgtcagcatagaaaagactgggctggaggacggaacagga
caatacacactgtcatatgttctcttcaggcgttttactccagacttcttccagggctgc
agtgtggaggagactcaactccactccctacagctctacccgctgttcaccagtcaccag
gcagggtctctggaagaaccatcatgcatattctgcttcttctctctcccctccgccggc
tacctgtacagtctgaagggtggtgtcgagcttctctcggcctatcagtatccagagaag
gtcctgaaggcggtgctaacggaccacctgttgcacgtcataacaaagaatgcgttgcag
tgtttcaccgtgcgctgtgcagcagtagcaaccagggttgaagacccctacatcgatacc
accatgaaggcctgtccaccttcaggcctggaggtgtgtgcgctcaggatgcagctgttc
attggtctgcgctcagtgtgtgtctacggccgccatgttatgctgctctccaccgccgac
gcagaggcaccagaggaaccagaacgcactacacaacgcagaggccttgagttgaaagat
cacaccttgctgactggtattttcctggcggtgggaatcgatcccgcaaccacgccggct
ctggagagcttcctttcacgccccttccttggcaggaagtggacaatctcttcccccaaa
gaaaccagcactgcaggacacggatggaacctctatgtggtcgacaccgtctcccccctc
actctttaccaagaaatggttgaatacagtcagcggtatgcagagaccaacccgcaggct
caaagccttcggcacctcctgagtgaagctcacctcctcctccgcacctccttactccaa
acatcagagcagcaacgaagcactgaggaagactctgcgccgtctctgcagacaggtaca
gatggaccagctgagagacagacagctgaacagacagacaggcaagaactagaggaggca
ctcaggcagaactgtgcacagctgggagactgtttcagcaggggcagtcagaaggactgc
catctggctctgccgtactacaggatgtctggtctgtcagtcacagaaatcattaccagg
aacaggccgcttcccagcagccctcactcctacggccccggcttcctcttctacctgaag
cattacctgtttgaagaaacagagcagattctcagtcaggaggtagctgatgaggtcata
gacattttcagccaatcagagccctcagagctcgtcagtgtgtgtgccagcccgtccctg
ataaacatcagtcctgcccagacgctgcgaatcttacaacatctggaagacacagctggc
gtgtctgttcctttgacaaccaccatggcaaccatgatgttgcgtttggacgacctgcca
cagtacacacatctgatggaaagacacgctgagatgctgctggtgtacgggttcatcgag
gagccgaggctgttgctgcacggcggggttagaggccagtacacacacatccgtcccaca
gccttgacccgccaattggcaaagtcccaaccaggactgctggtggctgccatggtggct
ttacatgaaaacaacaaagtccagctggaacaggctgatcacatattcaaggagctgggc
tgtgagaactgcttacaggtggatttctgggaggcgatgctcatggcgtcctcccaggaa
actatcatccaggaacttctgttccgagtggcgtctgtctacatcgaccgactgacaaat
acaacctcggatacaaacgccaacaaactacagacaccttcaagacgcaggccactaaag
agcgctgatgatctgataaactcgtgctcccattatggtgctctgtccccgtggctgact
gttctcaacccagcacacaccaccagctcacaacaccaggaggcgctcttcaaactgcag
tctctcctttgtggtccgtccctgtctgttggctccgtcgtgcctctgatggagcgtctt
tcagaggaaaccttatggggcttcagcctgcacctcctctgcgccaccagaagggggcag
tacgacattagcattgaaaagctgctggaccgatgtcctcaggccatcatagcctacgct
aaccaccagttacaagacaaacatatggtgttatggtggcagaagctgctcccagagctt
tgtaacaggacgagagctgccgcagacaacagcatcctattggctgctctcaaagagacg
ctggtagtggttgccatggagacgagccccacagagttcctggaactgatgcctgatgac
ggcactgcctcatacttcctgccttacctgttgacatgtagccagagacacctgctggcc
tga
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